RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 KRT28Q7Z3Y7 464 aa17.38■□□□□ 0.37
SCAF4-202ENST00000399804 SYTL4Q96C24 671 aaPredicted RBP17.38■□□□□ 0.37
SCAF4-202ENST00000399804 METP08581 1390 aa17.37■□□□□ 0.37
SCAF4-202ENST00000399804 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
SCAF4-202ENST00000399804 GPATCH3Q96I76 525 aa17.36■□□□□ 0.37
SCAF4-202ENST00000399804 IL16Q14005 1332 aa17.36■□□□□ 0.37
SCAF4-202ENST00000399804 GNAI3P08754 354 aa17.36■□□□□ 0.37
SCAF4-202ENST00000399804 BCORL1Q5H9F3 1711 aa17.36■□□□□ 0.37
SCAF4-202ENST00000399804 ARHGAP31Q2M1Z3 1444 aa17.36■□□□□ 0.37
SCAF4-202ENST00000399804 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
SCAF4-202ENST00000399804 TOM1L2Q6ZVM7 507 aa17.35■□□□□ 0.37
SCAF4-202ENST00000399804 FOXD4L1Q9NU39 408 aa17.35■□□□□ 0.37
SCAF4-202ENST00000399804 KIF1BO60333 1816 aa17.35■□□□□ 0.37
SCAF4-202ENST00000399804 TAF7LQ5H9L4 462 aa17.35■□□□□ 0.37
SCAF4-202ENST00000399804 GCC1Q96CN9 775 aa17.33■□□□□ 0.36
SCAF4-202ENST00000399804 BTBD11A6QL63 1104 aa17.33■□□□□ 0.36
SCAF4-202ENST00000399804 TAF7Q15545 349 aaPredicted RBP17.33■□□□□ 0.36
SCAF4-202ENST00000399804 GORABQ5T7V8 394 aa17.33■□□□□ 0.36
SCAF4-202ENST00000399804 RNF17Q9BXT8 1623 aaKnown RBP17.33■□□□□ 0.36
SCAF4-202ENST00000399804 HSPA2P54652 639 aa17.32■□□□□ 0.36
SCAF4-202ENST00000399804 TNNQ9UQP3 1299 aa17.32■□□□□ 0.36
SCAF4-202ENST00000399804 MAP3K19Q56UN5 1328 aa17.32■□□□□ 0.36
SCAF4-202ENST00000399804 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
SCAF4-202ENST00000399804 GNAI2P04899 355 aa17.32■□□□□ 0.36
SCAF4-202ENST00000399804 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
SCAF4-202ENST00000399804 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
SCAF4-202ENST00000399804 MPRIPQ6WCQ1 1025 aa17.32■□□□□ 0.36
SCAF4-202ENST00000399804 IGHDP01880 384 aa17.31■□□□□ 0.36
SCAF4-202ENST00000399804 DDX54Q8TDD1 881 aaKnown RBP17.31■□□□□ 0.36
SCAF4-202ENST00000399804 C22orf23Q9BZE7 217 aa17.31■□□□□ 0.36
SCAF4-202ENST00000399804 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
SCAF4-202ENST00000399804 E9PCH4 1651 aa17.31■□□□□ 0.36
SCAF4-202ENST00000399804 EDC4Q6P2E9 1401 aaKnown RBP17.31■□□□□ 0.36
SCAF4-202ENST00000399804 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
SCAF4-202ENST00000399804 SPG7Q9UQ90 795 aa17.31■□□□□ 0.36
SCAF4-202ENST00000399804 BLMP54132 1417 aaPredicted RBP17.3■□□□□ 0.36
SCAF4-202ENST00000399804 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
SCAF4-202ENST00000399804 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
SCAF4-202ENST00000399804 KDM5AP29375 1690 aaKnown RBP17.3■□□□□ 0.36
SCAF4-202ENST00000399804 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
SCAF4-202ENST00000399804 CADPS2Q86UW7 1296 aa17.3■□□□□ 0.36
SCAF4-202ENST00000399804 IL13P35225 146 aa17.29■□□□□ 0.36
SCAF4-202ENST00000399804 F6X3S4 739 aa17.29■□□□□ 0.36
SCAF4-202ENST00000399804 C8orf58Q8NAV2 365 aa17.29■□□□□ 0.36
SCAF4-202ENST00000399804 SPHKAPQ2M3C7 1700 aa17.29■□□□□ 0.36
SCAF4-202ENST00000399804 RLBP1P12271 317 aa17.29■□□□□ 0.36
SCAF4-202ENST00000399804 CHD1LQ86WJ1 897 aa17.29■□□□□ 0.36
SCAF4-202ENST00000399804 PLEKHG3A1L390 1219 aa17.28■□□□□ 0.36
SCAF4-202ENST00000399804 SRCIN1Q9C0H9 1055 aa17.28■□□□□ 0.36
SCAF4-202ENST00000399804 EYA1Q99502 592 aa17.28■□□□□ 0.36
SCAF4-202ENST00000399804 PCDHB15Q9Y5E8 787 aa17.28■□□□□ 0.36
SCAF4-202ENST00000399804 MAP3K4Q9Y6R4 1608 aa17.28■□□□□ 0.36
SCAF4-202ENST00000399804 CABP4P57796 275 aa17.28■□□□□ 0.36
SCAF4-202ENST00000399804 G3BP1Q13283 466 aaKnown RBP eCLIP17.28■□□□□ 0.362e-6■□□□□ 9.7
SCAF4-202ENST00000399804 TSPYL6Q8N831 410 aa17.28■□□□□ 0.36
SCAF4-202ENST00000399804 TAOK2Q9UL54 1235 aa17.28■□□□□ 0.36
SCAF4-202ENST00000399804 INSRP06213 1382 aa17.28■□□□□ 0.36
SCAF4-202ENST00000399804 IFIT2P09913 472 aaKnown RBP17.27■□□□□ 0.36
SCAF4-202ENST00000399804 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
SCAF4-202ENST00000399804 INO80Q9ULG1 1556 aaPredicted RBP17.27■□□□□ 0.36
SCAF4-202ENST00000399804 AMOTQ4VCS5 1084 aa17.27■□□□□ 0.36
SCAF4-202ENST00000399804 C19orf44Q9H6X5 657 aa17.27■□□□□ 0.36
SCAF4-202ENST00000399804 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.36
SCAF4-202ENST00000399804 MTHFSDQ2M296 383 aaKnown RBP17.27■□□□□ 0.35
SCAF4-202ENST00000399804 FLT4P35916 1363 aa17.27■□□□□ 0.35
SCAF4-202ENST00000399804 REC8O95072 547 aa17.26■□□□□ 0.35
SCAF4-202ENST00000399804 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
SCAF4-202ENST00000399804 ST18O60284 1047 aa17.26■□□□□ 0.35
SCAF4-202ENST00000399804 ANKRD24Q8TF21 1146 aa17.26■□□□□ 0.35
SCAF4-202ENST00000399804 MYL6BP14649 208 aa17.25■□□□□ 0.35
SCAF4-202ENST00000399804 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
SCAF4-202ENST00000399804 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
SCAF4-202ENST00000399804 RPAP2Q8IXW5 612 aaPredicted RBP17.25■□□□□ 0.35
SCAF4-202ENST00000399804 KRT24Q2M2I5 525 aa17.25■□□□□ 0.35
SCAF4-202ENST00000399804 ZMYM4Q5VZL5 1548 aa17.25■□□□□ 0.35
SCAF4-202ENST00000399804 CDC45O75419 566 aa17.24■□□□□ 0.35
SCAF4-202ENST00000399804 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
SCAF4-202ENST00000399804 SYNMO15061 1565 aa17.24■□□□□ 0.35
SCAF4-202ENST00000399804 VAMP4O75379 141 aa17.24■□□□□ 0.35
SCAF4-202ENST00000399804 GZF1Q9H116 711 aaPredicted RBP17.24■□□□□ 0.35
SCAF4-202ENST00000399804 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
SCAF4-202ENST00000399804 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
SCAF4-202ENST00000399804 GCP02774 474 aa17.23■□□□□ 0.35
SCAF4-202ENST00000399804 LRRC59Q96AG4 307 aaKnown RBP17.23■□□□□ 0.35
SCAF4-202ENST00000399804 DIAPH3Q9NSV4 1193 aa17.23■□□□□ 0.35
SCAF4-202ENST00000399804 GBP4Q96PP9 640 aa17.23■□□□□ 0.35
SCAF4-202ENST00000399804 LMTK2Q8IWU2 1503 aa17.23■□□□□ 0.35
SCAF4-202ENST00000399804 KIDINS220Q9ULH0 1771 aa17.22■□□□□ 0.35
SCAF4-202ENST00000399804 A2ML1A8K2U0 1454 aa17.22■□□□□ 0.35
SCAF4-202ENST00000399804 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
SCAF4-202ENST00000399804 MADDQ8WXG6 1647 aa17.22■□□□□ 0.35
SCAF4-202ENST00000399804 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
SCAF4-202ENST00000399804 HOXC9P31274 260 aa17.21■□□□□ 0.35
SCAF4-202ENST00000399804 CABLES1Q8TDN4 633 aa17.21■□□□□ 0.35
SCAF4-202ENST00000399804 CEP152O94986 1710 aa17.21■□□□□ 0.35
SCAF4-202ENST00000399804 PLEKHG1Q9ULL1 1385 aa17.21■□□□□ 0.35
SCAF4-202ENST00000399804 FLIIQ13045 1269 aa17.21■□□□□ 0.35
SCAF4-202ENST00000399804 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
SCAF4-202ENST00000399804 EXOC6BQ9Y2D4 811 aa17.21■□□□□ 0.35
SCAF4-202ENST00000399804 RBM42Q9BTD8 480 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms