RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CHRNA2Q15822 529 aa19.97■□□□□ 0.79
SMARCD1-202ENST00000394963 GLI2P10070 1586 aa19.97■□□□□ 0.79
SMARCD1-202ENST00000394963 MPRIPQ6WCQ1 1025 aa19.96■□□□□ 0.79
SMARCD1-202ENST00000394963 CCDC9Q9Y3X0 531 aaKnown RBP19.96■□□□□ 0.79
SMARCD1-202ENST00000394963 CAMSAP1Q5T5Y3 1602 aa19.96■□□□□ 0.79
SMARCD1-202ENST00000394963 ARHGAP31Q2M1Z3 1444 aa19.94■□□□□ 0.78
SMARCD1-202ENST00000394963 MTHFSDQ2M296 383 aaKnown RBP19.94■□□□□ 0.78
SMARCD1-202ENST00000394963 C1orf141Q5JVX7 400 aa19.94■□□□□ 0.78
SMARCD1-202ENST00000394963 EYA1Q99502 592 aa19.94■□□□□ 0.78
SMARCD1-202ENST00000394963 PLEKHF1Q96S99 279 aa19.93■□□□□ 0.78
SMARCD1-202ENST00000394963 PUS7Q96PZ0 661 aaKnown RBP19.92■□□□□ 0.78
SMARCD1-202ENST00000394963 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
SMARCD1-202ENST00000394963 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
SMARCD1-202ENST00000394963 ZNF530Q6P9A1 599 aaPredicted RBP19.92■□□□□ 0.78
SMARCD1-202ENST00000394963 BECN1Q14457 450 aa19.92■□□□□ 0.78
SMARCD1-202ENST00000394963 VWDEQ8N2E2 1590 aa19.91■□□□□ 0.78
SMARCD1-202ENST00000394963 STRN4Q9NRL3 753 aa19.91■□□□□ 0.78
SMARCD1-202ENST00000394963 NINLQ9Y2I6 1382 aa19.91■□□□□ 0.78
SMARCD1-202ENST00000394963 CLTCQ00610 1675 aaKnown RBP19.91■□□□□ 0.78
SMARCD1-202ENST00000394963 LMTK2Q8IWU2 1503 aa19.9■□□□□ 0.78
SMARCD1-202ENST00000394963 SEC24BO95487 1268 aa19.9■□□□□ 0.78
SMARCD1-202ENST00000394963 NOL8Q76FK4 1167 aaKnown RBP19.9■□□□□ 0.78
SMARCD1-202ENST00000394963 NEXMIFQ5QGS0 1516 aa19.9■□□□□ 0.78
SMARCD1-202ENST00000394963 ALKQ9UM73 1620 aa19.9■□□□□ 0.78
SMARCD1-202ENST00000394963 SETD1BQ9UPS6 1966 aaKnown RBP19.9■□□□□ 0.78
SMARCD1-202ENST00000394963 SMARCA5O60264 1052 aaPredicted RBP19.89■□□□□ 0.78
SMARCD1-202ENST00000394963 API5Q9BZZ5 524 aaKnown RBP19.89■□□□□ 0.78
SMARCD1-202ENST00000394963 DEPDC5O75140 1603 aa19.89■□□□□ 0.77
SMARCD1-202ENST00000394963 CFAP44Q96MT7 982 aa19.89■□□□□ 0.77
SMARCD1-202ENST00000394963 VAMP4O75379 141 aa19.89■□□□□ 0.77
SMARCD1-202ENST00000394963 PIK3C2BO00750 1634 aa19.89■□□□□ 0.77
SMARCD1-202ENST00000394963 QRICH2Q9H0J4 1663 aa19.88■□□□□ 0.77
SMARCD1-202ENST00000394963 POLR1AO95602 1720 aaPredicted RBP19.88■□□□□ 0.77
SMARCD1-202ENST00000394963 TRIM6-TRIM34B2RNG4 842 aa19.88■□□□□ 0.77
SMARCD1-202ENST00000394963 KAT6BQ8WYB5 2073 aa19.88■□□□□ 0.77
SMARCD1-202ENST00000394963 TRMT2AQ8IZ69 625 aaKnown RBP19.88■□□□□ 0.77
SMARCD1-202ENST00000394963 HDGFL1Q5TGJ6 251 aa19.87■□□□□ 0.77
SMARCD1-202ENST00000394963 GAS2L2Q8NHY3 880 aa19.87■□□□□ 0.77
SMARCD1-202ENST00000394963 DEKP35659 375 aaKnown RBP19.86■□□□□ 0.77
SMARCD1-202ENST00000394963 CCDC27Q2M243 656 aa19.86■□□□□ 0.77
SMARCD1-202ENST00000394963 RAPGEF4Q8WZA2 1011 aa19.86■□□□□ 0.77
SMARCD1-202ENST00000394963 IFT57Q9NWB7 429 aa19.86■□□□□ 0.77
SMARCD1-202ENST00000394963 ADGRB1O14514 1584 aa19.86■□□□□ 0.77
SMARCD1-202ENST00000394963 PIP4K2AP48426 406 aaPredicted RBP19.86■□□□□ 0.77
SMARCD1-202ENST00000394963 KRT28Q7Z3Y7 464 aa19.86■□□□□ 0.77
SMARCD1-202ENST00000394963 IQGAP1P46940 1657 aa19.86■□□□□ 0.77
SMARCD1-202ENST00000394963 RILPL2Q969X0 211 aa19.85■□□□□ 0.77
SMARCD1-202ENST00000394963 GNAT3A8MTJ3 354 aa19.84■□□□□ 0.77
SMARCD1-202ENST00000394963 DNAJC5Q9H3Z4 198 aa19.84■□□□□ 0.77
SMARCD1-202ENST00000394963 TSHZ3Q63HK5 1081 aa19.84■□□□□ 0.77
SMARCD1-202ENST00000394963 CHMP4BQ9H444 224 aaKnown RBP19.84■□□□□ 0.77
SMARCD1-202ENST00000394963 TAOK2Q9UL54 1235 aa19.84■□□□□ 0.77
SMARCD1-202ENST00000394963 EXOC6BQ9Y2D4 811 aa19.84■□□□□ 0.77
SMARCD1-202ENST00000394963 GZF1Q9H116 711 aaPredicted RBP19.84■□□□□ 0.77
SMARCD1-202ENST00000394963 CHMP3Q9Y3E7 222 aa19.84■□□□□ 0.77
SMARCD1-202ENST00000394963 G2E3Q7L622 706 aa19.83■□□□□ 0.77
SMARCD1-202ENST00000394963 SYTL4Q96C24 671 aaPredicted RBP19.83■□□□□ 0.77
SMARCD1-202ENST00000394963 EDC4Q6P2E9 1401 aaKnown RBP19.83■□□□□ 0.77
SMARCD1-202ENST00000394963 PTPRMP28827 1452 aa19.83■□□□□ 0.77
SMARCD1-202ENST00000394963 DDX54Q8TDD1 881 aaKnown RBP19.83■□□□□ 0.77
SMARCD1-202ENST00000394963 MYL6BP14649 208 aa19.83■□□□□ 0.76
SMARCD1-202ENST00000394963 HSP90AB1P08238 724 aaKnown RBP19.82■□□□□ 0.76
SMARCD1-202ENST00000394963 EVA1CP58658 441 aa19.82■□□□□ 0.76
SMARCD1-202ENST00000394963 RTN4Q9NQC3 1192 aaKnown RBP19.81■□□□□ 0.76
SMARCD1-202ENST00000394963 SIGLEC1Q9BZZ2 1709 aa19.81■□□□□ 0.76
SMARCD1-202ENST00000394963 MEIS3Q99687 375 aa19.81■□□□□ 0.76
SMARCD1-202ENST00000394963 HOXC9P31274 260 aa19.81■□□□□ 0.76
SMARCD1-202ENST00000394963 INSRP06213 1382 aa19.8■□□□□ 0.76
SMARCD1-202ENST00000394963 SLC39A6Q13433 755 aa19.8■□□□□ 0.76
SMARCD1-202ENST00000394963 C8orf34Q49A92 452 aa19.8■□□□□ 0.76
SMARCD1-202ENST00000394963 C16orf71Q8IYS4 520 aaPredicted RBP19.8■□□□□ 0.76
SMARCD1-202ENST00000394963 LGR6Q9HBX8 967 aa19.79■□□□□ 0.76
SMARCD1-202ENST00000394963 PLEKHG3A1L390 1219 aa19.79■□□□□ 0.76
SMARCD1-202ENST00000394963 GCP02774 474 aa19.79■□□□□ 0.76
SMARCD1-202ENST00000394963 MRPL50Q8N5N7 158 aaKnown RBP19.79■□□□□ 0.76
SMARCD1-202ENST00000394963 JARID2Q92833 1246 aaPredicted RBP19.79■□□□□ 0.76
SMARCD1-202ENST00000394963 IL1RAPL2Q9NP60 686 aa19.79■□□□□ 0.76
SMARCD1-202ENST00000394963 KDM2BQ8NHM5 1336 aa19.79■□□□□ 0.76
SMARCD1-202ENST00000394963 FOXD4L5Q5VV16 416 aaPredicted RBP19.79■□□□□ 0.76
SMARCD1-202ENST00000394963 FOXD4L4Q8WXT5 416 aaPredicted RBP19.79■□□□□ 0.76
SMARCD1-202ENST00000394963 BTBD11A6QL63 1104 aa19.78■□□□□ 0.76
SMARCD1-202ENST00000394963 MAP4K4O95819 1239 aaPredicted RBP19.78■□□□□ 0.76
SMARCD1-202ENST00000394963 C9orf78Q9NZ63 289 aaPredicted RBP19.78■□□□□ 0.76
SMARCD1-202ENST00000394963 NRXN1Q9ULB1 1477 aa19.78■□□□□ 0.76
SMARCD1-202ENST00000394963 CHD1LQ86WJ1 897 aa19.78■□□□□ 0.76
SMARCD1-202ENST00000394963 MYO5BQ9ULV0 1848 aa19.78■□□□□ 0.76
SMARCD1-202ENST00000394963 NBPF6Q5VWK0 638 aa19.78■□□□□ 0.76
SMARCD1-202ENST00000394963 NBPF4Q96M43 638 aa19.78■□□□□ 0.76
SMARCD1-202ENST00000394963 ZFYVE9O95405 1425 aa19.77■□□□□ 0.76
SMARCD1-202ENST00000394963 HSCBQ8IWL3 235 aa19.77■□□□□ 0.76
SMARCD1-202ENST00000394963 PRDM11Q9NQV5 511 aa19.77■□□□□ 0.76
SMARCD1-202ENST00000394963 RICTORQ6R327 1708 aa19.77■□□□□ 0.75
SMARCD1-202ENST00000394963 ANKRD24Q8TF21 1146 aa19.77■□□□□ 0.75
SMARCD1-202ENST00000394963 C22orf23Q9BZE7 217 aa19.77■□□□□ 0.75
SMARCD1-202ENST00000394963 CCDC30Q5VVM6 783 aa19.76■□□□□ 0.75
SMARCD1-202ENST00000394963 CT47B1P0C2W7 299 aaPredicted RBP19.76■□□□□ 0.75
SMARCD1-202ENST00000394963 HMMRO75330 724 aa19.75■□□□□ 0.75
SMARCD1-202ENST00000394963 PLEKHO1Q53GL0 409 aaPredicted RBP19.75■□□□□ 0.75
SMARCD1-202ENST00000394963 TOM1L2Q6ZVM7 507 aa19.75■□□□□ 0.75
SMARCD1-202ENST00000394963 LAMC1P11047 1609 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms