RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 NUP188Q5SRE5 1749 aa31.47■■■□□ 2.63
PARD6B-202ENST00000396039 R3HDM1Q15032 1099 aaKnown RBP31.47■■■□□ 2.63
PARD6B-202ENST00000396039 RGPD3A6NKT7 1758 aaPredicted RBP31.47■■■□□ 2.63
PARD6B-202ENST00000396039 RGPD4Q7Z3J3 1758 aa31.47■■■□□ 2.63
PARD6B-202ENST00000396039 TOM1L2Q6ZVM7 507 aa31.46■■■□□ 2.63
PARD6B-202ENST00000396039 KTN1Q86UP2 1357 aaKnown RBP31.45■■■□□ 2.63
PARD6B-202ENST00000396039 CDCA7Q9BWT1 371 aaPredicted RBP31.45■■■□□ 2.63
PARD6B-202ENST00000396039 PEAK1Q9H792 1746 aa31.45■■■□□ 2.63
PARD6B-202ENST00000396039 RGPD5Q99666 1765 aa31.45■■■□□ 2.62
PARD6B-202ENST00000396039 WDR17Q8IZU2 1322 aa31.45■■■□□ 2.62
PARD6B-202ENST00000396039 SBF2Q86WG5 1849 aa31.45■■■□□ 2.62
PARD6B-202ENST00000396039 USP54Q70EL1 1684 aa31.44■■■□□ 2.62
PARD6B-202ENST00000396039 DDB1Q16531 1140 aa31.42■■■□□ 2.62
PARD6B-202ENST00000396039 ARHGEF25Q86VW2 580 aa31.42■■■□□ 2.62
PARD6B-202ENST00000396039 NBPF14Q5TI25 921 aa31.41■■■□□ 2.62
PARD6B-202ENST00000396039 CARD11Q9BXL7 1154 aa31.41■■■□□ 2.62
PARD6B-202ENST00000396039 NFAT5O94916 1531 aa31.4■■■□□ 2.62
PARD6B-202ENST00000396039 TONSLQ96HA7 1378 aa31.39■■■□□ 2.62
PARD6B-202ENST00000396039 AXIN2Q9Y2T1 843 aa31.36■■■□□ 2.61
PARD6B-202ENST00000396039 CSB-PGBD3P0DP91 1061 aa31.35■■■□□ 2.61
PARD6B-202ENST00000396039 CARD10Q9BWT7 1032 aa31.35■■■□□ 2.61
PARD6B-202ENST00000396039 BCL9O00512 1426 aa31.34■■■□□ 2.61
PARD6B-202ENST00000396039 CCDC7Q96M83 1385 aa31.34■■■□□ 2.61
PARD6B-202ENST00000396039 USP31Q70CQ4 1352 aa31.33■■■□□ 2.61
PARD6B-202ENST00000396039 LTN1O94822 1766 aa31.33■■■□□ 2.61
PARD6B-202ENST00000396039 SOX12O15370 315 aa31.32■■■□□ 2.6
PARD6B-202ENST00000396039 HDGFL2Q7Z4V5 671 aaPredicted RBP31.32■■■□□ 2.6
PARD6B-202ENST00000396039 PLSCR1O15162 318 aa31.3■■■□□ 2.6
PARD6B-202ENST00000396039 PUS7Q96PZ0 661 aaKnown RBP31.3■■■□□ 2.6
PARD6B-202ENST00000396039 CD163L1Q9NR16 1453 aa31.29■■■□□ 2.6
PARD6B-202ENST00000396039 EDC4Q6P2E9 1401 aaKnown RBP31.29■■■□□ 2.6
PARD6B-202ENST00000396039 BCL11BQ9C0K0 894 aaPredicted RBP31.28■■■□□ 2.6
PARD6B-202ENST00000396039 SLC24A1O60721 1099 aa31.27■■■□□ 2.6
PARD6B-202ENST00000396039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.27■■■□□ 2.6
PARD6B-202ENST00000396039 TMC1Q8TDI8 760 aa31.27■■■□□ 2.6
PARD6B-202ENST00000396039 TERF2IPQ9NYB0 399 aa31.27■■■□□ 2.6
PARD6B-202ENST00000396039 NINLQ9Y2I6 1382 aa31.25■■■□□ 2.59
PARD6B-202ENST00000396039 TNS2Q63HR2 1409 aa31.24■■■□□ 2.59
PARD6B-202ENST00000396039 EXOC5O00471 708 aa31.24■■■□□ 2.59
PARD6B-202ENST00000396039 MARCH10Q8NA82 808 aaPredicted RBP31.22■■■□□ 2.59
PARD6B-202ENST00000396039 ERBB3P21860 1342 aa31.21■■■□□ 2.59
PARD6B-202ENST00000396039 NME9Q86XW9 330 aa31.2■■■□□ 2.59
PARD6B-202ENST00000396039 FAM208AQ9UK61 1670 aaKnown RBP31.19■■■□□ 2.58
PARD6B-202ENST00000396039 A0A1W2PP64 1363 aa31.19■■■□□ 2.58
PARD6B-202ENST00000396039 SLC12A5Q9H2X9 1139 aa31.18■■■□□ 2.58
PARD6B-202ENST00000396039 NHSQ6T4R5 1651 aa31.17■■■□□ 2.58
PARD6B-202ENST00000396039 SPON1Q9HCB6 807 aa31.17■■■□□ 2.58
PARD6B-202ENST00000396039 NLRP2Q9NX02 1062 aa31.14■■■□□ 2.58
PARD6B-202ENST00000396039 KCNQ2O43526 872 aa31.13■■■□□ 2.57
PARD6B-202ENST00000396039 CASZ1Q86V15 1759 aa31.12■■■□□ 2.57
PARD6B-202ENST00000396039 IL2RBP14784 551 aa31.11■■■□□ 2.57
PARD6B-202ENST00000396039 PPP1R1BQ9UD71 204 aaPredicted RBP31.11■■■□□ 2.57
PARD6B-202ENST00000396039 ANKRD24Q8TF21 1146 aa31.1■■■□□ 2.57
PARD6B-202ENST00000396039 TESK2Q96S53 571 aa31.08■■■□□ 2.57
PARD6B-202ENST00000396039 KAT6BQ8WYB5 2073 aa31.08■■■□□ 2.57
PARD6B-202ENST00000396039 ST20-MTHFSA0A0A6YYL1 179 aa31.07■■■□□ 2.56
PARD6B-202ENST00000396039 PTF1AQ7RTS3 328 aa31.06■■■□□ 2.56
PARD6B-202ENST00000396039 ANO8Q9HCE9 1232 aaPredicted RBP31.06■■■□□ 2.56
PARD6B-202ENST00000396039 TXNRD1Q16881 649 aa31.05■■■□□ 2.56
PARD6B-202ENST00000396039 COG3Q96JB2 828 aa31.05■■■□□ 2.56
PARD6B-202ENST00000396039 IP6K1Q92551 441 aa31.04■■■□□ 2.56
PARD6B-202ENST00000396039 STK32BQ9NY57 414 aa31.04■■■□□ 2.56
PARD6B-202ENST00000396039 BTAF1O14981 1849 aa31.03■■■□□ 2.56
PARD6B-202ENST00000396039 PROM2Q8N271 834 aa31.03■■■□□ 2.56
PARD6B-202ENST00000396039 ANKRD36BQ8N2N9 1353 aa31.03■■■□□ 2.56
PARD6B-202ENST00000396039 DCAF8L1A6NGE4 600 aa31.02■■■□□ 2.56
PARD6B-202ENST00000396039 TRIM26Q12899 539 aaPredicted RBP31.01■■■□□ 2.55
PARD6B-202ENST00000396039 TMF1P82094 1093 aa30.98■■■□□ 2.55
PARD6B-202ENST00000396039 SLC15A2Q16348 729 aa30.97■■■□□ 2.55
PARD6B-202ENST00000396039 RTL1A6NKG5 1358 aa30.96■■■□□ 2.55
PARD6B-202ENST00000396039 USP47Q96K76 1375 aa30.95■■■□□ 2.55
PARD6B-202ENST00000396039 ACSBG1Q96GR2 724 aa30.95■■■□□ 2.55
PARD6B-202ENST00000396039 CDCA8Q53HL2 280 aa30.94■■■□□ 2.54
PARD6B-202ENST00000396039 PAPPAQ13219 1627 aa30.94■■■□□ 2.54
PARD6B-202ENST00000396039 KIF20BQ96Q89 1820 aa30.94■■■□□ 2.54
PARD6B-202ENST00000396039 AMPHP49418 695 aa30.93■■■□□ 2.54
PARD6B-202ENST00000396039 MAP3K19Q56UN5 1328 aa30.93■■■□□ 2.54
PARD6B-202ENST00000396039 HOXC9P31274 260 aa30.92■■■□□ 2.54
PARD6B-202ENST00000396039 MYOM1P52179 1685 aa30.91■■■□□ 2.54
PARD6B-202ENST00000396039 RGPD2P0DJD1 1756 aa30.9■■■□□ 2.54
PARD6B-202ENST00000396039 LTV1Q96GA3 475 aaPredicted RBP30.9■■■□□ 2.54
PARD6B-202ENST00000396039 ZBTB7AO95365 584 aa30.89■■■□□ 2.54
PARD6B-202ENST00000396039 SMG6Q86US8 1419 aaKnown RBP30.89■■■□□ 2.53
PARD6B-202ENST00000396039 MTFR1LQ9H019 292 aa30.88■■■□□ 2.53
PARD6B-202ENST00000396039 QSER1Q2KHR3 1735 aa30.87■■■□□ 2.53
PARD6B-202ENST00000396039 DOT1LQ8TEK3 1739 aa30.87■■■□□ 2.53
PARD6B-202ENST00000396039 SHANK3Q9BYB0 1731 aa30.86■■■□□ 2.53
PARD6B-202ENST00000396039 DDX54Q8TDD1 881 aaKnown RBP30.85■■■□□ 2.53
PARD6B-202ENST00000396039 PDGFDQ9GZP0 370 aaPredicted RBP30.85■■■□□ 2.53
PARD6B-202ENST00000396039 CGNL1Q0VF96 1302 aa30.84■■■□□ 2.53
PARD6B-202ENST00000396039 SLC27A3Q5K4L6 730 aa30.84■■■□□ 2.53
PARD6B-202ENST00000396039 YY1P25490 414 aa30.83■■■□□ 2.53
PARD6B-202ENST00000396039 PTGER2P43116 358 aa30.83■■■□□ 2.53
PARD6B-202ENST00000396039 TIMELESSQ9UNS1 1208 aa30.83■■■□□ 2.53
PARD6B-202ENST00000396039 KIF24Q5T7B8 1368 aa30.82■■■□□ 2.52
PARD6B-202ENST00000396039 FYB1O15117 783 aa30.82■■■□□ 2.52
PARD6B-202ENST00000396039 ZCRB1Q8TBF4 217 aaKnown RBP30.81■■■□□ 2.52
PARD6B-202ENST00000396039 ATF5Q9Y2D1 282 aaPredicted RBP30.81■■■□□ 2.52
PARD6B-202ENST00000396039 LY75O60449 1722 aa30.81■■■□□ 2.52
PARD6B-202ENST00000396039 GGNBP2Q9H3C7 697 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms