RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 MAP3K19Q56UN5 1328 aa22.3■■□□□ 1.16
SCNN1A-205ENST00000396966 FLT4P35916 1363 aa22.29■■□□□ 1.16
SCNN1A-205ENST00000396966 EIF4A2Q14240 407 aaKnown RBP22.29■■□□□ 1.16
SCNN1A-205ENST00000396966 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.29■■□□□ 1.16
SCNN1A-205ENST00000396966 DLG5Q8TDM6 1919 aa22.29■■□□□ 1.16
SCNN1A-205ENST00000396966 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
SCNN1A-205ENST00000396966 TRIM35Q9UPQ4 493 aa22.28■■□□□ 1.16
SCNN1A-205ENST00000396966 TMEM94Q12767 1356 aa22.28■■□□□ 1.16
SCNN1A-205ENST00000396966 PLIN1O60240 522 aa22.28■■□□□ 1.16
SCNN1A-205ENST00000396966 LTN1O94822 1766 aa22.27■■□□□ 1.16
SCNN1A-205ENST00000396966 DCCP43146 1447 aa22.27■■□□□ 1.16
SCNN1A-205ENST00000396966 HSP90AB2PQ58FF8 381 aa22.27■■□□□ 1.16
SCNN1A-205ENST00000396966 NUTM2GQ5VZR2 741 aa22.27■■□□□ 1.16
SCNN1A-205ENST00000396966 ORAI2Q96SN7 254 aa22.27■■□□□ 1.16
SCNN1A-205ENST00000396966 KIF24Q5T7B8 1368 aa22.27■■□□□ 1.16
SCNN1A-205ENST00000396966 C1orf167Q5SNV9 1468 aa22.27■■□□□ 1.15
SCNN1A-205ENST00000396966 AMPHP49418 695 aa22.26■■□□□ 1.15
SCNN1A-205ENST00000396966 ATF3P18847 181 aa22.26■■□□□ 1.15
SCNN1A-205ENST00000396966 NFE2L2Q16236 605 aa22.26■■□□□ 1.15
SCNN1A-205ENST00000396966 IL16Q14005 1332 aa22.26■■□□□ 1.15
SCNN1A-205ENST00000396966 PHACTR3Q96KR7 559 aa22.24■■□□□ 1.15
SCNN1A-205ENST00000396966 XIRP1Q702N8 1843 aaKnown RBP22.23■■□□□ 1.15
SCNN1A-205ENST00000396966 TRPM3Q9HCF6 1732 aaPredicted RBP22.23■■□□□ 1.15
SCNN1A-205ENST00000396966 FOXO3O43524 673 aa22.23■■□□□ 1.15
SCNN1A-205ENST00000396966 SULT6B1Q6IMI4 303 aa22.22■■□□□ 1.15
SCNN1A-205ENST00000396966 MST1RQ04912 1400 aa22.21■■□□□ 1.15
SCNN1A-205ENST00000396966 ERICH6Q7L0X2 663 aa22.21■■□□□ 1.15
SCNN1A-205ENST00000396966 ARHGEF10O15013 1369 aa22.21■■□□□ 1.15
SCNN1A-205ENST00000396966 LMOD3Q0VAK6 560 aa22.2■■□□□ 1.15
SCNN1A-205ENST00000396966 CALD1Q05682 793 aaKnown RBP22.2■■□□□ 1.14
SCNN1A-205ENST00000396966 KCNH5Q8NCM2 988 aa22.2■■□□□ 1.14
SCNN1A-205ENST00000396966 MSH6P52701 1360 aa22.2■■□□□ 1.14
SCNN1A-205ENST00000396966 CADPS2Q86UW7 1296 aa22.19■■□□□ 1.14
SCNN1A-205ENST00000396966 RTL1A6NKG5 1358 aa22.19■■□□□ 1.14
SCNN1A-205ENST00000396966 HOXC9P31274 260 aa22.18■■□□□ 1.14
SCNN1A-205ENST00000396966 CRBNQ96SW2 442 aa22.18■■□□□ 1.14
SCNN1A-205ENST00000396966 NFAT5O94916 1531 aa22.18■■□□□ 1.14
SCNN1A-205ENST00000396966 CT47B1P0C2W7 299 aaPredicted RBP22.18■■□□□ 1.14
SCNN1A-205ENST00000396966 KRT28Q7Z3Y7 464 aa22.18■■□□□ 1.14
SCNN1A-205ENST00000396966 BCAR3O75815 825 aa22.17■■□□□ 1.14
SCNN1A-205ENST00000396966 AEBP1Q8IUX7 1158 aa22.17■■□□□ 1.14
SCNN1A-205ENST00000396966 PHRF1Q9P1Y6 1649 aaKnown RBP22.17■■□□□ 1.14
SCNN1A-205ENST00000396966 C20orf194Q5TEA3 1177 aa22.17■■□□□ 1.14
SCNN1A-205ENST00000396966 XPCQ01831 940 aaPredicted RBP22.16■■□□□ 1.14
SCNN1A-205ENST00000396966 TSR2Q969E8 191 aaKnown RBP22.15■■□□□ 1.14
SCNN1A-205ENST00000396966 ALS2Q96Q42 1657 aa22.15■■□□□ 1.14
SCNN1A-205ENST00000396966 SLIT3O75094 1523 aa22.14■■□□□ 1.14
SCNN1A-205ENST00000396966 RARSP54136 660 aaKnown RBP22.14■■□□□ 1.13
SCNN1A-205ENST00000396966 IGSF1Q8N6C5 1336 aa22.14■■□□□ 1.13
SCNN1A-205ENST00000396966 KDRP35968 1356 aa22.13■■□□□ 1.13
SCNN1A-205ENST00000396966 LMOD2Q6P5Q4 547 aa22.13■■□□□ 1.13
SCNN1A-205ENST00000396966 CANXP27824 592 aaKnown RBP22.12■■□□□ 1.13
SCNN1A-205ENST00000396966 EXOSC9Q06265 439 aaKnown RBP22.12■■□□□ 1.13
SCNN1A-205ENST00000396966 EYA1Q99502 592 aa22.12■■□□□ 1.13
SCNN1A-205ENST00000396966 IP6K1Q92551 441 aa22.11■■□□□ 1.13
SCNN1A-205ENST00000396966 GNAI1P63096 354 aa22.11■■□□□ 1.13
SCNN1A-205ENST00000396966 LAS1LQ9Y4W2 734 aaKnown RBP22.1■■□□□ 1.13
SCNN1A-205ENST00000396966 IFT57Q9NWB7 429 aa22.09■■□□□ 1.13
SCNN1A-205ENST00000396966 GCP02774 474 aa22.09■■□□□ 1.13
SCNN1A-205ENST00000396966 USP19O94966 1318 aa22.08■■□□□ 1.13
SCNN1A-205ENST00000396966 NPHP3Q7Z494 1330 aa22.08■■□□□ 1.13
SCNN1A-205ENST00000396966 PDE3AQ14432 1141 aa22.08■■□□□ 1.13
SCNN1A-205ENST00000396966 ZNF335Q9H4Z2 1342 aaPredicted RBP22.08■■□□□ 1.12
SCNN1A-205ENST00000396966 LTV1Q96GA3 475 aaPredicted RBP22.07■■□□□ 1.12
SCNN1A-205ENST00000396966 THUMPD2Q9BTF0 503 aaKnown RBP22.07■■□□□ 1.12
SCNN1A-205ENST00000396966 ZBTB7CA1YPR0 619 aa22.06■■□□□ 1.12
SCNN1A-205ENST00000396966 FRAT1Q92837 279 aaPredicted RBP22.06■■□□□ 1.12
SCNN1A-205ENST00000396966 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
SCNN1A-205ENST00000396966 RGPD2P0DJD1 1756 aa22.05■■□□□ 1.12
SCNN1A-205ENST00000396966 CFAP44Q96MT7 982 aa22.05■■□□□ 1.12
SCNN1A-205ENST00000396966 FAM83GA6ND36 823 aa22.05■■□□□ 1.12
SCNN1A-205ENST00000396966 ZNF853P0CG23 659 aa22.05■■□□□ 1.12
SCNN1A-205ENST00000396966 ANP32AP39687 249 aaKnown RBP22.04■■□□□ 1.12
SCNN1A-205ENST00000396966 ARHGEF25Q86VW2 580 aa22.04■■□□□ 1.12
SCNN1A-205ENST00000396966 GAS2L2Q8NHY3 880 aa22.04■■□□□ 1.12
SCNN1A-205ENST00000396966 BCL2L13Q9BXK5 485 aa22.03■■□□□ 1.12
SCNN1A-205ENST00000396966 PLEKHG5O94827 1062 aa22.02■■□□□ 1.12
SCNN1A-205ENST00000396966 DCTN1Q14203 1278 aa22.02■■□□□ 1.12
SCNN1A-205ENST00000396966 MTHFSDQ2M296 383 aaKnown RBP22.02■■□□□ 1.12
SCNN1A-205ENST00000396966 NOP58Q9Y2X3 529 aaKnown RBP22.02■■□□□ 1.12
SCNN1A-205ENST00000396966 RGPD5Q99666 1765 aa22.02■■□□□ 1.12
SCNN1A-205ENST00000396966 MED1Q15648 1581 aaPredicted RBP22.02■■□□□ 1.12
SCNN1A-205ENST00000396966 ZNF428Q96B54 188 aa22.02■■□□□ 1.12
SCNN1A-205ENST00000396966 SMC4Q9NTJ3 1288 aa22.02■■□□□ 1.12
SCNN1A-205ENST00000396966 SKAP1Q86WV1 359 aa22.01■■□□□ 1.11
SCNN1A-205ENST00000396966 RTF1Q92541 710 aaKnown RBP22.01■■□□□ 1.11
SCNN1A-205ENST00000396966 DDX17Q92841 729 aaKnown RBP22.01■■□□□ 1.11
SCNN1A-205ENST00000396966 MBIPQ9NS73 344 aa22.01■■□□□ 1.11
SCNN1A-205ENST00000396966 TNS3Q68CZ2 1445 aa22.01■■□□□ 1.11
SCNN1A-205ENST00000396966 PXDNQ92626 1479 aa22.01■■□□□ 1.11
SCNN1A-205ENST00000396966 ALDH1L2Q3SY69 923 aa22■■□□□ 1.11
SCNN1A-205ENST00000396966 MS4A1P11836 297 aa21.99■■□□□ 1.11
SCNN1A-205ENST00000396966 PDE4AP27815 886 aa21.99■■□□□ 1.11
SCNN1A-205ENST00000396966 ZKSCAN2Q63HK3 967 aa21.99■■□□□ 1.11
SCNN1A-205ENST00000396966 MCM10Q7L590 875 aa21.98■■□□□ 1.11
SCNN1A-205ENST00000396966 SSH1Q8WYL5 1049 aa21.98■■□□□ 1.11
SCNN1A-205ENST00000396966 IPO9Q96P70 1041 aaKnown RBP21.98■■□□□ 1.11
SCNN1A-205ENST00000396966 BRINP3Q76B58 766 aa21.98■■□□□ 1.11
SCNN1A-205ENST00000396966 HTATSF1O43719 755 aaKnown RBP21.97■■□□□ 1.11
SCNN1A-205ENST00000396966 PANK1Q8TE04 598 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms