RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 ERBINQ96RT1 1412 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 CAVIN1Q6NZI2 390 aaKnown RBP7.41□□□□□ -1.22
PGBD4-201ENST00000397766 FAM13BQ9NYF5 915 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 TRAK2O60296 914 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 SMC2O95347 1197 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 CCDC57Q2TAC2 916 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 IKQ13123 557 aaPredicted RBP7.41□□□□□ -1.22
PGBD4-201ENST00000397766 CNNM1Q9NRU3 951 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 CTNNA3Q9UI47 895 aa7.41□□□□□ -1.22
PGBD4-201ENST00000397766 CCDC192P0DO97 292 aa7.4□□□□□ -1.22
PGBD4-201ENST00000397766 NEK4P51957 841 aa7.4□□□□□ -1.22
PGBD4-201ENST00000397766 ESCO1Q5FWF5 840 aa7.4□□□□□ -1.22
PGBD4-201ENST00000397766 KRT18P05783 430 aaKnown RBP7.4□□□□□ -1.22
PGBD4-201ENST00000397766 KRT32Q14532 448 aa7.4□□□□□ -1.22
PGBD4-201ENST00000397766 TXNDC2Q86VQ3 553 aa7.4□□□□□ -1.22
PGBD4-201ENST00000397766 WASF1Q92558 559 aa7.4□□□□□ -1.22
PGBD4-201ENST00000397766 RTEL1-TNFRSF6BF6WH68 1400 aa7.4□□□□□ -1.22
PGBD4-201ENST00000397766 PATL2C9JE40 543 aaKnown RBP7.4□□□□□ -1.22
PGBD4-201ENST00000397766 CCDC191Q8NCU4 936 aa7.4□□□□□ -1.22
PGBD4-201ENST00000397766 NOB1Q9ULX3 412 aaKnown RBP7.4□□□□□ -1.22
PGBD4-201ENST00000397766 CIZ1Q9ULV3 898 aaPredicted RBP7.4□□□□□ -1.23
PGBD4-201ENST00000397766 TROQ12816 1431 aaPredicted RBP7.4□□□□□ -1.23
PGBD4-201ENST00000397766 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.4□□□□□ -1.23
PGBD4-201ENST00000397766 CCDC69A6NI79 296 aa7.4□□□□□ -1.23
PGBD4-201ENST00000397766 CABP4P57796 275 aa7.4□□□□□ -1.23
PGBD4-201ENST00000397766 ANKRD18AQ8IVF6 992 aa7.4□□□□□ -1.23
PGBD4-201ENST00000397766 PRAM1Q96QH2 718 aa7.4□□□□□ -1.23
PGBD4-201ENST00000397766 CFAP70Q5T0N1 1121 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 HDGFL1Q5TGJ6 251 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 TMEM132EQ6IEE7 984 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 IQCEQ6IPM2 695 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 SYNJ1O43426 1573 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 CCDC66A2RUB6 948 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 ZRSR2Q15696 482 aaKnown RBP7.39□□□□□ -1.23
PGBD4-201ENST00000397766 DNAJC5BQ9UF47 199 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.39□□□□□ -1.23
PGBD4-201ENST00000397766 SOGA3Q5TF21 947 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 RBM42Q9BTD8 480 aaKnown RBP7.39□□□□□ -1.23
PGBD4-201ENST00000397766 CDK19Q9BWU1 502 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 K7ELQ4 463 aaPredicted RBP7.39□□□□□ -1.23
PGBD4-201ENST00000397766 SLC4A2P04920 1241 aa7.39□□□□□ -1.23
PGBD4-201ENST00000397766 MVPQ14764 893 aaKnown RBP7.39□□□□□ -1.23
PGBD4-201ENST00000397766 CCDC141Q6ZP82 1450 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 ZFYVE27Q5T4F4 411 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 PPFIBP1Q86W92 1011 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 RPAP2Q8IXW5 612 aaPredicted RBP7.38□□□□□ -1.23
PGBD4-201ENST00000397766 TMEM132AQ24JP5 1023 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 KRT85P78386 507 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 PPP6R1Q9UPN7 881 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 TOM1O60784 492 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 PRPF40AO75400 957 aaKnown RBP7.38□□□□□ -1.23
PGBD4-201ENST00000397766 CFTRP13569 1480 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 ERLIN1O75477 346 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 FCHSD2O94868 740 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 SNAPC4Q5SXM2 1469 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 LAMC3Q9Y6N6 1575 aa7.38□□□□□ -1.23
PGBD4-201ENST00000397766 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 VSIG10Q8N0Z9 540 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 POLA1P09884 1462 aaPredicted RBP7.37□□□□□ -1.23
PGBD4-201ENST00000397766 ATF7IPQ6VMQ6 1270 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 CALRP27797 417 aaKnown RBP7.37□□□□□ -1.23
PGBD4-201ENST00000397766 ZNF530Q6P9A1 599 aaPredicted RBP7.37□□□□□ -1.23
PGBD4-201ENST00000397766 TNMDQ9H2S6 317 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 CFAP45Q9UL16 551 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 GOLGA6L10A6NI86 522 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 SERPINC1P01008 464 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 UBAP1LF5GYI3 381 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 CEP131Q9UPN4 1083 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 LEKR1Q6ZMV7 388 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 PDRG1Q9NUG6 133 aa7.37□□□□□ -1.23
PGBD4-201ENST00000397766 SMTNL1A8MU46 457 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 DESP17661 470 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 CHD1LQ86WJ1 897 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 BMP2KQ9NSY1 1161 aaPredicted RBP7.36□□□□□ -1.23
PGBD4-201ENST00000397766 NESP48681 1621 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 ABCC11Q96J66 1382 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 RAB11FIP3O75154 756 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 SAMD1Q6SPF0 538 aaPredicted RBP7.36□□□□□ -1.23
PGBD4-201ENST00000397766 PLEKHH1Q9ULM0 1364 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 SULT6B1Q6IMI4 303 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 KCNH5Q8NCM2 988 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 ARAP1Q96P48 1450 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 H0YHG0 523 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 CEP57L1Q8IYX8 460 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 AFAP1Q8N556 730 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 IL27Q8NEV9 243 aa7.36□□□□□ -1.23
PGBD4-201ENST00000397766 FIBPO43427 364 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 EIF3JO75822 258 aaKnown RBP7.35□□□□□ -1.23
PGBD4-201ENST00000397766 BLOC1S2Q6QNY1 142 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 DNAI2Q9GZS0 605 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 ZNF287Q9HBT7 754 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 CABP1Q9NZU7 370 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 CCDC181Q5TID7 509 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 RNF214Q8ND24 703 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 MPHOSPH8Q99549 860 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 TIAM1Q13009 1591 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 SUPT6HQ7KZ85 1726 aaKnown RBP7.35□□□□□ -1.23
PGBD4-201ENST00000397766 AACSQ86V21 672 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 DEF6Q9H4E7 631 aa7.35□□□□□ -1.23
PGBD4-201ENST00000397766 ME1P48163 572 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms