RNA–Protein interactions for RNA: ENST00000403810.5

TSC1-202, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene TSC1, Length 1,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-202ENST00000403810 USP31Q70CQ4 1352 aa20.26■□□□□ 0.83
TSC1-202ENST00000403810 ANKRD26Q9UPS8 1709 aa20.25■□□□□ 0.83
TSC1-202ENST00000403810 MTHFSP49914 203 aa20.25■□□□□ 0.83
TSC1-202ENST00000403810 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
TSC1-202ENST00000403810 SOX12O15370 315 aa20.24■□□□□ 0.83
TSC1-202ENST00000403810 GGNBP2Q9H3C7 697 aa20.24■□□□□ 0.83
TSC1-202ENST00000403810 KIF20BQ96Q89 1820 aa20.24■□□□□ 0.83
TSC1-202ENST00000403810 C8orf37Q96NL8 207 aa20.23■□□□□ 0.83
TSC1-202ENST00000403810 NFAT5O94916 1531 aa20.23■□□□□ 0.83
TSC1-202ENST00000403810 APAF1O14727 1248 aa20.22■□□□□ 0.83
TSC1-202ENST00000403810 FYB1O15117 783 aa20.22■□□□□ 0.83
TSC1-202ENST00000403810 KIAA0232Q92628 1395 aa20.22■□□□□ 0.83
TSC1-202ENST00000403810 GCP02774 474 aa20.22■□□□□ 0.83
TSC1-202ENST00000403810 TNNT2P45379 298 aaPredicted RBP20.22■□□□□ 0.83
TSC1-202ENST00000403810 SLFN5Q08AF3 891 aa20.22■□□□□ 0.83
TSC1-202ENST00000403810 DUSP27Q5VZP5 1158 aa20.22■□□□□ 0.83
TSC1-202ENST00000403810 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
TSC1-202ENST00000403810 TRMT2AQ8IZ69 625 aaKnown RBP20.22■□□□□ 0.83
TSC1-202ENST00000403810 RUNDC1Q96C34 613 aa20.22■□□□□ 0.83
TSC1-202ENST00000403810 ZC3H6P61129 1189 aaKnown RBP20.21■□□□□ 0.83
TSC1-202ENST00000403810 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
TSC1-202ENST00000403810 COG3Q96JB2 828 aa20.2■□□□□ 0.82
TSC1-202ENST00000403810 E9PSI1 815 aa20.19■□□□□ 0.82
TSC1-202ENST00000403810 PRDM11Q9NQV5 511 aa20.18■□□□□ 0.82
TSC1-202ENST00000403810 AFF2P51816 1311 aa20.18■□□□□ 0.82
TSC1-202ENST00000403810 CHRNA2Q15822 529 aa20.17■□□□□ 0.82
TSC1-202ENST00000403810 NGLY1Q96IV0 654 aa20.17■□□□□ 0.82
TSC1-202ENST00000403810 CCDC136Q96JN2 1154 aa20.17■□□□□ 0.82
TSC1-202ENST00000403810 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
TSC1-202ENST00000403810 CPDO75976 1380 aa20.17■□□□□ 0.82
TSC1-202ENST00000403810 PLCH1Q4KWH8 1693 aa20.17■□□□□ 0.82
TSC1-202ENST00000403810 ZBTB7CA1YPR0 619 aa20.17■□□□□ 0.82
TSC1-202ENST00000403810 SLIT2O94813 1529 aa20.16■□□□□ 0.82
TSC1-202ENST00000403810 FAM83GA6ND36 823 aa20.16■□□□□ 0.82
TSC1-202ENST00000403810 FBLN1P23142 703 aa20.15■□□□□ 0.82
TSC1-202ENST00000403810 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
TSC1-202ENST00000403810 KCNH5Q8NCM2 988 aa20.15■□□□□ 0.82
TSC1-202ENST00000403810 COL14A1Q05707 1796 aaKnown RBP20.15■□□□□ 0.82
TSC1-202ENST00000403810 RGS17Q9UGC6 210 aaPredicted RBP20.14■□□□□ 0.81
TSC1-202ENST00000403810 COL3A1P02461 1466 aaPredicted RBP20.13■□□□□ 0.81
TSC1-202ENST00000403810 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.13■□□□□ 0.81
TSC1-202ENST00000403810 LMO7Q8WWI1 1683 aa20.13■□□□□ 0.81
TSC1-202ENST00000403810 BCL9LQ86UU0 1499 aa20.13■□□□□ 0.81
TSC1-202ENST00000403810 ARHGEF25Q86VW2 580 aa20.12■□□□□ 0.81
TSC1-202ENST00000403810 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
TSC1-202ENST00000403810 FNBP4Q8N3X1 1017 aaPredicted RBP20.12■□□□□ 0.81
TSC1-202ENST00000403810 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
TSC1-202ENST00000403810 NRAPQ86VF7 1730 aa20.11■□□□□ 0.81
TSC1-202ENST00000403810 TCP11L2Q8N4U5 519 aa20.11■□□□□ 0.81
TSC1-202ENST00000403810 PNNQ9H307 717 aaKnown RBP20.11■□□□□ 0.81
TSC1-202ENST00000403810 BTG4Q9NY30 223 aa20.11■□□□□ 0.81
TSC1-202ENST00000403810 USP21Q9UK80 565 aa20.11■□□□□ 0.81
TSC1-202ENST00000403810 U2AF1L5P0DN76 240 aaPredicted RBP20.1■□□□□ 0.81
TSC1-202ENST00000403810 U2AF1Q01081 240 aaKnown RBP eCLIP20.1■□□□□ 0.816e-10■■■■□ 20.2
TSC1-202ENST00000403810 CAMTA1Q9Y6Y1 1673 aa20.1■□□□□ 0.81
TSC1-202ENST00000403810 NWD2Q9ULI1 1742 aa20.1■□□□□ 0.81
TSC1-202ENST00000403810 AATKQ6ZMQ8 1374 aa20.09■□□□□ 0.81
TSC1-202ENST00000403810 LTN1O94822 1766 aa20.09■□□□□ 0.81
TSC1-202ENST00000403810 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
TSC1-202ENST00000403810 MAP3K19Q56UN5 1328 aa20.09■□□□□ 0.81
TSC1-202ENST00000403810 COL18A1P39060 1754 aa20.08■□□□□ 0.81
TSC1-202ENST00000403810 EXOC6Q8TAG9 804 aa20.08■□□□□ 0.81
TSC1-202ENST00000403810 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.07■□□□□ 0.8
TSC1-202ENST00000403810 COL5A2P05997 1499 aaPredicted RBP20.07■□□□□ 0.8
TSC1-202ENST00000403810 ABCC6O95255 1503 aa20.07■□□□□ 0.8
TSC1-202ENST00000403810 ZNF772Q68DY9 489 aaPredicted RBP20.07■□□□□ 0.8
TSC1-202ENST00000403810 POTEAQ6S8J7 498 aa20.07■□□□□ 0.8
TSC1-202ENST00000403810 UNC5CLQ8IV45 518 aa20.07■□□□□ 0.8
TSC1-202ENST00000403810 AXIN2Q9Y2T1 843 aa20.07■□□□□ 0.8
TSC1-202ENST00000403810 ATRNO75882 1429 aa20.06■□□□□ 0.8
TSC1-202ENST00000403810 PEAK1Q9H792 1746 aa20.06■□□□□ 0.8
TSC1-202ENST00000403810 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
TSC1-202ENST00000403810 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
TSC1-202ENST00000403810 EMILIN1Q9Y6C2 1016 aa20.05■□□□□ 0.8
TSC1-202ENST00000403810 STRN4Q9NRL3 753 aa20.04■□□□□ 0.8
TSC1-202ENST00000403810 RBM19Q9Y4C8 960 aaKnown RBP20.03■□□□□ 0.8
TSC1-202ENST00000403810 RTL1A6NKG5 1358 aa20.03■□□□□ 0.8
TSC1-202ENST00000403810 PLEKHF1Q96S99 279 aa20.02■□□□□ 0.8
TSC1-202ENST00000403810 U2SURPO15042 1029 aaKnown RBP20.02■□□□□ 0.79
TSC1-202ENST00000403810 PLIN1O60240 522 aa20.02■□□□□ 0.79
TSC1-202ENST00000403810 HOXC9P31274 260 aa20.02■□□□□ 0.79
TSC1-202ENST00000403810 MYH16Q9H6N6 1097 aa20.02■□□□□ 0.79
TSC1-202ENST00000403810 QTRT2Q9H974 415 aaKnown RBP20.02■□□□□ 0.79
TSC1-202ENST00000403810 POLKQ9UBT6 870 aa20.02■□□□□ 0.79
TSC1-202ENST00000403810 TRPC5Q9UL62 973 aaPredicted RBP20.02■□□□□ 0.79
TSC1-202ENST00000403810 MAPK8IP3Q9UPT6 1336 aa20.01■□□□□ 0.79
TSC1-202ENST00000403810 AMPHP49418 695 aa20.01■□□□□ 0.79
TSC1-202ENST00000403810 RGPD5Q99666 1765 aa20■□□□□ 0.79
TSC1-202ENST00000403810 CDK12Q9NYV4 1490 aaPredicted RBP20■□□□□ 0.79
TSC1-202ENST00000403810 FLT4P35916 1363 aa20■□□□□ 0.79
TSC1-202ENST00000403810 GLI3P10071 1580 aa20■□□□□ 0.79
TSC1-202ENST00000403810 FCHSD2O94868 740 aa20■□□□□ 0.79
TSC1-202ENST00000403810 VPS72Q15906 364 aa20■□□□□ 0.79
TSC1-202ENST00000403810 LARP1Q6PKG0 1096 aaKnown RBP20■□□□□ 0.79
TSC1-202ENST00000403810 IP6K1Q92551 441 aa20■□□□□ 0.79
TSC1-202ENST00000403810 CRBNQ96SW2 442 aa20■□□□□ 0.79
TSC1-202ENST00000403810 ERBB3P21860 1342 aa19.99■□□□□ 0.79
TSC1-202ENST00000403810 PPM1GO15355 546 aaPredicted RBP19.99■□□□□ 0.79
TSC1-202ENST00000403810 RRP7AQ9Y3A4 280 aaKnown RBP19.99■□□□□ 0.79
TSC1-202ENST00000403810 CCDC9Q9Y3X0 531 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms