RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
HLCS-202ENST00000399120 MIA2Q96PC5 1412 aa13.69□□□□□ -0.22
HLCS-202ENST00000399120 WDR33Q9C0J8 1336 aaKnown RBP13.69□□□□□ -0.22
HLCS-202ENST00000399120 UQCRHLA0A096LP55 91 aa13.69□□□□□ -0.22
HLCS-202ENST00000399120 UQCRHP07919 91 aa13.69□□□□□ -0.22
HLCS-202ENST00000399120 EIF5P55010 431 aaKnown RBP13.69□□□□□ -0.22
HLCS-202ENST00000399120 ZNF76P36508 570 aa13.69□□□□□ -0.22
HLCS-202ENST00000399120 SHTN1A0MZ66 631 aa13.68□□□□□ -0.22
HLCS-202ENST00000399120 CFAP45Q9UL16 551 aa13.68□□□□□ -0.22
HLCS-202ENST00000399120 ERICH4A6NGS2 130 aa13.68□□□□□ -0.22
HLCS-202ENST00000399120 RBM5P52756 815 aaKnown RBP eCLIP13.68□□□□□ -0.22
HLCS-202ENST00000399120 CEP57L1Q8IYX8 460 aa13.68□□□□□ -0.22
HLCS-202ENST00000399120 ZNF397Q8NF99 534 aaPredicted RBP13.68□□□□□ -0.22
HLCS-202ENST00000399120 PPP1R1BQ9UD71 204 aaPredicted RBP13.68□□□□□ -0.22
HLCS-202ENST00000399120 CDKL5O76039 1030 aa13.68□□□□□ -0.22
HLCS-202ENST00000399120 PPM1EQ8WY54 764 aa13.68□□□□□ -0.22
HLCS-202ENST00000399120 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
HLCS-202ENST00000399120 CRACR2AQ9BSW2 395 aa13.68□□□□□ -0.22
HLCS-202ENST00000399120 GNAI2P04899 355 aa13.67□□□□□ -0.22
HLCS-202ENST00000399120 ZSCAN25Q6NSZ9 544 aa13.67□□□□□ -0.22
HLCS-202ENST00000399120 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
HLCS-202ENST00000399120 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
HLCS-202ENST00000399120 GBP3Q9H0R5 595 aa13.67□□□□□ -0.22
HLCS-202ENST00000399120 IBSPP21815 317 aaPredicted RBP13.67□□□□□ -0.22
HLCS-202ENST00000399120 ARHGAP29Q52LW3 1261 aa13.67□□□□□ -0.22
HLCS-202ENST00000399120 NUTM2GQ5VZR2 741 aa13.67□□□□□ -0.22
HLCS-202ENST00000399120 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
HLCS-202ENST00000399120 MPNDQ8N594 471 aa13.66□□□□□ -0.22
HLCS-202ENST00000399120 GCC1Q96CN9 775 aa13.66□□□□□ -0.22
HLCS-202ENST00000399120 UPF3BQ9BZI7 483 aaKnown RBP13.66□□□□□ -0.22
HLCS-202ENST00000399120 TMCO3Q6UWJ1 677 aa13.66□□□□□ -0.22
HLCS-202ENST00000399120 PPP1R12BO60237 982 aaPredicted RBP13.65□□□□□ -0.22
HLCS-202ENST00000399120 SPATA32Q96LK8 384 aa13.65□□□□□ -0.22
HLCS-202ENST00000399120 PLEKHO1Q53GL0 409 aaPredicted RBP13.65□□□□□ -0.22
HLCS-202ENST00000399120 UBXN4Q92575 508 aa13.65□□□□□ -0.22
HLCS-202ENST00000399120 AEBP2Q6ZN18 517 aaPredicted RBP13.65□□□□□ -0.22
HLCS-202ENST00000399120 GGNBP2Q9H3C7 697 aa13.64□□□□□ -0.23
HLCS-202ENST00000399120 GRIPAP1Q4V328 841 aa13.64□□□□□ -0.23
HLCS-202ENST00000399120 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
HLCS-202ENST00000399120 ZSCAN29Q8IWY8 852 aaPredicted RBP13.64□□□□□ -0.23
HLCS-202ENST00000399120 UBAC1Q9BSL1 405 aa13.64□□□□□ -0.23
HLCS-202ENST00000399120 NUP62CLQ9H1M0 184 aa13.64□□□□□ -0.23
HLCS-202ENST00000399120 BRPF3Q9ULD4 1205 aa13.64□□□□□ -0.23
HLCS-202ENST00000399120 PDZRN3Q9UPQ7 1066 aa13.64□□□□□ -0.23
HLCS-202ENST00000399120 SPA17Q15506 151 aa13.64□□□□□ -0.23
HLCS-202ENST00000399120 DHX57Q6P158 1386 aaKnown RBP13.64□□□□□ -0.23
HLCS-202ENST00000399120 NLRP6P59044 892 aa13.63□□□□□ -0.23
HLCS-202ENST00000399120 MAP9Q49MG5 647 aa13.63□□□□□ -0.23
HLCS-202ENST00000399120 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
HLCS-202ENST00000399120 TICAM2Q86XR7 235 aa13.63□□□□□ -0.23
HLCS-202ENST00000399120 WASF1Q92558 559 aa13.63□□□□□ -0.23
HLCS-202ENST00000399120 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
HLCS-202ENST00000399120 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
HLCS-202ENST00000399120 CEP131Q9UPN4 1083 aa13.63□□□□□ -0.23
HLCS-202ENST00000399120 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
HLCS-202ENST00000399120 K7ELQ4 463 aaPredicted RBP13.62□□□□□ -0.23
HLCS-202ENST00000399120 MYZAPP0CAP1 466 aa13.62□□□□□ -0.23
HLCS-202ENST00000399120 TDO2P48775 406 aa13.62□□□□□ -0.23
HLCS-202ENST00000399120 C1orf115Q9H7X2 142 aa13.62□□□□□ -0.23
HLCS-202ENST00000399120 IFFO1Q0D2I5 559 aa13.62□□□□□ -0.23
HLCS-202ENST00000399120 SMC1AQ14683 1233 aaKnown RBP13.62□□□□□ -0.23
HLCS-202ENST00000399120 MPHOSPH8Q99549 860 aa13.62□□□□□ -0.23
HLCS-202ENST00000399120 SIL1Q9H173 461 aa13.62□□□□□ -0.23
HLCS-202ENST00000399120 SF3B2Q13435 895 aaKnown RBP13.62□□□□□ -0.23
HLCS-202ENST00000399120 BLOC1S2Q6QNY1 142 aa13.62□□□□□ -0.23
HLCS-202ENST00000399120 GOPCQ9HD26 462 aa13.62□□□□□ -0.23
HLCS-202ENST00000399120 SMG6Q86US8 1419 aaKnown RBP13.62□□□□□ -0.23
HLCS-202ENST00000399120 CFAP100Q494V2 611 aa13.61□□□□□ -0.23
HLCS-202ENST00000399120 PDCL2Q8N4E4 241 aa13.61□□□□□ -0.23
HLCS-202ENST00000399120 USP5P45974 858 aa13.61□□□□□ -0.23
HLCS-202ENST00000399120 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
HLCS-202ENST00000399120 HOOK3Q86VS8 718 aa13.61□□□□□ -0.23
HLCS-202ENST00000399120 MAP4K4O95819 1239 aaPredicted RBP13.61□□□□□ -0.23
HLCS-202ENST00000399120 TNIP1Q15025 636 aa13.61□□□□□ -0.23
HLCS-202ENST00000399120 MCM3P25205 808 aa13.61□□□□□ -0.23
HLCS-202ENST00000399120 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
HLCS-202ENST00000399120 TDRD9Q8NDG6 1382 aaKnown RBP13.61□□□□□ -0.23
HLCS-202ENST00000399120 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
HLCS-202ENST00000399120 GPRASP1Q5JY77 1395 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 FKBP4Q02790 459 aaKnown RBP eCLIP13.6□□□□□ -0.23
HLCS-202ENST00000399120 TWISTNBQ3B726 338 aaPredicted RBP13.6□□□□□ -0.23
HLCS-202ENST00000399120 ZSCAN31Q96LW9 406 aaPredicted RBP13.6□□□□□ -0.23
HLCS-202ENST00000399120 FHOD3Q2V2M9 1422 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 ANKRD18BA2A2Z9 1011 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 CCDC178Q5BJE1 867 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 PPP4R3AQ6IN85 833 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 LUZP1Q86V48 1076 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 SCLT1Q96NL6 688 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 FEZ1Q99689 392 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 TSG101Q99816 390 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 COMMD10Q9Y6G5 202 aa13.6□□□□□ -0.23
HLCS-202ENST00000399120 CASQ1P31415 396 aa13.59□□□□□ -0.23
HLCS-202ENST00000399120 FKBP15Q5T1M5 1219 aa13.59□□□□□ -0.23
HLCS-202ENST00000399120 MICALCLQ6ZW33 695 aa13.59□□□□□ -0.23
HLCS-202ENST00000399120 SPATA24Q86W54 205 aa13.59□□□□□ -0.23
HLCS-202ENST00000399120 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
HLCS-202ENST00000399120 LARP1Q6PKG0 1096 aaKnown RBP13.59□□□□□ -0.23
HLCS-202ENST00000399120 VPS36Q86VN1 386 aa13.59□□□□□ -0.23
HLCS-202ENST00000399120 PIBF1Q8WXW3 757 aa13.59□□□□□ -0.23
HLCS-202ENST00000399120 CTNNBL1Q8WYA6 563 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms