RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 ZNF335Q9H4Z2 1342 aaPredicted RBP10.82□□□□□ -0.68
CEACAM1-208ENST00000403461 A2MP01023 1474 aa10.81□□□□□ -0.68
CEACAM1-208ENST00000403461 SYCP2Q9BX26 1530 aa10.81□□□□□ -0.68
CEACAM1-208ENST00000403461 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
CEACAM1-208ENST00000403461 SAMD9LQ8IVG5 1584 aa10.81□□□□□ -0.68
CEACAM1-208ENST00000403461 PLA2R1Q13018 1463 aa10.81□□□□□ -0.68
CEACAM1-208ENST00000403461 MTUS2Q5JR59 1369 aa10.8□□□□□ -0.68
CEACAM1-208ENST00000403461 GPATCH8Q9UKJ3 1502 aaKnown RBP10.8□□□□□ -0.68
CEACAM1-208ENST00000403461 ITSN2Q9NZM3 1697 aa10.8□□□□□ -0.68
CEACAM1-208ENST00000403461 SETD1BQ9UPS6 1966 aaKnown RBP10.8□□□□□ -0.68
CEACAM1-208ENST00000403461 USP46P62068 366 aa10.8□□□□□ -0.68
CEACAM1-208ENST00000403461 PRR14Q9BWN1 585 aa10.8□□□□□ -0.68
CEACAM1-208ENST00000403461 ATP7AQ04656 1500 aa10.79□□□□□ -0.68
CEACAM1-208ENST00000403461 SH3D19Q5HYK7 790 aa10.79□□□□□ -0.68
CEACAM1-208ENST00000403461 CDC42BPBQ9Y5S2 1711 aa10.78□□□□□ -0.68
CEACAM1-208ENST00000403461 SKIV2LQ15477 1246 aaKnown RBP10.78□□□□□ -0.68
CEACAM1-208ENST00000403461 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
CEACAM1-208ENST00000403461 KIDINS220Q9ULH0 1771 aa10.77□□□□□ -0.68
CEACAM1-208ENST00000403461 PTPRKQ15262 1439 aa10.77□□□□□ -0.68
CEACAM1-208ENST00000403461 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
CEACAM1-208ENST00000403461 MROH2AA6NES4 1674 aa10.76□□□□□ -0.69
CEACAM1-208ENST00000403461 TCOF1Q13428 1488 aaKnown RBP10.76□□□□□ -0.69
CEACAM1-208ENST00000403461 FUT2Q10981 343 aa10.76□□□□□ -0.69
CEACAM1-208ENST00000403461 GRIPAP1Q4V328 841 aa10.76□□□□□ -0.69
CEACAM1-208ENST00000403461 CEP170BQ9Y4F5 1589 aaPredicted RBP10.75□□□□□ -0.69
CEACAM1-208ENST00000403461 HOXA2O43364 376 aa10.75□□□□□ -0.69
CEACAM1-208ENST00000403461 TOM1O60784 492 aa10.75□□□□□ -0.69
CEACAM1-208ENST00000403461 APLP1P51693 650 aa10.75□□□□□ -0.69
CEACAM1-208ENST00000403461 Q6ZNB5 142 aa10.75□□□□□ -0.69
CEACAM1-208ENST00000403461 A2ML1A8K2U0 1454 aa10.74□□□□□ -0.69
CEACAM1-208ENST00000403461 PLXNC1O60486 1568 aa10.74□□□□□ -0.69
CEACAM1-208ENST00000403461 MOXD2PA6NHM9 499 aa10.74□□□□□ -0.69
CEACAM1-208ENST00000403461 GJA5P36382 358 aa10.74□□□□□ -0.69
CEACAM1-208ENST00000403461 ATP6V1AP38606 617 aa10.74□□□□□ -0.69
CEACAM1-208ENST00000403461 PCMTD1Q96MG8 357 aaPredicted RBP10.74□□□□□ -0.69
CEACAM1-208ENST00000403461 POLR3EQ9NVU0 708 aa10.74□□□□□ -0.69
CEACAM1-208ENST00000403461 INO80Q9ULG1 1556 aaPredicted RBP10.73□□□□□ -0.69
CEACAM1-208ENST00000403461 MYO3AQ8NEV4 1616 aa10.73□□□□□ -0.69
CEACAM1-208ENST00000403461 SPTLC1O15269 473 aa10.73□□□□□ -0.69
CEACAM1-208ENST00000403461 CLK2P49760 499 aaKnown RBP10.73□□□□□ -0.69
CEACAM1-208ENST00000403461 PIP4K2BP78356 416 aa10.73□□□□□ -0.69
CEACAM1-208ENST00000403461 RIC3Q7Z5B4 369 aa10.73□□□□□ -0.69
CEACAM1-208ENST00000403461 DHX29Q7Z478 1369 aaKnown RBP10.73□□□□□ -0.69
CEACAM1-208ENST00000403461 TNRQ92752 1358 aa10.73□□□□□ -0.69
CEACAM1-208ENST00000403461 RTEL1-TNFRSF6BF6WH68 1400 aa10.73□□□□□ -0.69
CEACAM1-208ENST00000403461 CDC42BPAQ5VT25 1732 aa10.72□□□□□ -0.69
CEACAM1-208ENST00000403461 LRRIQ1Q96JM4 1722 aa10.72□□□□□ -0.69
CEACAM1-208ENST00000403461 KIF3BO15066 747 aa10.72□□□□□ -0.69
CEACAM1-208ENST00000403461 NDUFV2P19404 249 aa10.72□□□□□ -0.69
CEACAM1-208ENST00000403461 RSBN1LQ6PCB5 846 aaPredicted RBP10.72□□□□□ -0.69
CEACAM1-208ENST00000403461 ANKLE2Q86XL3 938 aa10.72□□□□□ -0.69
CEACAM1-208ENST00000403461 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
CEACAM1-208ENST00000403461 CPS1P31327 1500 aa10.71□□□□□ -0.69
CEACAM1-208ENST00000403461 TJAP1Q5JTD0 557 aa10.71□□□□□ -0.69
CEACAM1-208ENST00000403461 THEMISQ8N1K5 641 aaPredicted RBP10.71□□□□□ -0.69
CEACAM1-208ENST00000403461 SUPT6HQ7KZ85 1726 aaKnown RBP10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 ZNF142P52746 1687 aaPredicted RBP10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 CLTCQ00610 1675 aaKnown RBP10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 ZNF644Q9H582 1327 aaPredicted RBP10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 HSPA1LP34931 641 aa10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 TUSC1Q2TAM9 212 aa10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 MORN1Q5T089 497 aa10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 PROCA1Q8NCQ7 364 aaPredicted RBP10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 MTRQ99707 1265 aa10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 LIMD1Q9UGP4 676 aa10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 PCDHB3Q9Y5E6 796 aa10.7□□□□□ -0.7
CEACAM1-208ENST00000403461 EHBP1L1Q8N3D4 1523 aa10.69□□□□□ -0.7
CEACAM1-208ENST00000403461 FAM135AQ9P2D6 1515 aa10.69□□□□□ -0.7
CEACAM1-208ENST00000403461 MBD5Q9P267 1494 aa10.69□□□□□ -0.7
CEACAM1-208ENST00000403461 CEP162Q5TB80 1403 aa10.69□□□□□ -0.7
CEACAM1-208ENST00000403461 TSPY4P0CV99 314 aa10.69□□□□□ -0.7
CEACAM1-208ENST00000403461 TSPY10P0CW01 314 aa10.69□□□□□ -0.7
CEACAM1-208ENST00000403461 FDX1P10109 184 aa10.69□□□□□ -0.7
CEACAM1-208ENST00000403461 PZPP20742 1482 aa10.68□□□□□ -0.7
CEACAM1-208ENST00000403461 CCDC141Q6ZP82 1450 aa10.68□□□□□ -0.7
CEACAM1-208ENST00000403461 PUS10Q3MIT2 529 aaKnown RBP10.68□□□□□ -0.7
CEACAM1-208ENST00000403461 FBXO31Q5XUX0 539 aaPredicted RBP10.68□□□□□ -0.7
CEACAM1-208ENST00000403461 HLA-CQ95604 372 aa10.68□□□□□ -0.7
CEACAM1-208ENST00000403461 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.68□□□□□ -0.7
CEACAM1-208ENST00000403461 IL21Q9HBE4 155 aa10.68□□□□□ -0.7
CEACAM1-208ENST00000403461 KDM5DQ9BY66 1539 aa10.68□□□□□ -0.7
CEACAM1-208ENST00000403461 SHANK2Q9UPX8 1470 aa10.68□□□□□ -0.7
CEACAM1-208ENST00000403461 NLRP1Q9C000 1473 aa10.67□□□□□ -0.7
CEACAM1-208ENST00000403461 MIA2Q96PC5 1412 aa10.67□□□□□ -0.7
CEACAM1-208ENST00000403461 ADGBQ8N7X0 1667 aa10.66□□□□□ -0.7
CEACAM1-208ENST00000403461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.66□□□□□ -0.7
CEACAM1-208ENST00000403461 TIAM1Q13009 1591 aa10.66□□□□□ -0.7
CEACAM1-208ENST00000403461 GUCA2AQ02747 115 aa10.66□□□□□ -0.7
CEACAM1-208ENST00000403461 PCDHGC3Q9UN70 934 aa10.66□□□□□ -0.7
CEACAM1-208ENST00000403461 SLC27A5Q9Y2P5 690 aa10.66□□□□□ -0.7
CEACAM1-208ENST00000403461 PCDHB15Q9Y5E8 787 aa10.66□□□□□ -0.7
CEACAM1-208ENST00000403461 NPHP4O75161 1426 aaPredicted RBP10.66□□□□□ -0.7
CEACAM1-208ENST00000403461 DNMT1P26358 1616 aaKnown RBP10.66□□□□□ -0.7
CEACAM1-208ENST00000403461 NR1I2O75469 434 aa10.65□□□□□ -0.7
CEACAM1-208ENST00000403461 GFRA3O60609 400 aa10.64□□□□□ -0.71
CEACAM1-208ENST00000403461 LAPTM4AQ15012 233 aa10.64□□□□□ -0.71
CEACAM1-208ENST00000403461 PRPF38BQ5VTL8 546 aaKnown RBP10.64□□□□□ -0.71
CEACAM1-208ENST00000403461 BLOC1S3Q6QNY0 202 aa10.64□□□□□ -0.71
CEACAM1-208ENST00000403461 SCUBE3Q8IX30 993 aa10.64□□□□□ -0.71
CEACAM1-208ENST00000403461 PRKD2Q9BZL6 878 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms