RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SBNO2Q9Y2G9 1366 aa18.26■□□□□ 0.51
SEC13-209ENST00000397117 SBF2Q86WG5 1849 aa18.26■□□□□ 0.51
SEC13-209ENST00000397117 SRPK2P78362 688 aaKnown RBP18.25■□□□□ 0.51
SEC13-209ENST00000397117 CABP2Q9NPB3 220 aa18.25■□□□□ 0.51
SEC13-209ENST00000397117 CRB1P82279 1406 aa18.25■□□□□ 0.51
SEC13-209ENST00000397117 QRICH2Q9H0J4 1663 aa18.23■□□□□ 0.51
SEC13-209ENST00000397117 COL18A1P39060 1754 aa18.23■□□□□ 0.51
SEC13-209ENST00000397117 AATKQ6ZMQ8 1374 aa18.23■□□□□ 0.51
SEC13-209ENST00000397117 RGPD3A6NKT7 1758 aaPredicted RBP18.22■□□□□ 0.51
SEC13-209ENST00000397117 RGPD4Q7Z3J3 1758 aa18.22■□□□□ 0.51
SEC13-209ENST00000397117 SPON1Q9HCB6 807 aa18.22■□□□□ 0.51
SEC13-209ENST00000397117 USP6P35125 1406 aa18.22■□□□□ 0.51
SEC13-209ENST00000397117 SLIT3O75094 1523 aa18.22■□□□□ 0.51
SEC13-209ENST00000397117 PLSCR1O15162 318 aa18.21■□□□□ 0.51
SEC13-209ENST00000397117 KCNQ2O43526 872 aa18.21■□□□□ 0.51
SEC13-209ENST00000397117 NLRP6P59044 892 aa18.21■□□□□ 0.51
SEC13-209ENST00000397117 CABP1Q9NZU7 370 aa18.21■□□□□ 0.51
SEC13-209ENST00000397117 OVOS2A0A0G2JMS6 1433 aa18.2■□□□□ 0.5
SEC13-209ENST00000397117 OVOS2A0A0J9YW53 1432 aa18.2■□□□□ 0.5
SEC13-209ENST00000397117 OVOS2Q6IE36 1432 aa18.2■□□□□ 0.5
SEC13-209ENST00000397117 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
SEC13-209ENST00000397117 LRRC37A3O60309 1634 aa18.2■□□□□ 0.5
SEC13-209ENST00000397117 ZBTB7CA1YPR0 619 aa18.18■□□□□ 0.5
SEC13-209ENST00000397117 YY1P25490 414 aa18.18■□□□□ 0.5
SEC13-209ENST00000397117 DDB1Q16531 1140 aa18.18■□□□□ 0.5
SEC13-209ENST00000397117 AXIN2Q9Y2T1 843 aa18.18■□□□□ 0.5
SEC13-209ENST00000397117 WNK3Q9BYP7 1800 aa18.18■□□□□ 0.5
SEC13-209ENST00000397117 PIK3C2AO00443 1686 aa18.17■□□□□ 0.5
SEC13-209ENST00000397117 PTF1AQ7RTS3 328 aa18.17■□□□□ 0.5
SEC13-209ENST00000397117 BCL11BQ9C0K0 894 aaPredicted RBP18.17■□□□□ 0.5
SEC13-209ENST00000397117 RGPD5Q99666 1765 aa18.16■□□□□ 0.5
SEC13-209ENST00000397117 TOM1L2Q6ZVM7 507 aa18.16■□□□□ 0.5
SEC13-209ENST00000397117 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
SEC13-209ENST00000397117 NINLQ9Y2I6 1382 aa18.16■□□□□ 0.5
SEC13-209ENST00000397117 CASZ1Q86V15 1759 aa18.16■□□□□ 0.5
SEC13-209ENST00000397117 PROM2Q8N271 834 aa18.16■□□□□ 0.5
SEC13-209ENST00000397117 WDR17Q8IZU2 1322 aa18.15■□□□□ 0.5
SEC13-209ENST00000397117 MARCH10Q8NA82 808 aaPredicted RBP18.15■□□□□ 0.5
SEC13-209ENST00000397117 ANO8Q9HCE9 1232 aaPredicted RBP18.15■□□□□ 0.5
SEC13-209ENST00000397117 BCL9O00512 1426 aa18.15■□□□□ 0.5
SEC13-209ENST00000397117 ARHGEF25Q86VW2 580 aa18.14■□□□□ 0.49
SEC13-209ENST00000397117 PUS7Q96PZ0 661 aaKnown RBP18.14■□□□□ 0.49
SEC13-209ENST00000397117 CDCA7Q9BWT1 371 aaPredicted RBP18.14■□□□□ 0.49
SEC13-209ENST00000397117 AKAP12Q02952 1782 aa18.14■□□□□ 0.49
SEC13-209ENST00000397117 CPSF1Q10570 1443 aaKnown RBP18.13■□□□□ 0.49
SEC13-209ENST00000397117 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
SEC13-209ENST00000397117 CARD10Q9BWT7 1032 aa18.12■□□□□ 0.49
SEC13-209ENST00000397117 TTC21BQ7Z4L5 1316 aa18.11■□□□□ 0.49
SEC13-209ENST00000397117 PDGFDQ9GZP0 370 aaPredicted RBP18.11■□□□□ 0.49
SEC13-209ENST00000397117 DCAF8L1A6NGE4 600 aa18.1■□□□□ 0.49
SEC13-209ENST00000397117 ANP32CO43423 234 aa18.1■□□□□ 0.49
SEC13-209ENST00000397117 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
SEC13-209ENST00000397117 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
SEC13-209ENST00000397117 MIER1Q8N108 512 aa18.09■□□□□ 0.49
SEC13-209ENST00000397117 PANK3Q9H999 370 aa18.09■□□□□ 0.49
SEC13-209ENST00000397117 TTC21AQ8NDW8 1320 aa18.07■□□□□ 0.48
SEC13-209ENST00000397117 EXOC5O00471 708 aa18.07■□□□□ 0.48
SEC13-209ENST00000397117 PTGER2P43116 358 aa18.07■□□□□ 0.48
SEC13-209ENST00000397117 NFAT5O94916 1531 aa18.07■□□□□ 0.48
SEC13-209ENST00000397117 TXNRD1Q16881 649 aa18.06■□□□□ 0.48
SEC13-209ENST00000397117 ZBTB7AO95365 584 aa18.05■□□□□ 0.48
SEC13-209ENST00000397117 CSB-PGBD3P0DP91 1061 aa18.05■□□□□ 0.48
SEC13-209ENST00000397117 MYOM1P52179 1685 aa18.05■□□□□ 0.48
SEC13-209ENST00000397117 SOX12O15370 315 aa18.05■□□□□ 0.48
SEC13-209ENST00000397117 SLC15A2Q16348 729 aa18.04■□□□□ 0.48
SEC13-209ENST00000397117 SLC12A5Q9H2X9 1139 aa18.04■□□□□ 0.48
SEC13-209ENST00000397117 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
SEC13-209ENST00000397117 ABCC6O95255 1503 aa18.03■□□□□ 0.48
SEC13-209ENST00000397117 ATF5Q9Y2D1 282 aaPredicted RBP18.03■□□□□ 0.48
SEC13-209ENST00000397117 KNSTRNQ9Y448 316 aa18.03■□□□□ 0.48
SEC13-209ENST00000397117 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.48
SEC13-209ENST00000397117 MON2Q7Z3U7 1717 aa18.02■□□□□ 0.48
SEC13-209ENST00000397117 TNS2Q63HR2 1409 aa18.01■□□□□ 0.47
SEC13-209ENST00000397117 NHSQ6T4R5 1651 aa18.01■□□□□ 0.47
SEC13-209ENST00000397117 KAT6BQ8WYB5 2073 aa18■□□□□ 0.47
SEC13-209ENST00000397117 USP54Q70EL1 1684 aa18■□□□□ 0.47
SEC13-209ENST00000397117 USP31Q70CQ4 1352 aa18■□□□□ 0.47
SEC13-209ENST00000397117 PER1O15534 1290 aaPredicted RBP18■□□□□ 0.47
SEC13-209ENST00000397117 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
SEC13-209ENST00000397117 TERF2IPQ9NYB0 399 aa18■□□□□ 0.47
SEC13-209ENST00000397117 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
SEC13-209ENST00000397117 SYT17Q9BSW7 474 aa17.99■□□□□ 0.47
SEC13-209ENST00000397117 ANKRD36BQ8N2N9 1353 aa17.99■□□□□ 0.47
SEC13-209ENST00000397117 MTFR1LQ9H019 292 aa17.98■□□□□ 0.47
SEC13-209ENST00000397117 HDGFL2Q7Z4V5 671 aaPredicted RBP17.98■□□□□ 0.47
SEC13-209ENST00000397117 FHDC1Q9C0D6 1143 aaPredicted RBP17.98■□□□□ 0.47
SEC13-209ENST00000397117 PRKRIP1Q9H875 184 aaPredicted RBP17.98■□□□□ 0.47
SEC13-209ENST00000397117 LTN1O94822 1766 aa17.97■□□□□ 0.47
SEC13-209ENST00000397117 CHD4Q14839 1912 aa17.97■□□□□ 0.47
SEC13-209ENST00000397117 PAPPAQ13219 1627 aa17.96■□□□□ 0.47
SEC13-209ENST00000397117 BTAF1O14981 1849 aa17.96■□□□□ 0.47
SEC13-209ENST00000397117 ERBB3P21860 1342 aa17.96■□□□□ 0.47
SEC13-209ENST00000397117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.96■□□□□ 0.47
SEC13-209ENST00000397117 ACSBG1Q96GR2 724 aa17.96■□□□□ 0.47
SEC13-209ENST00000397117 CD163L1Q9NR16 1453 aa17.96■□□□□ 0.47
SEC13-209ENST00000397117 NME9Q86XW9 330 aa17.95■□□□□ 0.46
SEC13-209ENST00000397117 CARD14Q9BXL6 1004 aa17.95■□□□□ 0.46
SEC13-209ENST00000397117 NLRP2Q9NX02 1062 aa17.95■□□□□ 0.46
SEC13-209ENST00000397117 IL2RBP14784 551 aa17.94■□□□□ 0.46
SEC13-209ENST00000397117 ZNF784Q8NCA9 323 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms