RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 ECM1Q16610 540 aa9.44□□□□□ -0.9
CEP290-202ENST00000397838 SWI5Q1ZZU3 235 aa9.44□□□□□ -0.9
CEP290-202ENST00000397838 DNAAF2Q9NVR5 837 aaKnown RBP9.44□□□□□ -0.9
CEP290-202ENST00000397838 SFI1A8K8P3 1242 aa9.43□□□□□ -0.9
CEP290-202ENST00000397838 EML3Q32P44 896 aa9.43□□□□□ -0.9
CEP290-202ENST00000397838 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
CEP290-202ENST00000397838 PURBQ96QR8 312 aaKnown RBP9.43□□□□□ -0.9
CEP290-202ENST00000397838 SEPT3Q9UH03 358 aa9.43□□□□□ -0.9
CEP290-202ENST00000397838 ZC3H4Q9UPT8 1303 aaKnown RBP9.43□□□□□ -0.9
CEP290-202ENST00000397838 TCF3P15923 654 aa9.42□□□□□ -0.9
CEP290-202ENST00000397838 MKNK1Q9BUB5 465 aa9.42□□□□□ -0.9
CEP290-202ENST00000397838 OXLD1Q5BKU9 147 aa9.42□□□□□ -0.9
CEP290-202ENST00000397838 LAPTM4BQ86VI4 370 aa9.42□□□□□ -0.9
CEP290-202ENST00000397838 FAM160A2Q8N612 972 aaPredicted RBP9.42□□□□□ -0.9
CEP290-202ENST00000397838 CCNYL3P0C7X3 344 aa9.41□□□□□ -0.9
CEP290-202ENST00000397838 ERCC3P19447 782 aa9.41□□□□□ -0.9
CEP290-202ENST00000397838 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
CEP290-202ENST00000397838 EVA1BQ9NVM1 165 aa9.41□□□□□ -0.9
CEP290-202ENST00000397838 CXXC1Q9P0U4 656 aaPredicted RBP9.41□□□□□ -0.9
CEP290-202ENST00000397838 PTK2Q05397 1052 aa9.41□□□□□ -0.9
CEP290-202ENST00000397838 FBXO33Q7Z6M2 555 aa9.41□□□□□ -0.9
CEP290-202ENST00000397838 LRCH3Q96II8 777 aa9.41□□□□□ -0.9
CEP290-202ENST00000397838 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
CEP290-202ENST00000397838 TAS1R3Q7RTX0 852 aa9.4□□□□□ -0.9
CEP290-202ENST00000397838 SIX5Q8N196 739 aa9.4□□□□□ -0.9
CEP290-202ENST00000397838 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.9
CEP290-202ENST00000397838 SALL2Q9Y467 1007 aaPredicted RBP9.4□□□□□ -0.9
CEP290-202ENST00000397838 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.91
CEP290-202ENST00000397838 NBPF3Q9H094 633 aa9.4□□□□□ -0.91
CEP290-202ENST00000397838 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
CEP290-202ENST00000397838 RECKO95980 971 aa9.39□□□□□ -0.91
CEP290-202ENST00000397838 TPCN2Q8NHX9 752 aa9.39□□□□□ -0.91
CEP290-202ENST00000397838 C1orf216Q8TAB5 229 aa9.39□□□□□ -0.91
CEP290-202ENST00000397838 ERBB3P21860 1342 aa9.39□□□□□ -0.91
CEP290-202ENST00000397838 BCAMP50895 628 aa9.39□□□□□ -0.91
CEP290-202ENST00000397838 GTF2IP78347 998 aa9.39□□□□□ -0.91
CEP290-202ENST00000397838 PTCRAQ6ISU1 281 aaPredicted RBP9.39□□□□□ -0.91
CEP290-202ENST00000397838 GPSM3Q9Y4H4 160 aa9.39□□□□□ -0.91
CEP290-202ENST00000397838 DNMT3AQ9Y6K1 912 aaPredicted RBP9.39□□□□□ -0.91
CEP290-202ENST00000397838 CCDC102BQ68D86 513 aa9.38□□□□□ -0.91
CEP290-202ENST00000397838 ARHGAP9Q9BRR9 750 aa9.38□□□□□ -0.91
CEP290-202ENST00000397838 DOLKQ9UPQ8 538 aa9.38□□□□□ -0.91
CEP290-202ENST00000397838 GIGYF1O75420 1035 aaPredicted RBP9.37□□□□□ -0.91
CEP290-202ENST00000397838 ICMTO60725 284 aa9.37□□□□□ -0.91
CEP290-202ENST00000397838 DXOO77932 396 aaKnown RBP9.37□□□□□ -0.91
CEP290-202ENST00000397838 ARHGAP4P98171 946 aa9.37□□□□□ -0.91
CEP290-202ENST00000397838 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
CEP290-202ENST00000397838 SH3BP5LQ7L8J4 393 aa9.37□□□□□ -0.91
CEP290-202ENST00000397838 LARGE2Q8N3Y3 721 aa9.37□□□□□ -0.91
CEP290-202ENST00000397838 GTF3C2Q8WUA4 911 aaPredicted RBP9.37□□□□□ -0.91
CEP290-202ENST00000397838 NOD1Q9Y239 953 aa9.37□□□□□ -0.91
CEP290-202ENST00000397838 PCDHB3Q9Y5E6 796 aa9.37□□□□□ -0.91
CEP290-202ENST00000397838 MAGEB6P1A0A0J9YX57 407 aa9.36□□□□□ -0.91
CEP290-202ENST00000397838 MRPL50Q8N5N7 158 aaKnown RBP9.36□□□□□ -0.91
CEP290-202ENST00000397838 MAPK1P28482 360 aa9.36□□□□□ -0.91
CEP290-202ENST00000397838 GLYCTKQ8IVS8 523 aa9.36□□□□□ -0.91
CEP290-202ENST00000397838 PCDHGA11Q9Y5H2 935 aa9.36□□□□□ -0.91
CEP290-202ENST00000397838 SEC13P55735 322 aa9.35□□□□□ -0.91
CEP290-202ENST00000397838 FKBP5Q13451 457 aaPredicted RBP9.35□□□□□ -0.91
CEP290-202ENST00000397838 TSEN2Q8NCE0 465 aaKnown RBP9.35□□□□□ -0.91
CEP290-202ENST00000397838 MARVELD3Q96A59 401 aa9.35□□□□□ -0.91
CEP290-202ENST00000397838 HPS5Q9UPZ3 1129 aa9.35□□□□□ -0.91
CEP290-202ENST00000397838 TLL1O43897 1013 aa9.34□□□□□ -0.91
CEP290-202ENST00000397838 ATP1A2P50993 1020 aa9.34□□□□□ -0.91
CEP290-202ENST00000397838 UNC93B1Q9H1C4 597 aa9.34□□□□□ -0.91
CEP290-202ENST00000397838 SNPHO15079 494 aa9.34□□□□□ -0.91
CEP290-202ENST00000397838 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
CEP290-202ENST00000397838 C4orf48Q5BLP8 95 aa9.34□□□□□ -0.91
CEP290-202ENST00000397838 NBPF14Q5TI25 921 aa9.34□□□□□ -0.91
CEP290-202ENST00000397838 ZBTB33Q86T24 672 aa9.34□□□□□ -0.91
CEP290-202ENST00000397838 TRIM50Q86XT4 487 aa9.34□□□□□ -0.91
CEP290-202ENST00000397838 PSME1Q06323 249 aa9.33□□□□□ -0.92
CEP290-202ENST00000397838 SH3RF1Q7Z6J0 888 aa9.33□□□□□ -0.92
CEP290-202ENST00000397838 FAM177A1Q8N128 213 aaPredicted RBP9.33□□□□□ -0.92
CEP290-202ENST00000397838 EGFL7Q9UHF1 273 aa9.33□□□□□ -0.92
CEP290-202ENST00000397838 C21orf2O43822 256 aa9.32□□□□□ -0.92
CEP290-202ENST00000397838 MMP16P51512 607 aa9.32□□□□□ -0.92
CEP290-202ENST00000397838 COPS2P61201 443 aa9.32□□□□□ -0.92
CEP290-202ENST00000397838 SPSB2Q99619 263 aa9.32□□□□□ -0.92
CEP290-202ENST00000397838 HINFPQ9BQA5 517 aa9.32□□□□□ -0.92
CEP290-202ENST00000397838 STAU1O95793 577 aaKnown RBP9.32□□□□□ -0.92
CEP290-202ENST00000397838 PPP4CP60510 307 aa9.32□□□□□ -0.92
CEP290-202ENST00000397838 NAA30Q147X3 362 aaPredicted RBP9.32□□□□□ -0.92
CEP290-202ENST00000397838 MSS51Q4VC12 460 aa9.32□□□□□ -0.92
CEP290-202ENST00000397838 DZIP3Q86Y13 1208 aaKnown RBP9.32□□□□□ -0.92
CEP290-202ENST00000397838 TSNAXIP1Q2TAA8 658 aa9.31□□□□□ -0.92
CEP290-202ENST00000397838 ASB16Q96NS5 453 aa9.31□□□□□ -0.92
CEP290-202ENST00000397838 POTEB3A0JP26 581 aa9.31□□□□□ -0.92
CEP290-202ENST00000397838 NR1I2O75469 434 aa9.31□□□□□ -0.92
CEP290-202ENST00000397838 POTEBQ6S5H4 581 aa9.31□□□□□ -0.92
CEP290-202ENST00000397838 GPKOWQ92917 476 aaPredicted RBP eCLIP9.31□□□□□ -0.922e-6■■■■□ 25.2
CEP290-202ENST00000397838 ZNF326Q5BKZ1 582 aaKnown RBP9.3□□□□□ -0.92
CEP290-202ENST00000397838 FOXJ1Q92949 421 aa9.3□□□□□ -0.92
CEP290-202ENST00000397838 ERFEQ4G0M1 354 aa9.3□□□□□ -0.92
CEP290-202ENST00000397838 MAMSTRQ6ZN01 415 aa9.3□□□□□ -0.92
CEP290-202ENST00000397838 RNF19AQ9NV58 838 aa9.3□□□□□ -0.92
CEP290-202ENST00000397838 DCTN4Q9UJW0 460 aa9.3□□□□□ -0.92
CEP290-202ENST00000397838 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
CEP290-202ENST00000397838 WEE1P30291 646 aa9.29□□□□□ -0.92
CEP290-202ENST00000397838 C9orf131Q5VYM1 1079 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms