RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SLFNL1Q499Z3 407 aa8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 FOXD4L5Q5VV16 416 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 FOXD4L4Q8WXT5 416 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 MTRQ99707 1265 aa8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 ARHGAP9Q9BRR9 750 aa8.74□□□□□ -1.01
HMGB1P10-201ENST00000395823 TRAF7Q6Q0C0 670 aa8.73□□□□□ -1.01
HMGB1P10-201ENST00000395823 GNEQ9Y223 722 aaKnown RBP8.73□□□□□ -1.01
HMGB1P10-201ENST00000395823 MCCD1P59942 119 aaPredicted RBP8.72□□□□□ -1.01
HMGB1P10-201ENST00000395823 SND1Q7KZF4 910 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB1P10-201ENST00000395823 SH3RF1Q7Z6J0 888 aa8.72□□□□□ -1.01
HMGB1P10-201ENST00000395823 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
HMGB1P10-201ENST00000395823 KCTD12Q96CX2 325 aaKnown RBP8.72□□□□□ -1.01
HMGB1P10-201ENST00000395823 TJAP1Q5JTD0 557 aa8.71□□□□□ -1.02
HMGB1P10-201ENST00000395823 CCDC24Q8N4L8 307 aa8.71□□□□□ -1.02
HMGB1P10-201ENST00000395823 CCDC85AQ96PX6 553 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P10-201ENST00000395823 RASA1P20936 1047 aa8.7□□□□□ -1.02
HMGB1P10-201ENST00000395823 CLDN10P78369 228 aa8.7□□□□□ -1.02
HMGB1P10-201ENST00000395823 TXNDC2Q86VQ3 553 aa8.7□□□□□ -1.02
HMGB1P10-201ENST00000395823 ZNF592Q92610 1267 aa8.7□□□□□ -1.02
HMGB1P10-201ENST00000395823 ATP5J2-PTCD1G3V325 749 aa8.69□□□□□ -1.02
HMGB1P10-201ENST00000395823 SSFA2P28290 1259 aa8.69□□□□□ -1.02
HMGB1P10-201ENST00000395823 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
HMGB1P10-201ENST00000395823 NYAP1Q6ZVC0 841 aa8.69□□□□□ -1.02
HMGB1P10-201ENST00000395823 ANKMY2Q8IV38 441 aa8.69□□□□□ -1.02
HMGB1P10-201ENST00000395823 ZNF428Q96B54 188 aa8.69□□□□□ -1.02
HMGB1P10-201ENST00000395823 CARD14Q9BXL6 1004 aa8.69□□□□□ -1.02
HMGB1P10-201ENST00000395823 SLC6A16Q9GZN6 736 aa8.69□□□□□ -1.02
HMGB1P10-201ENST00000395823 MYT1LQ9UL68 1186 aa8.69□□□□□ -1.02
HMGB1P10-201ENST00000395823 LZTS3O60299 673 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P10-201ENST00000395823 DKK1O94907 266 aa8.68□□□□□ -1.02
HMGB1P10-201ENST00000395823 MAP7D1Q3KQU3 841 aa8.68□□□□□ -1.02
HMGB1P10-201ENST00000395823 B4GALNT3Q6L9W6 998 aa8.68□□□□□ -1.02
HMGB1P10-201ENST00000395823 LARP1Q6PKG0 1096 aaKnown RBP8.68□□□□□ -1.02
HMGB1P10-201ENST00000395823 ZBTB33Q86T24 672 aa8.68□□□□□ -1.02
HMGB1P10-201ENST00000395823 OGFOD1Q8N543 542 aa8.68□□□□□ -1.02
HMGB1P10-201ENST00000395823 FOXJ1Q92949 421 aa8.68□□□□□ -1.02
HMGB1P10-201ENST00000395823 CLP1Q92989 425 aaKnown RBP8.68□□□□□ -1.02
HMGB1P10-201ENST00000395823 MAGEB6P1A0A0J9YX57 407 aa8.67□□□□□ -1.02
HMGB1P10-201ENST00000395823 DPYDQ12882 1025 aa8.67□□□□□ -1.02
HMGB1P10-201ENST00000395823 EML3Q32P44 896 aa8.67□□□□□ -1.02
HMGB1P10-201ENST00000395823 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
HMGB1P10-201ENST00000395823 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
HMGB1P10-201ENST00000395823 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
HMGB1P10-201ENST00000395823 NKX2-3Q8TAU0 364 aa8.67□□□□□ -1.02
HMGB1P10-201ENST00000395823 BAP1Q92560 729 aa8.67□□□□□ -1.02
HMGB1P10-201ENST00000395823 KIAA1024Q9UPX6 916 aa8.67□□□□□ -1.02
HMGB1P10-201ENST00000395823 GIGYF1O75420 1035 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P10-201ENST00000395823 CCDC27Q2M243 656 aa8.66□□□□□ -1.02
HMGB1P10-201ENST00000395823 FAM200AQ8TCP9 573 aa8.66□□□□□ -1.02
HMGB1P10-201ENST00000395823 ZNF594Q96JF6 807 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P10-201ENST00000395823 CDCA7Q9BWT1 371 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P10-201ENST00000395823 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
HMGB1P10-201ENST00000395823 ZBTB7BO15156 539 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P10-201ENST00000395823 S1PR4O95977 384 aa8.65□□□□□ -1.02
HMGB1P10-201ENST00000395823 ZNF511Q8NB15 262 aa8.65□□□□□ -1.02
HMGB1P10-201ENST00000395823 C1QTNF2Q9BXJ5 285 aa8.65□□□□□ -1.02
HMGB1P10-201ENST00000395823 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.02
HMGB1P10-201ENST00000395823 DNAAF2Q9NVR5 837 aaKnown RBP8.64□□□□□ -1.03
HMGB1P10-201ENST00000395823 FCF1Q9Y324 198 aaKnown RBP8.64□□□□□ -1.03
HMGB1P10-201ENST00000395823 ESPNB1AK53 854 aa8.63□□□□□ -1.03
HMGB1P10-201ENST00000395823 SCNN1AP37088 669 aa8.63□□□□□ -1.03
HMGB1P10-201ENST00000395823 BPHLQ86WA6 291 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P10-201ENST00000395823 TRIM50Q86XT4 487 aa8.63□□□□□ -1.03
HMGB1P10-201ENST00000395823 SIX5Q8N196 739 aa8.63□□□□□ -1.03
HMGB1P10-201ENST00000395823 NOD1Q9Y239 953 aa8.63□□□□□ -1.03
HMGB1P10-201ENST00000395823 ATP2B4P23634 1241 aa8.62□□□□□ -1.03
HMGB1P10-201ENST00000395823 PTPN5P54829 565 aa8.62□□□□□ -1.03
HMGB1P10-201ENST00000395823 OXLD1Q5BKU9 147 aa8.62□□□□□ -1.03
HMGB1P10-201ENST00000395823 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
HMGB1P10-201ENST00000395823 GTF2IP78347 998 aa8.61□□□□□ -1.03
HMGB1P10-201ENST00000395823 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
HMGB1P10-201ENST00000395823 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
HMGB1P10-201ENST00000395823 PCDHGA11Q9Y5H2 935 aa8.61□□□□□ -1.03
HMGB1P10-201ENST00000395823 ARID4AP29374 1257 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P10-201ENST00000395823 SERPINB4P48594 390 aa8.6□□□□□ -1.03
HMGB1P10-201ENST00000395823 RBM25P49756 843 aaKnown RBP8.6□□□□□ -1.03
HMGB1P10-201ENST00000395823 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
HMGB1P10-201ENST00000395823 SH3BP2P78314 561 aa8.6□□□□□ -1.03
HMGB1P10-201ENST00000395823 SLC10A4Q96EP9 437 aa8.6□□□□□ -1.03
HMGB1P10-201ENST00000395823 AGERQ15109 404 aa8.59□□□□□ -1.03
HMGB1P10-201ENST00000395823 OCLNQ16625 522 aa8.59□□□□□ -1.03
HMGB1P10-201ENST00000395823 TRMT44Q8IYL2 757 aaKnown RBP8.59□□□□□ -1.03
HMGB1P10-201ENST00000395823 TPCN2Q8NHX9 752 aa8.58□□□□□ -1.04
HMGB1P10-201ENST00000395823 PCDHB11Q9Y5F2 797 aa8.58□□□□□ -1.04
HMGB1P10-201ENST00000395823 SOWAHDA6NJG2 315 aa8.57□□□□□ -1.04
HMGB1P10-201ENST00000395823 SFI1A8K8P3 1242 aa8.57□□□□□ -1.04
HMGB1P10-201ENST00000395823 PPEF1O14829 653 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P10-201ENST00000395823 PRMT3O60678 531 aa8.57□□□□□ -1.04
HMGB1P10-201ENST00000395823 CCDC102BQ68D86 513 aa8.57□□□□□ -1.04
HMGB1P10-201ENST00000395823 C1orf216Q8TAB5 229 aa8.57□□□□□ -1.04
HMGB1P10-201ENST00000395823 PCDH10Q9P2E7 1040 aa8.57□□□□□ -1.04
HMGB1P10-201ENST00000395823 SEC13P55735 322 aa8.56□□□□□ -1.04
HMGB1P10-201ENST00000395823 NBPF20Q3BBV1 942 aa8.56□□□□□ -1.04
HMGB1P10-201ENST00000395823 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
HMGB1P10-201ENST00000395823 PLA2G2CQ5R387 149 aa8.56□□□□□ -1.04
HMGB1P10-201ENST00000395823 RNF20Q5VTR2 975 aa8.56□□□□□ -1.04
HMGB1P10-201ENST00000395823 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
HMGB1P10-201ENST00000395823 LGR5O75473 907 aa8.55□□□□□ -1.04
HMGB1P10-201ENST00000395823 DNAJC14Q6Y2X3 702 aaPredicted RBP8.55□□□□□ -1.04
HMGB1P10-201ENST00000395823 TAS1R3Q7RTX0 852 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms