RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 DMRT2Q9Y5R5 561 aa20.48■□□□□ 0.87
PDGFA-203ENST00000402802 L1TD1Q5T7N2 865 aaKnown RBP20.47■□□□□ 0.87
PDGFA-203ENST00000402802 OVOS2A0A0J9YW53 1432 aa20.47■□□□□ 0.87
PDGFA-203ENST00000402802 OVOS2Q6IE36 1432 aa20.47■□□□□ 0.87
PDGFA-203ENST00000402802 PNPLA6Q8IY17 1366 aa20.47■□□□□ 0.87
PDGFA-203ENST00000402802 XPCQ01831 940 aaPredicted RBP20.47■□□□□ 0.87
PDGFA-203ENST00000402802 RUNDC1Q96C34 613 aa20.46■□□□□ 0.87
PDGFA-203ENST00000402802 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
PDGFA-203ENST00000402802 TCP11L2Q8N4U5 519 aa20.45■□□□□ 0.87
PDGFA-203ENST00000402802 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.87
PDGFA-203ENST00000402802 ZNF521Q96K83 1311 aa20.45■□□□□ 0.86
PDGFA-203ENST00000402802 NLRP6P59044 892 aa20.43■□□□□ 0.86
PDGFA-203ENST00000402802 STRCQ7RTU9 1775 aa20.43■□□□□ 0.86
PDGFA-203ENST00000402802 AATKQ6ZMQ8 1374 aa20.43■□□□□ 0.86
PDGFA-203ENST00000402802 FOXO3O43524 673 aa20.43■□□□□ 0.86
PDGFA-203ENST00000402802 TTC21AQ8NDW8 1320 aa20.43■□□□□ 0.86
PDGFA-203ENST00000402802 HMOX1P09601 288 aa20.42■□□□□ 0.86
PDGFA-203ENST00000402802 PIK3C2AO00443 1686 aa20.42■□□□□ 0.86
PDGFA-203ENST00000402802 ABTB2Q8N961 1025 aa20.41■□□□□ 0.86
PDGFA-203ENST00000402802 IQSEC2Q5JU85 1478 aa20.41■□□□□ 0.86
PDGFA-203ENST00000402802 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
PDGFA-203ENST00000402802 ZMYND15Q9H091 742 aa20.41■□□□□ 0.86
PDGFA-203ENST00000402802 C19orf44Q9H6X5 657 aa20.41■□□□□ 0.86
PDGFA-203ENST00000402802 PSME1Q06323 249 aa20.4■□□□□ 0.86
PDGFA-203ENST00000402802 PLEKHF1Q96S99 279 aa20.4■□□□□ 0.86
PDGFA-203ENST00000402802 ZNF335Q9H4Z2 1342 aaPredicted RBP20.4■□□□□ 0.86
PDGFA-203ENST00000402802 IL13P35225 146 aa20.39■□□□□ 0.86
PDGFA-203ENST00000402802 RRP9O43818 475 aaKnown RBP20.39■□□□□ 0.85
PDGFA-203ENST00000402802 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
PDGFA-203ENST00000402802 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
PDGFA-203ENST00000402802 DUSP27Q5VZP5 1158 aa20.38■□□□□ 0.85
PDGFA-203ENST00000402802 VSIG10Q8N0Z9 540 aa20.38■□□□□ 0.85
PDGFA-203ENST00000402802 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
PDGFA-203ENST00000402802 CDK12Q9NYV4 1490 aaPredicted RBP20.38■□□□□ 0.85
PDGFA-203ENST00000402802 USP31Q70CQ4 1352 aa20.38■□□□□ 0.85
PDGFA-203ENST00000402802 MAP3K19Q56UN5 1328 aa20.37■□□□□ 0.85
PDGFA-203ENST00000402802 C1orf167Q5SNV9 1468 aa20.36■□□□□ 0.85
PDGFA-203ENST00000402802 PEAK1Q9H792 1746 aa20.36■□□□□ 0.85
PDGFA-203ENST00000402802 SLFN5Q08AF3 891 aa20.36■□□□□ 0.85
PDGFA-203ENST00000402802 ATF3P18847 181 aa20.36■□□□□ 0.85
PDGFA-203ENST00000402802 PRKAR2BP31323 418 aa20.36■□□□□ 0.85
PDGFA-203ENST00000402802 HSP90AA2PQ14568 343 aaPredicted RBP20.35■□□□□ 0.85
PDGFA-203ENST00000402802 C20orf194Q5TEA3 1177 aa20.35■□□□□ 0.85
PDGFA-203ENST00000402802 EIF4A2Q14240 407 aaKnown RBP20.35■□□□□ 0.85
PDGFA-203ENST00000402802 LRRC7Q96NW7 1537 aa20.34■□□□□ 0.85
PDGFA-203ENST00000402802 MAPK8IP3Q9UPT6 1336 aa20.34■□□□□ 0.85
PDGFA-203ENST00000402802 CLCN1P35523 988 aa20.34■□□□□ 0.85
PDGFA-203ENST00000402802 LMOD2Q6P5Q4 547 aa20.34■□□□□ 0.85
PDGFA-203ENST00000402802 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
PDGFA-203ENST00000402802 PHACTR3Q96KR7 559 aa20.33■□□□□ 0.85
PDGFA-203ENST00000402802 PNNQ9H307 717 aaKnown RBP20.33■□□□□ 0.85
PDGFA-203ENST00000402802 HSP90AA1P07900 732 aaKnown RBP20.32■□□□□ 0.84
PDGFA-203ENST00000402802 TMPOP42166 694 aaKnown RBP20.32■□□□□ 0.84
PDGFA-203ENST00000402802 AEBP1Q8IUX7 1158 aa20.32■□□□□ 0.84
PDGFA-203ENST00000402802 MARF1Q9Y4F3 1742 aaKnown RBP20.32■□□□□ 0.84
PDGFA-203ENST00000402802 MST1RQ04912 1400 aa20.32■□□□□ 0.84
PDGFA-203ENST00000402802 NAP1L5Q96NT1 182 aaPredicted RBP20.32■□□□□ 0.84
PDGFA-203ENST00000402802 FCHSD2O94868 740 aa20.31■□□□□ 0.84
PDGFA-203ENST00000402802 AMPHP49418 695 aa20.31■□□□□ 0.84
PDGFA-203ENST00000402802 ZBTB7CA1YPR0 619 aa20.3■□□□□ 0.84
PDGFA-203ENST00000402802 PHF23Q9BUL5 403 aaPredicted RBP20.3■□□□□ 0.84
PDGFA-203ENST00000402802 BECN1Q14457 450 aa20.3■□□□□ 0.84
PDGFA-203ENST00000402802 KRT28Q7Z3Y7 464 aa20.3■□□□□ 0.84
PDGFA-203ENST00000402802 TRMT2AQ8IZ69 625 aaKnown RBP20.3■□□□□ 0.84
PDGFA-203ENST00000402802 RIPK4P57078 832 aa20.29■□□□□ 0.84
PDGFA-203ENST00000402802 TRIM35Q9UPQ4 493 aa20.29■□□□□ 0.84
PDGFA-203ENST00000402802 E9PSI1 815 aa20.28■□□□□ 0.84
PDGFA-203ENST00000402802 SULT6B1Q6IMI4 303 aa20.28■□□□□ 0.84
PDGFA-203ENST00000402802 XIRP1Q702N8 1843 aaKnown RBP20.28■□□□□ 0.84
PDGFA-203ENST00000402802 MSH6P52701 1360 aa20.27■□□□□ 0.84
PDGFA-203ENST00000402802 USP19O94966 1318 aa20.27■□□□□ 0.84
PDGFA-203ENST00000402802 LTV1Q96GA3 475 aaPredicted RBP20.27■□□□□ 0.84
PDGFA-203ENST00000402802 SBNO1A3KN83 1393 aa20.26■□□□□ 0.83
PDGFA-203ENST00000402802 CADPS2Q86UW7 1296 aa20.26■□□□□ 0.83
PDGFA-203ENST00000402802 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
PDGFA-203ENST00000402802 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
PDGFA-203ENST00000402802 RGS3P49796 1198 aa20.26■□□□□ 0.83
PDGFA-203ENST00000402802 FLT4P35916 1363 aa20.25■□□□□ 0.83
PDGFA-203ENST00000402802 FSD2A1L4K1 749 aa20.25■□□□□ 0.83
PDGFA-203ENST00000402802 CCDC27Q2M243 656 aa20.25■□□□□ 0.83
PDGFA-203ENST00000402802 XRCC6P12956 609 aaKnown RBP eCLIP20.25■□□□□ 0.83
PDGFA-203ENST00000402802 HOXC9P31274 260 aa20.25■□□□□ 0.83
PDGFA-203ENST00000402802 GOLGA6L3A6NEY3 463 aa20.24■□□□□ 0.83
PDGFA-203ENST00000402802 THUMPD2Q9BTF0 503 aaKnown RBP20.24■□□□□ 0.83
PDGFA-203ENST00000402802 TSR2Q969E8 191 aaKnown RBP20.24■□□□□ 0.83
PDGFA-203ENST00000402802 DCCP43146 1447 aa20.23■□□□□ 0.83
PDGFA-203ENST00000402802 NCOA3Q9Y6Q9 1424 aa20.23■□□□□ 0.83
PDGFA-203ENST00000402802 WDR63Q8IWG1 891 aa20.22■□□□□ 0.83
PDGFA-203ENST00000402802 ANTXR1Q9H6X2 564 aa20.22■□□□□ 0.83
PDGFA-203ENST00000402802 NFE2L2Q16236 605 aa20.21■□□□□ 0.83
PDGFA-203ENST00000402802 EYA1Q99502 592 aa20.21■□□□□ 0.83
PDGFA-203ENST00000402802 TRPM3Q9HCF6 1732 aaPredicted RBP20.21■□□□□ 0.83
PDGFA-203ENST00000402802 USP54Q70EL1 1684 aa20.2■□□□□ 0.82
PDGFA-203ENST00000402802 KIF1AQ12756 1690 aa20.2■□□□□ 0.82
PDGFA-203ENST00000402802 FAM83GA6ND36 823 aa20.2■□□□□ 0.82
PDGFA-203ENST00000402802 BCAR3O75815 825 aa20.2■□□□□ 0.82
PDGFA-203ENST00000402802 NFAT5O94916 1531 aa20.19■□□□□ 0.82
PDGFA-203ENST00000402802 GCP02774 474 aa20.19■□□□□ 0.82
PDGFA-203ENST00000402802 DCTN1Q14203 1278 aa20.19■□□□□ 0.82
PDGFA-203ENST00000402802 BRINP3Q76B58 766 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms