RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 VSIG10Q8N0Z9 540 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 PRKAR2BP31323 418 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 CCDC191Q8NCU4 936 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 CTNNA3Q9UI47 895 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 PCF11O94913 1555 aaKnown RBP9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 ZNF644Q9H582 1327 aaPredicted RBP9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 STK38Q15208 465 aa9.93□□□□□ -0.82
SPTLC3-201ENST00000399002 NSD2O96028 1365 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 ERLIN1O75477 346 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 CCDC57Q2TAC2 916 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 LEKR1Q6ZMV7 388 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 TRIM22Q8IYM9 498 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 EPRSP07814 1512 aaKnown RBP9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 CCDC27Q2M243 656 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 ANKRD18AQ8IVF6 992 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 CCAR1Q8IX12 1150 aaKnown RBP9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 R3HCC1Q9Y3T6 440 aaKnown RBP9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 SMTNL1A8MU46 457 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 KRT85P78386 507 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 ZRSR2Q15696 482 aaKnown RBP9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 RPAP2Q8IXW5 612 aaPredicted RBP9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 CFAP45Q9UL16 551 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 RAD21O60216 631 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 RAB11FIP3O75154 756 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 FAM69CQ0P6D2 419 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 CHD1LQ86WJ1 897 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 PPP6R1Q9UPN7 881 aa9.92□□□□□ -0.82
SPTLC3-201ENST00000399002 EIF3JO75822 258 aaKnown RBP9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 NEK4P51957 841 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 ATF7IPQ6VMQ6 1270 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 BACH2Q9BYV9 841 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 KIAA0586Q9BVV6 1533 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 THOC2Q8NI27 1593 aaKnown RBP9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 LAMC3Q9Y6N6 1575 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 FCHSD2O94868 740 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 SYCP1Q15431 976 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 WWC2Q6AWC2 1192 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 ABCA10Q8WWZ4 1543 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 KIF2AO00139 706 aaPredicted RBP9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 NLRP6P59044 892 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 CEP131Q9UPN4 1083 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 ALDH1L2Q3SY69 923 aa9.91□□□□□ -0.82
SPTLC3-201ENST00000399002 CCDC69A6NI79 296 aa9.9□□□□□ -0.82
SPTLC3-201ENST00000399002 PPFIBP1Q86W92 1011 aa9.9□□□□□ -0.82
SPTLC3-201ENST00000399002 TNMDQ9H2S6 317 aa9.9□□□□□ -0.82
SPTLC3-201ENST00000399002 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.82
SPTLC3-201ENST00000399002 CAMSAP2Q08AD1 1489 aa9.9□□□□□ -0.82
SPTLC3-201ENST00000399002 PRPF40AO75400 957 aaKnown RBP9.9□□□□□ -0.82
SPTLC3-201ENST00000399002 DNAJC2Q99543 621 aaKnown RBP9.9□□□□□ -0.82
SPTLC3-201ENST00000399002 GOLGA6L10A6NI86 522 aa9.9□□□□□ -0.83
SPTLC3-201ENST00000399002 MSH5O43196 834 aa9.9□□□□□ -0.83
SPTLC3-201ENST00000399002 CDK19Q9BWU1 502 aa9.9□□□□□ -0.83
SPTLC3-201ENST00000399002 NKTRP30414 1462 aaKnown RBP9.89□□□□□ -0.83
SPTLC3-201ENST00000399002 AIMP1Q12904 312 aaKnown RBP9.89□□□□□ -0.83
SPTLC3-201ENST00000399002 PDCL2Q8N4E4 241 aa9.89□□□□□ -0.83
SPTLC3-201ENST00000399002 THEMISQ8N1K5 641 aaPredicted RBP9.89□□□□□ -0.83
SPTLC3-201ENST00000399002 ABTB2Q8N961 1025 aa9.89□□□□□ -0.83
SPTLC3-201ENST00000399002 TAF3Q5VWG9 929 aa9.89□□□□□ -0.83
SPTLC3-201ENST00000399002 PRAM1Q96QH2 718 aa9.89□□□□□ -0.83
SPTLC3-201ENST00000399002 GRPEL1Q9HAV7 217 aa9.88□□□□□ -0.83
SPTLC3-201ENST00000399002 SYTL4Q96C24 671 aaPredicted RBP9.88□□□□□ -0.83
SPTLC3-201ENST00000399002 PDRG1Q9NUG6 133 aa9.88□□□□□ -0.83
SPTLC3-201ENST00000399002 WDR97A6NE52 1622 aa9.88□□□□□ -0.83
SPTLC3-201ENST00000399002 SERPINC1P01008 464 aa9.88□□□□□ -0.83
SPTLC3-201ENST00000399002 FOSBP53539 338 aa9.88□□□□□ -0.83
SPTLC3-201ENST00000399002 CFAP70Q5T0N1 1121 aa9.88□□□□□ -0.83
SPTLC3-201ENST00000399002 CNNM1Q9NRU3 951 aa9.88□□□□□ -0.83
SPTLC3-201ENST00000399002 HDGFL1Q5TGJ6 251 aa9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 SLC4A2P04920 1241 aa9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 MCM3P25205 808 aa9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 CEP57L1Q8IYX8 460 aa9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 MAGI1Q96QZ7 1491 aaPredicted RBP9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 GOLGA6L7A0A1B0GV03 622 aa9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 KRT18P05783 430 aaKnown RBP9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 CABP4P57796 275 aa9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 NFE2L2Q16236 605 aa9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 PHAXQ9H814 394 aaKnown RBP9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 AKNAQ7Z591 1439 aa9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 NSD3Q9BZ95 1437 aa9.87□□□□□ -0.83
SPTLC3-201ENST00000399002 SLFN5Q08AF3 891 aa9.86□□□□□ -0.83
SPTLC3-201ENST00000399002 NCOA1Q15788 1441 aa9.86□□□□□ -0.83
SPTLC3-201ENST00000399002 CCDC112Q8NEF3 446 aa9.86□□□□□ -0.83
SPTLC3-201ENST00000399002 H0YHG0 523 aa9.86□□□□□ -0.83
SPTLC3-201ENST00000399002 SOGA3Q5TF21 947 aa9.86□□□□□ -0.83
SPTLC3-201ENST00000399002 GBP3Q9H0R5 595 aa9.86□□□□□ -0.83
SPTLC3-201ENST00000399002 ITSN2Q9NZM3 1697 aa9.86□□□□□ -0.83
SPTLC3-201ENST00000399002 NUP62CLQ9H1M0 184 aa9.86□□□□□ -0.83
SPTLC3-201ENST00000399002 FYB1O15117 783 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 CCDC181Q5TID7 509 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 BLOC1S2Q6QNY1 142 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 SPATA32Q96LK8 384 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 DNAI2Q9GZS0 605 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 BIVM-ERCC5R4GMW8 1640 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 HMGB1P09429 215 aaKnown RBP9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 DESP17661 470 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 NAIPQ13075 1403 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms