RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 NEUROD6Q96NK8 337 aa17.76■□□□□ 0.43
CHL1-202ENST00000397491 GOLGA6L7A0A1B0GV03 622 aa17.76■□□□□ 0.43
CHL1-202ENST00000397491 KLHL40Q2TBA0 621 aa17.76■□□□□ 0.43
CHL1-202ENST00000397491 MYO6Q9UM54 1294 aa17.76■□□□□ 0.43
CHL1-202ENST00000397491 ADCY5O95622 1261 aa17.75■□□□□ 0.43
CHL1-202ENST00000397491 GNAI2P04899 355 aa17.75■□□□□ 0.43
CHL1-202ENST00000397491 SFPQP23246 707 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHL1-202ENST00000397491 ANKRD1Q15327 319 aa17.75■□□□□ 0.43
CHL1-202ENST00000397491 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
CHL1-202ENST00000397491 URI1O94763 535 aaPredicted RBP17.75■□□□□ 0.43
CHL1-202ENST00000397491 CUX1P39880 1505 aa17.75■□□□□ 0.43
CHL1-202ENST00000397491 BAG4O95429 457 aaKnown RBP17.75■□□□□ 0.43
CHL1-202ENST00000397491 CCDC181Q5TID7 509 aa17.74■□□□□ 0.43
CHL1-202ENST00000397491 CLIP2Q9UDT6 1046 aa17.74■□□□□ 0.43
CHL1-202ENST00000397491 HIP1O00291 1037 aa17.74■□□□□ 0.43
CHL1-202ENST00000397491 IBSPP21815 317 aaPredicted RBP17.74■□□□□ 0.43
CHL1-202ENST00000397491 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
CHL1-202ENST00000397491 JMYQ8N9B5 988 aa17.74■□□□□ 0.43
CHL1-202ENST00000397491 IPO4Q8TEX9 1081 aaKnown RBP17.74■□□□□ 0.43
CHL1-202ENST00000397491 TBC1D32Q96NH3 1257 aa17.74■□□□□ 0.43
CHL1-202ENST00000397491 MAP4K4O95819 1239 aaPredicted RBP17.74■□□□□ 0.43
CHL1-202ENST00000397491 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
CHL1-202ENST00000397491 ZNHIT6Q9NWK9 470 aaKnown RBP17.74■□□□□ 0.43
CHL1-202ENST00000397491 RBM27Q9P2N5 1060 aaKnown RBP17.74■□□□□ 0.43
CHL1-202ENST00000397491 CFAP45Q9UL16 551 aa17.74■□□□□ 0.43
CHL1-202ENST00000397491 TRMT1Q9NXH9 659 aaKnown RBP17.73■□□□□ 0.43
CHL1-202ENST00000397491 PDRG1Q9NUG6 133 aa17.73■□□□□ 0.43
CHL1-202ENST00000397491 ZSCAN23Q3MJ62 389 aa17.73■□□□□ 0.43
CHL1-202ENST00000397491 DHX16O60231 1041 aaKnown RBP17.72■□□□□ 0.43
CHL1-202ENST00000397491 TMEM57Q8N5G2 664 aa17.72■□□□□ 0.43
CHL1-202ENST00000397491 SHTN1A0MZ66 631 aa17.72■□□□□ 0.43
CHL1-202ENST00000397491 CT47A1Q5JQC4 288 aaPredicted RBP17.72■□□□□ 0.43
CHL1-202ENST00000397491 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
CHL1-202ENST00000397491 GBP3Q9H0R5 595 aa17.72■□□□□ 0.43
CHL1-202ENST00000397491 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
CHL1-202ENST00000397491 PPP6R1Q9UPN7 881 aa17.72■□□□□ 0.43
CHL1-202ENST00000397491 NCAPD3P42695 1498 aa17.72■□□□□ 0.43
CHL1-202ENST00000397491 EPS15P42566 896 aa17.72■□□□□ 0.43
CHL1-202ENST00000397491 HSP90AB2PQ58FF8 381 aa17.72■□□□□ 0.43
CHL1-202ENST00000397491 ZSCAN31Q96LW9 406 aaPredicted RBP17.72■□□□□ 0.43
CHL1-202ENST00000397491 CRACR2AQ9BSW2 395 aa17.72■□□□□ 0.43
CHL1-202ENST00000397491 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
CHL1-202ENST00000397491 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.43
CHL1-202ENST00000397491 BRMS1Q9HCU9 246 aa17.71■□□□□ 0.43
CHL1-202ENST00000397491 DACH1Q9UI36 760 aa17.71■□□□□ 0.43
CHL1-202ENST00000397491 CFAP100Q494V2 611 aa17.71■□□□□ 0.43
CHL1-202ENST00000397491 ODF2Q5BJF6 829 aa17.71■□□□□ 0.43
CHL1-202ENST00000397491 FAM69CQ0P6D2 419 aa17.71■□□□□ 0.43
CHL1-202ENST00000397491 KRT222Q8N1A0 295 aa17.71■□□□□ 0.43
CHL1-202ENST00000397491 GTPBP4Q9BZE4 634 aaKnown RBP17.71■□□□□ 0.43
CHL1-202ENST00000397491 LRRFIP2Q9Y608 721 aaKnown RBP17.71■□□□□ 0.43
CHL1-202ENST00000397491 ANKRD50Q9ULJ7 1429 aa17.71■□□□□ 0.43
CHL1-202ENST00000397491 XBP1P17861 261 aa17.71■□□□□ 0.42
CHL1-202ENST00000397491 CCDC94Q9BW85 323 aaPredicted RBP17.71■□□□□ 0.42
CHL1-202ENST00000397491 DNAJC2Q99543 621 aaKnown RBP17.7■□□□□ 0.42
CHL1-202ENST00000397491 RRAGDQ9NQL2 400 aaPredicted RBP17.7■□□□□ 0.42
CHL1-202ENST00000397491 ARHGAP29Q52LW3 1261 aa17.7■□□□□ 0.42
CHL1-202ENST00000397491 CABP2Q9NPB3 220 aa17.7■□□□□ 0.42
CHL1-202ENST00000397491 SMTNL1A8MU46 457 aa17.7■□□□□ 0.42
CHL1-202ENST00000397491 BMS1Q14692 1282 aaKnown RBP17.7■□□□□ 0.42
CHL1-202ENST00000397491 ZNF830Q96NB3 372 aaPredicted RBP17.7■□□□□ 0.42
CHL1-202ENST00000397491 STAC3Q96MF2 364 aa17.7■□□□□ 0.42
CHL1-202ENST00000397491 GDPD2Q9HCC8 539 aa17.7■□□□□ 0.42
CHL1-202ENST00000397491 NOLC1Q14978 699 aaKnown RBP eCLIP17.69■□□□□ 0.42
CHL1-202ENST00000397491 BLOC1S2Q6QNY1 142 aa17.69■□□□□ 0.42
CHL1-202ENST00000397491 NCOA2Q15596 1464 aa17.69■□□□□ 0.42
CHL1-202ENST00000397491 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
CHL1-202ENST00000397491 ZSCAN12O43309 604 aa17.69■□□□□ 0.42
CHL1-202ENST00000397491 TTC5Q8N0Z6 440 aa17.69■□□□□ 0.42
CHL1-202ENST00000397491 ZKSCAN5Q9Y2L8 839 aa17.69■□□□□ 0.42
CHL1-202ENST00000397491 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
CHL1-202ENST00000397491 IQCEQ6IPM2 695 aa17.68■□□□□ 0.42
CHL1-202ENST00000397491 ERLIN2O94905 339 aa17.68■□□□□ 0.42
CHL1-202ENST00000397491 LMAN1P49257 510 aa17.68■□□□□ 0.42
CHL1-202ENST00000397491 AIMP1Q12904 312 aaKnown RBP17.68■□□□□ 0.42
CHL1-202ENST00000397491 CCDC30Q5VVM6 783 aa17.68■□□□□ 0.42
CHL1-202ENST00000397491 JAKMIP3Q5VZ66 844 aa17.67■□□□□ 0.42
CHL1-202ENST00000397491 GTF2E1P29083 439 aaPredicted RBP17.67■□□□□ 0.42
CHL1-202ENST00000397491 CKAP2LQ8IYA6 745 aa17.67■□□□□ 0.42
CHL1-202ENST00000397491 EPB41L2O43491 1005 aaKnown RBP17.67■□□□□ 0.42
CHL1-202ENST00000397491 CWC27Q6UX04 472 aaKnown RBP17.67■□□□□ 0.42
CHL1-202ENST00000397491 ZFP91Q96JP5 570 aaPredicted RBP17.67■□□□□ 0.42
CHL1-202ENST00000397491 LRSAM1Q6UWE0 723 aa17.67■□□□□ 0.42
CHL1-202ENST00000397491 SRCIN1Q9C0H9 1055 aa17.67■□□□□ 0.42
CHL1-202ENST00000397491 FBXO3Q9UK99 471 aa17.67■□□□□ 0.42
CHL1-202ENST00000397491 IGSF3O75054 1194 aa17.66■□□□□ 0.42
CHL1-202ENST00000397491 CASQ1P31415 396 aa17.66■□□□□ 0.42
CHL1-202ENST00000397491 RARSP54136 660 aaKnown RBP17.66■□□□□ 0.42
CHL1-202ENST00000397491 CCDC83Q8IWF9 413 aa17.66■□□□□ 0.42
CHL1-202ENST00000397491 GTF2A1P52655 376 aaPredicted RBP17.66■□□□□ 0.42
CHL1-202ENST00000397491 RIC3Q7Z5B4 369 aa17.66■□□□□ 0.42
CHL1-202ENST00000397491 CASTP20810 708 aaKnown RBP17.66■□□□□ 0.42
CHL1-202ENST00000397491 PAXBP1Q9Y5B6 917 aa17.66■□□□□ 0.42
CHL1-202ENST00000397491 IGHDP01880 384 aa17.66■□□□□ 0.42
CHL1-202ENST00000397491 UVSSAQ2YD98 709 aa17.65■□□□□ 0.42
CHL1-202ENST00000397491 STK11IPQ8N1F8 1099 aa17.65■□□□□ 0.42
CHL1-202ENST00000397491 NEMFO60524 1076 aa17.65■□□□□ 0.42
CHL1-202ENST00000397491 PDIA4P13667 645 aaKnown RBP17.65■□□□□ 0.42
CHL1-202ENST00000397491 RBM25P49756 843 aaKnown RBP17.65■□□□□ 0.42
CHL1-202ENST00000397491 CEP135Q66GS9 1140 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms