RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 LNPKQ9C0E8 428 aa13.47□□□□□ -0.25
CLIP4-204ENST00000404424 WASLO00401 505 aaPredicted RBP13.46□□□□□ -0.25
CLIP4-204ENST00000404424 HMOX1P09601 288 aa13.46□□□□□ -0.26
CLIP4-204ENST00000404424 FAM43AQ8N2R8 423 aa13.46□□□□□ -0.26
CLIP4-204ENST00000404424 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.26
CLIP4-204ENST00000404424 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.26
CLIP4-204ENST00000404424 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.26
CLIP4-204ENST00000404424 ABCC4O15439 1325 aa13.45□□□□□ -0.26
CLIP4-204ENST00000404424 CFAP44Q96MT7 982 aa13.45□□□□□ -0.26
CLIP4-204ENST00000404424 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
CLIP4-204ENST00000404424 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLIP4-204ENST00000404424 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
CLIP4-204ENST00000404424 EMILIN1Q9Y6C2 1016 aa13.45□□□□□ -0.26
CLIP4-204ENST00000404424 NCOA3Q9Y6Q9 1424 aa13.45□□□□□ -0.26
CLIP4-204ENST00000404424 EIF5BO60841 1220 aaKnown RBP13.44□□□□□ -0.26
CLIP4-204ENST00000404424 FBLN1P23142 703 aa13.44□□□□□ -0.26
CLIP4-204ENST00000404424 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
CLIP4-204ENST00000404424 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
CLIP4-204ENST00000404424 MBIPQ9NS73 344 aa13.44□□□□□ -0.26
CLIP4-204ENST00000404424 ANKRD45Q5TZF3 282 aa13.44□□□□□ -0.26
CLIP4-204ENST00000404424 TWISTNBQ3B726 338 aaPredicted RBP13.43□□□□□ -0.26
CLIP4-204ENST00000404424 TSPYL6Q8N831 410 aa13.43□□□□□ -0.26
CLIP4-204ENST00000404424 COG3Q96JB2 828 aa13.43□□□□□ -0.26
CLIP4-204ENST00000404424 CIZ1Q9ULV3 898 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-204ENST00000404424 DDX11L8A8MPP1 907 aa13.42□□□□□ -0.26
CLIP4-204ENST00000404424 DDIT3P35638 169 aa13.42□□□□□ -0.26
CLIP4-204ENST00000404424 NME9Q86XW9 330 aa13.42□□□□□ -0.26
CLIP4-204ENST00000404424 THUMPD2Q9BTF0 503 aaKnown RBP13.42□□□□□ -0.26
CLIP4-204ENST00000404424 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
CLIP4-204ENST00000404424 HAP1P54257 671 aaPredicted RBP13.41□□□□□ -0.26
CLIP4-204ENST00000404424 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
CLIP4-204ENST00000404424 GOLGA6L3A6NEY3 463 aa13.41□□□□□ -0.26
CLIP4-204ENST00000404424 NUDT16Q96DE0 195 aaKnown RBP13.41□□□□□ -0.26
CLIP4-204ENST00000404424 FSD2A1L4K1 749 aa13.4□□□□□ -0.26
CLIP4-204ENST00000404424 TECPR2O15040 1411 aa13.4□□□□□ -0.26
CLIP4-204ENST00000404424 NRXN3Q9Y4C0 1643 aa13.4□□□□□ -0.26
CLIP4-204ENST00000404424 TRAK2O60296 914 aa13.4□□□□□ -0.26
CLIP4-204ENST00000404424 HDGFP51858 240 aaKnown RBP13.4□□□□□ -0.26
CLIP4-204ENST00000404424 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
CLIP4-204ENST00000404424 KNDC1Q76NI1 1749 aa13.4□□□□□ -0.27
CLIP4-204ENST00000404424 FAM69CQ0P6D2 419 aa13.39□□□□□ -0.27
CLIP4-204ENST00000404424 SIRT2Q8IXJ6 389 aa13.39□□□□□ -0.27
CLIP4-204ENST00000404424 DLG5Q8TDM6 1919 aa13.39□□□□□ -0.27
CLIP4-204ENST00000404424 METP08581 1390 aa13.38□□□□□ -0.27
CLIP4-204ENST00000404424 ELL2O00472 640 aaPredicted RBP13.38□□□□□ -0.27
CLIP4-204ENST00000404424 C8orf58Q8NAV2 365 aa13.38□□□□□ -0.27
CLIP4-204ENST00000404424 C1orf115Q9H7X2 142 aa13.38□□□□□ -0.27
CLIP4-204ENST00000404424 ISY1Q9ULR0 285 aaKnown RBP13.38□□□□□ -0.27
CLIP4-204ENST00000404424 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
CLIP4-204ENST00000404424 PTMSP20962 102 aa13.38□□□□□ -0.27
CLIP4-204ENST00000404424 TBC1D9Q6ZT07 1266 aa13.38□□□□□ -0.27
CLIP4-204ENST00000404424 DIP2BQ9P265 1576 aa13.38□□□□□ -0.27
CLIP4-204ENST00000404424 CPS1P31327 1500 aa13.38□□□□□ -0.27
CLIP4-204ENST00000404424 ANO8Q9HCE9 1232 aaPredicted RBP13.37□□□□□ -0.27
CLIP4-204ENST00000404424 C3P01024 1663 aa13.37□□□□□ -0.27
CLIP4-204ENST00000404424 AKAP12Q02952 1782 aa13.37□□□□□ -0.27
CLIP4-204ENST00000404424 RRS1Q15050 365 aaKnown RBP13.37□□□□□ -0.27
CLIP4-204ENST00000404424 TXNDC2Q86VQ3 553 aa13.37□□□□□ -0.27
CLIP4-204ENST00000404424 KIF2CQ99661 725 aa13.37□□□□□ -0.27
CLIP4-204ENST00000404424 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
CLIP4-204ENST00000404424 CDC45O75419 566 aa13.36□□□□□ -0.27
CLIP4-204ENST00000404424 INTS3Q68E01 1043 aaKnown RBP13.36□□□□□ -0.27
CLIP4-204ENST00000404424 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLIP4-204ENST00000404424 GBP4Q96PP9 640 aa13.36□□□□□ -0.27
CLIP4-204ENST00000404424 DCTPP1Q9H773 170 aa13.36□□□□□ -0.27
CLIP4-204ENST00000404424 ITSN1Q15811 1721 aa13.35□□□□□ -0.27
CLIP4-204ENST00000404424 NRKQ7Z2Y5 1582 aa13.35□□□□□ -0.27
CLIP4-204ENST00000404424 RAB3GAP1Q15042 981 aa13.35□□□□□ -0.27
CLIP4-204ENST00000404424 CYB5RLQ6IPT4 315 aa13.35□□□□□ -0.27
CLIP4-204ENST00000404424 K7ELQ4 463 aaPredicted RBP13.35□□□□□ -0.27
CLIP4-204ENST00000404424 MRE11P49959 708 aa13.35□□□□□ -0.27
CLIP4-204ENST00000404424 FAM83GA6ND36 823 aa13.34□□□□□ -0.27
CLIP4-204ENST00000404424 RPAP2Q8IXW5 612 aaPredicted RBP13.34□□□□□ -0.27
CLIP4-204ENST00000404424 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
CLIP4-204ENST00000404424 SKOR2Q2VWA4 1001 aaPredicted RBP13.34□□□□□ -0.27
CLIP4-204ENST00000404424 PLEKHM2Q8IWE5 1019 aa13.34□□□□□ -0.27
CLIP4-204ENST00000404424 TNPO1Q92973 898 aaKnown RBP13.34□□□□□ -0.27
CLIP4-204ENST00000404424 GZF1Q9H116 711 aaPredicted RBP13.33□□□□□ -0.28
CLIP4-204ENST00000404424 CHL1O00533 1208 aa13.33□□□□□ -0.28
CLIP4-204ENST00000404424 HSP90AA1P07900 732 aaKnown RBP13.33□□□□□ -0.28
CLIP4-204ENST00000404424 ANKRD44Q8N8A2 993 aa13.33□□□□□ -0.28
CLIP4-204ENST00000404424 PTPRCP08575 1304 aa13.32□□□□□ -0.28
CLIP4-204ENST00000404424 DCTN1Q14203 1278 aa13.32□□□□□ -0.28
CLIP4-204ENST00000404424 EIF4A2Q14240 407 aaKnown RBP13.32□□□□□ -0.28
CLIP4-204ENST00000404424 NCKAP5LQ9HCH0 1330 aa13.32□□□□□ -0.28
CLIP4-204ENST00000404424 MLECQ14165 292 aa13.32□□□□□ -0.28
CLIP4-204ENST00000404424 SULT6B1Q6IMI4 303 aa13.32□□□□□ -0.28
CLIP4-204ENST00000404424 ESF1Q9H501 851 aaKnown RBP13.32□□□□□ -0.28
CLIP4-204ENST00000404424 PRR36Q9H6K5 1346 aa13.31□□□□□ -0.28
CLIP4-204ENST00000404424 GSPT1P15170 499 aaKnown RBP13.31□□□□□ -0.28
CLIP4-204ENST00000404424 TTC22Q5TAA0 569 aa13.31□□□□□ -0.28
CLIP4-204ENST00000404424 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
CLIP4-204ENST00000404424 TSPOAP1O95153 1857 aa13.3□□□□□ -0.28
CLIP4-204ENST00000404424 OVOS2A0A0J9YW53 1432 aa13.3□□□□□ -0.28
CLIP4-204ENST00000404424 RGS12O14924 1447 aa13.3□□□□□ -0.28
CLIP4-204ENST00000404424 OVOS2Q6IE36 1432 aa13.3□□□□□ -0.28
CLIP4-204ENST00000404424 RABEP1Q15276 862 aa13.3□□□□□ -0.28
CLIP4-204ENST00000404424 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
CLIP4-204ENST00000404424 PLEKHG3A1L390 1219 aa13.3□□□□□ -0.28
CLIP4-204ENST00000404424 CD2BP2O95400 341 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms