RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
CBX1-203ENST00000402583 ARHGAP23Q9P227 1491 aa11.91□□□□□ -0.5
CBX1-203ENST00000402583 PLEKHG3A1L390 1219 aa11.91□□□□□ -0.5
CBX1-203ENST00000402583 IPO8O15397 1037 aaKnown RBP11.91□□□□□ -0.5
CBX1-203ENST00000402583 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
CBX1-203ENST00000402583 EXOSC9Q06265 439 aaKnown RBP11.91□□□□□ -0.5
CBX1-203ENST00000402583 NME9Q86XW9 330 aa11.91□□□□□ -0.5
CBX1-203ENST00000402583 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
CBX1-203ENST00000402583 RWDD1Q9H446 243 aaPredicted RBP11.91□□□□□ -0.5
CBX1-203ENST00000402583 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
CBX1-203ENST00000402583 TBX22Q9Y458 520 aa11.91□□□□□ -0.5
CBX1-203ENST00000402583 LRRC7Q96NW7 1537 aa11.91□□□□□ -0.5
CBX1-203ENST00000402583 KIF16BQ96L93 1317 aa11.9□□□□□ -0.5
CBX1-203ENST00000402583 IL13P35225 146 aa11.9□□□□□ -0.5
CBX1-203ENST00000402583 ITSN1Q15811 1721 aa11.9□□□□□ -0.5
CBX1-203ENST00000402583 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
CBX1-203ENST00000402583 NPM2Q86SE8 214 aaKnown RBP11.9□□□□□ -0.5
CBX1-203ENST00000402583 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
CBX1-203ENST00000402583 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
CBX1-203ENST00000402583 PTCH1Q13635 1447 aa11.89□□□□□ -0.51
CBX1-203ENST00000402583 LTKP29376 864 aa11.89□□□□□ -0.51
CBX1-203ENST00000402583 MVPQ14764 893 aaKnown RBP11.89□□□□□ -0.51
CBX1-203ENST00000402583 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
CBX1-203ENST00000402583 CHMP4BQ9H444 224 aaKnown RBP11.89□□□□□ -0.51
CBX1-203ENST00000402583 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
CBX1-203ENST00000402583 C3P01024 1663 aa11.88□□□□□ -0.51
CBX1-203ENST00000402583 GNAI1P63096 354 aa11.88□□□□□ -0.51
CBX1-203ENST00000402583 EMILIN1Q9Y6C2 1016 aa11.88□□□□□ -0.51
CBX1-203ENST00000402583 TTC21BQ7Z4L5 1316 aa11.87□□□□□ -0.51
CBX1-203ENST00000402583 TTC21AQ8NDW8 1320 aa11.87□□□□□ -0.51
CBX1-203ENST00000402583 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
CBX1-203ENST00000402583 IGHDP01880 384 aa11.87□□□□□ -0.51
CBX1-203ENST00000402583 RGS3P49796 1198 aa11.87□□□□□ -0.51
CBX1-203ENST00000402583 BCL2L13Q9BXK5 485 aa11.87□□□□□ -0.51
CBX1-203ENST00000402583 DDX19BQ9UMR2 479 aa11.87□□□□□ -0.51
CBX1-203ENST00000402583 TOPAZ1Q8N9V7 1692 aa11.87□□□□□ -0.51
CBX1-203ENST00000402583 ACEP12821 1306 aa11.86□□□□□ -0.51
CBX1-203ENST00000402583 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
CBX1-203ENST00000402583 CEBPAP49715 358 aaPredicted RBP11.86□□□□□ -0.51
CBX1-203ENST00000402583 ATF7IPQ6VMQ6 1270 aa11.86□□□□□ -0.51
CBX1-203ENST00000402583 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
CBX1-203ENST00000402583 AMOTL2Q9Y2J4 779 aa11.86□□□□□ -0.51
CBX1-203ENST00000402583 USP6P35125 1406 aa11.86□□□□□ -0.51
CBX1-203ENST00000402583 FER1L4A9Z1Z3 1794 aa11.85□□□□□ -0.51
CBX1-203ENST00000402583 PIK3R4Q99570 1358 aa11.85□□□□□ -0.51
CBX1-203ENST00000402583 PITPNM1O00562 1244 aa11.85□□□□□ -0.51
CBX1-203ENST00000402583 HMOX1P09601 288 aa11.85□□□□□ -0.51
CBX1-203ENST00000402583 PRR29P0C7W0 189 aa11.85□□□□□ -0.51
CBX1-203ENST00000402583 HAP1P54257 671 aaPredicted RBP11.85□□□□□ -0.51
CBX1-203ENST00000402583 BRPF1P55201 1214 aaPredicted RBP11.85□□□□□ -0.51
CBX1-203ENST00000402583 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
CBX1-203ENST00000402583 SSH1Q8WYL5 1049 aa11.85□□□□□ -0.51
CBX1-203ENST00000402583 SLC26A8Q96RN1 970 aa11.85□□□□□ -0.51
CBX1-203ENST00000402583 PTPRUQ92729 1446 aa11.85□□□□□ -0.51
CBX1-203ENST00000402583 NRKQ7Z2Y5 1582 aa11.84□□□□□ -0.51
CBX1-203ENST00000402583 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.84□□□□□ -0.51
CBX1-203ENST00000402583 RLBP1P12271 317 aa11.84□□□□□ -0.51
CBX1-203ENST00000402583 C8orf34Q49A92 452 aa11.84□□□□□ -0.51
CBX1-203ENST00000402583 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
CBX1-203ENST00000402583 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
CBX1-203ENST00000402583 OVOS2A0A0J9YW53 1432 aa11.84□□□□□ -0.51
CBX1-203ENST00000402583 OVOS2Q6IE36 1432 aa11.84□□□□□ -0.51
CBX1-203ENST00000402583 NCKAP5LQ9HCH0 1330 aa11.84□□□□□ -0.51
CBX1-203ENST00000402583 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
CBX1-203ENST00000402583 NOB1Q9ULX3 412 aaKnown RBP11.83□□□□□ -0.52
CBX1-203ENST00000402583 ANKARQ7Z5J8 1434 aa11.83□□□□□ -0.52
CBX1-203ENST00000402583 USP31Q70CQ4 1352 aa11.82□□□□□ -0.52
CBX1-203ENST00000402583 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
CBX1-203ENST00000402583 TRIM27P14373 513 aa11.82□□□□□ -0.52
CBX1-203ENST00000402583 FBLN1P23142 703 aa11.82□□□□□ -0.52
CBX1-203ENST00000402583 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
CBX1-203ENST00000402583 SKAP1Q86WV1 359 aa11.82□□□□□ -0.52
CBX1-203ENST00000402583 ITPRIPQ8IWB1 547 aa11.82□□□□□ -0.52
CBX1-203ENST00000402583 ARHGAP45Q92619 1136 aa11.82□□□□□ -0.52
CBX1-203ENST00000402583 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
CBX1-203ENST00000402583 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
CBX1-203ENST00000402583 ZNF853P0CG23 659 aa11.81□□□□□ -0.52
CBX1-203ENST00000402583 HDAC1Q13547 482 aaPredicted RBP11.81□□□□□ -0.52
CBX1-203ENST00000402583 NGDNQ8NEJ9 315 aaKnown RBP11.81□□□□□ -0.52
CBX1-203ENST00000402583 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
CBX1-203ENST00000402583 TNNQ9UQP3 1299 aa11.81□□□□□ -0.52
CBX1-203ENST00000402583 SSH2Q76I76 1423 aa11.8□□□□□ -0.52
CBX1-203ENST00000402583 EIF4A2Q14240 407 aaKnown RBP11.8□□□□□ -0.52
CBX1-203ENST00000402583 MAP2P11137 1827 aaKnown RBP11.8□□□□□ -0.52
CBX1-203ENST00000402583 VAMP4O75379 141 aa11.79□□□□□ -0.52
CBX1-203ENST00000402583 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
CBX1-203ENST00000402583 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
CBX1-203ENST00000402583 UPF2Q9HAU5 1272 aaKnown RBP11.79□□□□□ -0.52
CBX1-203ENST00000402583 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
CBX1-203ENST00000402583 XRN1Q8IZH2 1706 aaKnown RBP11.79□□□□□ -0.52
CBX1-203ENST00000402583 CEP170BQ9Y4F5 1589 aaPredicted RBP11.79□□□□□ -0.52
CBX1-203ENST00000402583 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
CBX1-203ENST00000402583 ARHGEF10O15013 1369 aa11.79□□□□□ -0.52
CBX1-203ENST00000402583 RIMS1Q86UR5 1692 aaKnown RBP11.78□□□□□ -0.52
CBX1-203ENST00000402583 NALCNQ8IZF0 1738 aa11.78□□□□□ -0.52
CBX1-203ENST00000402583 SULT6B1Q6IMI4 303 aa11.78□□□□□ -0.52
CBX1-203ENST00000402583 TMEM57Q8N5G2 664 aa11.78□□□□□ -0.52
CBX1-203ENST00000402583 MRPL50Q8N5N7 158 aaKnown RBP11.78□□□□□ -0.52
CBX1-203ENST00000402583 API5Q9BZZ5 524 aaKnown RBP11.78□□□□□ -0.52
CBX1-203ENST00000402583 MBIPQ9NS73 344 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms