RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 FAM83GA6ND36 823 aa24.27■■□□□ 1.48
MBD1-208ENST00000398493 CHRNA2Q15822 529 aa24.27■■□□□ 1.48
MBD1-208ENST00000398493 ARHGEF25Q86VW2 580 aa24.27■■□□□ 1.48
MBD1-208ENST00000398493 ADAMTS8Q9UP79 889 aa24.27■■□□□ 1.48
MBD1-208ENST00000398493 ANKRD26Q9UPS8 1709 aa24.25■■□□□ 1.47
MBD1-208ENST00000398493 MAP3K19Q56UN5 1328 aa24.25■■□□□ 1.47
MBD1-208ENST00000398493 EMILIN1Q9Y6C2 1016 aa24.24■■□□□ 1.47
MBD1-208ENST00000398493 CPDO75976 1380 aa24.24■■□□□ 1.47
MBD1-208ENST00000398493 PRDM11Q9NQV5 511 aa24.23■■□□□ 1.47
MBD1-208ENST00000398493 POLKQ9UBT6 870 aa24.23■■□□□ 1.47
MBD1-208ENST00000398493 AATKQ6ZMQ8 1374 aa24.22■■□□□ 1.47
MBD1-208ENST00000398493 C8orf37Q96NL8 207 aa24.22■■□□□ 1.47
MBD1-208ENST00000398493 AXIN2Q9Y2T1 843 aa24.22■■□□□ 1.47
MBD1-208ENST00000398493 SENP3-EIF4A1A0A087X0R7 540 aa24.21■■□□□ 1.47
MBD1-208ENST00000398493 MEX3CQ5U5Q3 659 aaKnown RBP24.21■■□□□ 1.47
MBD1-208ENST00000398493 SALL2Q9Y467 1007 aaPredicted RBP24.21■■□□□ 1.47
MBD1-208ENST00000398493 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
MBD1-208ENST00000398493 NGLY1Q96IV0 654 aa24.18■■□□□ 1.46
MBD1-208ENST00000398493 HOXC9P31274 260 aa24.17■■□□□ 1.46
MBD1-208ENST00000398493 AMPHP49418 695 aa24.17■■□□□ 1.46
MBD1-208ENST00000398493 IRX6P78412 446 aaPredicted RBP24.17■■□□□ 1.46
MBD1-208ENST00000398493 BTG4Q9NY30 223 aa24.17■■□□□ 1.46
MBD1-208ENST00000398493 MTHFSP49914 203 aa24.16■■□□□ 1.46
MBD1-208ENST00000398493 HSP90AB2PQ58FF8 381 aa24.15■■□□□ 1.46
MBD1-208ENST00000398493 IP6K1Q92551 441 aa24.15■■□□□ 1.46
MBD1-208ENST00000398493 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
MBD1-208ENST00000398493 PEAK1Q9H792 1746 aa24.15■■□□□ 1.46
MBD1-208ENST00000398493 MAP2P11137 1827 aaKnown RBP24.15■■□□□ 1.46
MBD1-208ENST00000398493 PPP4R2Q9NY27 417 aa24.14■■□□□ 1.46
MBD1-208ENST00000398493 CAMTA1Q9Y6Y1 1673 aa24.14■■□□□ 1.46
MBD1-208ENST00000398493 LTN1O94822 1766 aa24.14■■□□□ 1.46
MBD1-208ENST00000398493 RNF123Q5XPI4 1314 aa24.14■■□□□ 1.46
MBD1-208ENST00000398493 COL18A1P39060 1754 aa24.14■■□□□ 1.45
MBD1-208ENST00000398493 FNBP4Q8N3X1 1017 aaPredicted RBP24.14■■□□□ 1.45
MBD1-208ENST00000398493 NGEFQ8N5V2 710 aa24.14■■□□□ 1.45
MBD1-208ENST00000398493 SLIT2O94813 1529 aa24.13■■□□□ 1.45
MBD1-208ENST00000398493 LMO7Q8WWI1 1683 aa24.12■■□□□ 1.45
MBD1-208ENST00000398493 AFF2P51816 1311 aa24.11■■□□□ 1.45
MBD1-208ENST00000398493 COL14A1Q05707 1796 aaKnown RBP24.11■■□□□ 1.45
MBD1-208ENST00000398493 BCL9LQ86UU0 1499 aa24.11■■□□□ 1.45
MBD1-208ENST00000398493 FLT4P35916 1363 aa24.11■■□□□ 1.45
MBD1-208ENST00000398493 STRN4Q9NRL3 753 aa24.1■■□□□ 1.45
MBD1-208ENST00000398493 RTL1A6NKG5 1358 aa24.09■■□□□ 1.45
MBD1-208ENST00000398493 LTV1Q96GA3 475 aaPredicted RBP24.09■■□□□ 1.45
MBD1-208ENST00000398493 USP21Q9UK80 565 aa24.09■■□□□ 1.45
MBD1-208ENST00000398493 KIF24Q5T7B8 1368 aa24.08■■□□□ 1.45
MBD1-208ENST00000398493 RGS17Q9UGC6 210 aaPredicted RBP24.07■■□□□ 1.44
MBD1-208ENST00000398493 RCAN3Q9UKA8 241 aa24.07■■□□□ 1.44
MBD1-208ENST00000398493 PLCH1Q4KWH8 1693 aa24.07■■□□□ 1.44
MBD1-208ENST00000398493 COL5A2P05997 1499 aaPredicted RBP24.07■■□□□ 1.44
MBD1-208ENST00000398493 RGPD5Q99666 1765 aa24.07■■□□□ 1.44
MBD1-208ENST00000398493 UNC5CLQ8IV45 518 aa24.07■■□□□ 1.44
MBD1-208ENST00000398493 ANKRD24Q8TF21 1146 aa24.07■■□□□ 1.44
MBD1-208ENST00000398493 LARP1Q6PKG0 1096 aaKnown RBP24.06■■□□□ 1.44
MBD1-208ENST00000398493 ERBB3P21860 1342 aa24.06■■□□□ 1.44
MBD1-208ENST00000398493 CDCA7LQ96GN5 454 aa24.05■■□□□ 1.44
MBD1-208ENST00000398493 CDK12Q9NYV4 1490 aaPredicted RBP24.05■■□□□ 1.44
MBD1-208ENST00000398493 EVA1CP58658 441 aa24.05■■□□□ 1.44
MBD1-208ENST00000398493 ABCC6O95255 1503 aa24.04■■□□□ 1.44
MBD1-208ENST00000398493 GOLGA2Q08379 1002 aa24.04■■□□□ 1.44
MBD1-208ENST00000398493 EIF4A2Q14240 407 aaKnown RBP24.04■■□□□ 1.44
MBD1-208ENST00000398493 CCDC146Q8IYE0 955 aa24.03■■□□□ 1.44
MBD1-208ENST00000398493 CSB-PGBD3P0DP91 1061 aa24.02■■□□□ 1.44
MBD1-208ENST00000398493 NRAPQ86VF7 1730 aa24.02■■□□□ 1.44
MBD1-208ENST00000398493 WDR17Q8IZU2 1322 aa24.01■■□□□ 1.43
MBD1-208ENST00000398493 APAF1O14727 1248 aa24.01■■□□□ 1.43
MBD1-208ENST00000398493 NWD2Q9ULI1 1742 aa24.01■■□□□ 1.43
MBD1-208ENST00000398493 COL3A1P02461 1466 aaPredicted RBP24.01■■□□□ 1.43
MBD1-208ENST00000398493 IL13P35225 146 aa24■■□□□ 1.43
MBD1-208ENST00000398493 ZNF521Q96K83 1311 aa24■■□□□ 1.43
MBD1-208ENST00000398493 NBPF6Q5VWK0 638 aa24■■□□□ 1.43
MBD1-208ENST00000398493 NBPF4Q96M43 638 aa24■■□□□ 1.43
MBD1-208ENST00000398493 TOM1L2Q6ZVM7 507 aa23.99■■□□□ 1.43
MBD1-208ENST00000398493 PHF23Q9BUL5 403 aaPredicted RBP23.99■■□□□ 1.43
MBD1-208ENST00000398493 USP35Q9P2H5 1018 aa23.99■■□□□ 1.43
MBD1-208ENST00000398493 VPS72Q15906 364 aa23.98■■□□□ 1.43
MBD1-208ENST00000398493 RUNDC1Q96C34 613 aa23.98■■□□□ 1.43
MBD1-208ENST00000398493 QTRT2Q9H974 415 aaKnown RBP23.98■■□□□ 1.43
MBD1-208ENST00000398493 RRP1P56182 461 aaKnown RBP23.98■■□□□ 1.43
MBD1-208ENST00000398493 ZNF772Q68DY9 489 aaPredicted RBP23.98■■□□□ 1.43
MBD1-208ENST00000398493 NLRP2Q9NX02 1062 aa23.98■■□□□ 1.43
MBD1-208ENST00000398493 DIAPH1O60610 1272 aaKnown RBP23.97■■□□□ 1.43
MBD1-208ENST00000398493 USHBP1Q8N6Y0 703 aa23.97■■□□□ 1.43
MBD1-208ENST00000398493 EYA1Q99502 592 aa23.97■■□□□ 1.43
MBD1-208ENST00000398493 ATRNO75882 1429 aa23.97■■□□□ 1.43
MBD1-208ENST00000398493 ILDR2Q71H61 639 aa23.96■■□□□ 1.43
MBD1-208ENST00000398493 TRPC5Q9UL62 973 aaPredicted RBP23.96■■□□□ 1.43
MBD1-208ENST00000398493 CCDC9Q9Y3X0 531 aaKnown RBP23.96■■□□□ 1.43
MBD1-208ENST00000398493 SPATA31A5Q5VU36 1347 aa23.96■■□□□ 1.43
MBD1-208ENST00000398493 SPATA31A7Q8IWB4 1347 aa23.96■■□□□ 1.43
MBD1-208ENST00000398493 POTEAQ6S8J7 498 aa23.96■■□□□ 1.43
MBD1-208ENST00000398493 CRB1P82279 1406 aa23.95■■□□□ 1.43
MBD1-208ENST00000398493 SPATA31A1Q5TZJ5 1347 aa23.95■■□□□ 1.42
MBD1-208ENST00000398493 CARD10Q9BWT7 1032 aa23.94■■□□□ 1.42
MBD1-208ENST00000398493 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.94■■□□□ 1.42
MBD1-208ENST00000398493 SLFN5Q08AF3 891 aa23.94■■□□□ 1.42
MBD1-208ENST00000398493 GJD4Q96KN9 370 aaPredicted RBP23.94■■□□□ 1.42
MBD1-208ENST00000398493 DUSP27Q5VZP5 1158 aa23.93■■□□□ 1.42
MBD1-208ENST00000398493 RGPD2P0DJD1 1756 aa23.92■■□□□ 1.42
MBD1-208ENST00000398493 E9PSI1 815 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms