RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CEP350Q5VT06 3117 aa17.47■□□□□ 0.39
SPTLC1P3-201ENST00000403408 WNK3Q9BYP7 1800 aa17.47■□□□□ 0.39
SPTLC1P3-201ENST00000403408 SLIT3O75094 1523 aa17.47■□□□□ 0.39
SPTLC1P3-201ENST00000403408 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
SPTLC1P3-201ENST00000403408 BCL11BQ9C0K0 894 aaPredicted RBP17.46■□□□□ 0.39
SPTLC1P3-201ENST00000403408 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
SPTLC1P3-201ENST00000403408 ZNF784Q8NCA9 323 aaPredicted RBP17.45■□□□□ 0.38
SPTLC1P3-201ENST00000403408 ATF5Q9Y2D1 282 aaPredicted RBP17.45■□□□□ 0.38
SPTLC1P3-201ENST00000403408 DDB1Q16531 1140 aa17.44■□□□□ 0.38
SPTLC1P3-201ENST00000403408 PIK3C2AO00443 1686 aa17.44■□□□□ 0.38
SPTLC1P3-201ENST00000403408 RGPD5Q99666 1765 aa17.43■□□□□ 0.38
SPTLC1P3-201ENST00000403408 SGIP1Q9BQI5 828 aa17.43■□□□□ 0.38
SPTLC1P3-201ENST00000403408 USP6P35125 1406 aa17.43■□□□□ 0.38
SPTLC1P3-201ENST00000403408 KIAA1210Q9ULL0 1709 aa17.43■□□□□ 0.38
SPTLC1P3-201ENST00000403408 BCL9O00512 1426 aa17.42■□□□□ 0.38
SPTLC1P3-201ENST00000403408 CABP1Q9NZU7 370 aa17.42■□□□□ 0.38
SPTLC1P3-201ENST00000403408 C11orf95C9JLR9 678 aaPredicted RBP17.41■□□□□ 0.38
SPTLC1P3-201ENST00000403408 NLRP6P59044 892 aa17.41■□□□□ 0.38
SPTLC1P3-201ENST00000403408 SRPK2P78362 688 aaKnown RBP17.41■□□□□ 0.38
SPTLC1P3-201ENST00000403408 TOM1L2Q6ZVM7 507 aa17.41■□□□□ 0.38
SPTLC1P3-201ENST00000403408 TXNRD1Q16881 649 aa17.4■□□□□ 0.38
SPTLC1P3-201ENST00000403408 WDR17Q8IZU2 1322 aa17.4■□□□□ 0.38
SPTLC1P3-201ENST00000403408 AKAP12Q02952 1782 aa17.4■□□□□ 0.38
SPTLC1P3-201ENST00000403408 SYT17Q9BSW7 474 aa17.39■□□□□ 0.37
SPTLC1P3-201ENST00000403408 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
SPTLC1P3-201ENST00000403408 SLC15A2Q16348 729 aa17.38■□□□□ 0.37
SPTLC1P3-201ENST00000403408 ARHGEF25Q86VW2 580 aa17.38■□□□□ 0.37
SPTLC1P3-201ENST00000403408 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
SPTLC1P3-201ENST00000403408 BRD4O60885 1362 aaPredicted RBP17.38■□□□□ 0.37
SPTLC1P3-201ENST00000403408 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
SPTLC1P3-201ENST00000403408 QRICH2Q9H0J4 1663 aa17.37■□□□□ 0.37
SPTLC1P3-201ENST00000403408 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
SPTLC1P3-201ENST00000403408 CHD4Q14839 1912 aa17.37■□□□□ 0.37
SPTLC1P3-201ENST00000403408 CARD10Q9BWT7 1032 aa17.35■□□□□ 0.37
SPTLC1P3-201ENST00000403408 STK32BQ9NY57 414 aa17.35■□□□□ 0.37
SPTLC1P3-201ENST00000403408 PAPPAQ13219 1627 aa17.35■□□□□ 0.37
SPTLC1P3-201ENST00000403408 NFAT5O94916 1531 aa17.34■□□□□ 0.37
SPTLC1P3-201ENST00000403408 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.36
SPTLC1P3-201ENST00000403408 SOX12O15370 315 aa17.32■□□□□ 0.36
SPTLC1P3-201ENST00000403408 MTFR1LQ9H019 292 aa17.32■□□□□ 0.36
SPTLC1P3-201ENST00000403408 ZNF827Q17R98 1081 aa17.31■□□□□ 0.36
SPTLC1P3-201ENST00000403408 ACSBG1Q96GR2 724 aa17.31■□□□□ 0.36
SPTLC1P3-201ENST00000403408 CDCA7Q9BWT1 371 aaPredicted RBP17.31■□□□□ 0.36
SPTLC1P3-201ENST00000403408 NHSQ6T4R5 1651 aa17.31■□□□□ 0.36
SPTLC1P3-201ENST00000403408 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
SPTLC1P3-201ENST00000403408 TNS2Q63HR2 1409 aa17.3■□□□□ 0.36
SPTLC1P3-201ENST00000403408 EXOC5O00471 708 aa17.3■□□□□ 0.36
SPTLC1P3-201ENST00000403408 LRRC4BQ9NT99 713 aa17.3■□□□□ 0.36
SPTLC1P3-201ENST00000403408 KAT6BQ8WYB5 2073 aa17.29■□□□□ 0.36
SPTLC1P3-201ENST00000403408 C1QTNF8P60827 252 aa17.29■□□□□ 0.36
SPTLC1P3-201ENST00000403408 SENP3-EIF4A1A0A087X0R7 540 aa17.28■□□□□ 0.36
SPTLC1P3-201ENST00000403408 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
SPTLC1P3-201ENST00000403408 ARXQ96QS3 562 aa17.28■□□□□ 0.36
SPTLC1P3-201ENST00000403408 BTAF1O14981 1849 aa17.28■□□□□ 0.36
SPTLC1P3-201ENST00000403408 MAP3K5Q99683 1374 aa17.27■□□□□ 0.35
SPTLC1P3-201ENST00000403408 ABCC6O95255 1503 aa17.26■□□□□ 0.35
SPTLC1P3-201ENST00000403408 KCNH5Q8NCM2 988 aa17.25■□□□□ 0.35
SPTLC1P3-201ENST00000403408 CCDC7Q96M83 1385 aa17.25■□□□□ 0.35
SPTLC1P3-201ENST00000403408 COL24A1Q17RW2 1714 aa17.24■□□□□ 0.35
SPTLC1P3-201ENST00000403408 AKT1S1Q96B36 256 aa17.23■□□□□ 0.35
SPTLC1P3-201ENST00000403408 TUBGCP6Q96RT7 1819 aa17.23■□□□□ 0.35
SPTLC1P3-201ENST00000403408 EVC2Q86UK5 1308 aa17.22■□□□□ 0.35
SPTLC1P3-201ENST00000403408 ZNF692Q9BU19 519 aaPredicted RBP17.22■□□□□ 0.35
SPTLC1P3-201ENST00000403408 ERBB3P21860 1342 aa17.21■□□□□ 0.35
SPTLC1P3-201ENST00000403408 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.35
SPTLC1P3-201ENST00000403408 L3MBTL2Q969R5 705 aa17.21■□□□□ 0.35
SPTLC1P3-201ENST00000403408 MON2Q7Z3U7 1717 aa17.21■□□□□ 0.35
SPTLC1P3-201ENST00000403408 CD163L1Q9NR16 1453 aa17.2■□□□□ 0.34
SPTLC1P3-201ENST00000403408 KCNQ4P56696 695 aa17.2■□□□□ 0.34
SPTLC1P3-201ENST00000403408 SHANK3Q9BYB0 1731 aa17.2■□□□□ 0.34
SPTLC1P3-201ENST00000403408 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
SPTLC1P3-201ENST00000403408 USP31Q70CQ4 1352 aa17.19■□□□□ 0.34
SPTLC1P3-201ENST00000403408 KTN1Q86UP2 1357 aaKnown RBP17.19■□□□□ 0.34
SPTLC1P3-201ENST00000403408 NME9Q86XW9 330 aa17.19■□□□□ 0.34
SPTLC1P3-201ENST00000403408 NLGN2Q8NFZ4 835 aa17.19■□□□□ 0.34
SPTLC1P3-201ENST00000403408 NLRP2Q9NX02 1062 aa17.19■□□□□ 0.34
SPTLC1P3-201ENST00000403408 LTN1O94822 1766 aa17.19■□□□□ 0.34
SPTLC1P3-201ENST00000403408 PNPLA7Q6ZV29 1317 aa17.19■□□□□ 0.34
SPTLC1P3-201ENST00000403408 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
SPTLC1P3-201ENST00000403408 IL2RBP14784 551 aa17.18■□□□□ 0.34
SPTLC1P3-201ENST00000403408 GPR162Q16538 588 aa17.18■□□□□ 0.34
SPTLC1P3-201ENST00000403408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.34
SPTLC1P3-201ENST00000403408 SBNO2Q9Y2G9 1366 aa17.17■□□□□ 0.34
SPTLC1P3-201ENST00000403408 ANKRD24Q8TF21 1146 aa17.16■□□□□ 0.34
SPTLC1P3-201ENST00000403408 YBX3P16989 372 aaKnown RBP eCLIP17.14■□□□□ 0.33
SPTLC1P3-201ENST00000403408 KLHL34Q8N239 644 aa17.14■□□□□ 0.33
SPTLC1P3-201ENST00000403408 NSD2O96028 1365 aa17.14■□□□□ 0.33
SPTLC1P3-201ENST00000403408 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
SPTLC1P3-201ENST00000403408 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
SPTLC1P3-201ENST00000403408 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
SPTLC1P3-201ENST00000403408 SLC16A10Q8TF71 515 aa17.12■□□□□ 0.33
SPTLC1P3-201ENST00000403408 LY75O60449 1722 aa17.11■□□□□ 0.33
SPTLC1P3-201ENST00000403408 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
SPTLC1P3-201ENST00000403408 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
SPTLC1P3-201ENST00000403408 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
SPTLC1P3-201ENST00000403408 SLC27A3Q5K4L6 730 aa17.1■□□□□ 0.33
SPTLC1P3-201ENST00000403408 SLC12A5Q9H2X9 1139 aa17.1■□□□□ 0.33
SPTLC1P3-201ENST00000403408 ROCK2O75116 1388 aaKnown RBP17.1■□□□□ 0.33
SPTLC1P3-201ENST00000403408 FAM208AQ9UK61 1670 aaKnown RBP17.09■□□□□ 0.33
SPTLC1P3-201ENST00000403408 DOT1LQ8TEK3 1739 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms