RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 CABP1Q9NZU7 370 aa28.5■■■□□ 2.15
UPK3B-203ENST00000394849 CASZ1Q86V15 1759 aa28.49■■■□□ 2.15
UPK3B-203ENST00000394849 QRICH2Q9H0J4 1663 aa28.48■■■□□ 2.15
UPK3B-203ENST00000394849 COL18A1P39060 1754 aa28.47■■■□□ 2.15
UPK3B-203ENST00000394849 WNK3Q9BYP7 1800 aa28.47■■■□□ 2.15
UPK3B-203ENST00000394849 AKAP12Q02952 1782 aa28.47■■■□□ 2.15
UPK3B-203ENST00000394849 KCNH5Q8NCM2 988 aa28.46■■■□□ 2.15
UPK3B-203ENST00000394849 ANO8Q9HCE9 1232 aaPredicted RBP28.46■■■□□ 2.15
UPK3B-203ENST00000394849 MARCH10Q8NA82 808 aaPredicted RBP28.44■■■□□ 2.14
UPK3B-203ENST00000394849 ZNF692Q9BU19 519 aaPredicted RBP28.44■■■□□ 2.14
UPK3B-203ENST00000394849 PIK3C2AO00443 1686 aa28.43■■■□□ 2.14
UPK3B-203ENST00000394849 CARD10Q9BWT7 1032 aa28.43■■■□□ 2.14
UPK3B-203ENST00000394849 CPSF1Q10570 1443 aaKnown RBP28.43■■■□□ 2.14
UPK3B-203ENST00000394849 EVC2Q86UK5 1308 aa28.43■■■□□ 2.14
UPK3B-203ENST00000394849 ARHGEF25Q86VW2 580 aa28.42■■■□□ 2.14
UPK3B-203ENST00000394849 PROM2Q8N271 834 aa28.42■■■□□ 2.14
UPK3B-203ENST00000394849 AXIN2Q9Y2T1 843 aa28.42■■■□□ 2.14
UPK3B-203ENST00000394849 STK32BQ9NY57 414 aa28.41■■■□□ 2.14
UPK3B-203ENST00000394849 EXOC5O00471 708 aa28.39■■■□□ 2.14
UPK3B-203ENST00000394849 ZBTB7AO95365 584 aa28.38■■■□□ 2.13
UPK3B-203ENST00000394849 CSB-PGBD3P0DP91 1061 aa28.38■■■□□ 2.13
UPK3B-203ENST00000394849 TXNRD1Q16881 649 aa28.38■■■□□ 2.13
UPK3B-203ENST00000394849 PTF1AQ7RTS3 328 aa28.38■■■□□ 2.13
UPK3B-203ENST00000394849 TTC21AQ8NDW8 1320 aa28.38■■■□□ 2.13
UPK3B-203ENST00000394849 CCDC7Q96M83 1385 aa28.37■■■□□ 2.13
UPK3B-203ENST00000394849 PTGER2P43116 358 aa28.37■■■□□ 2.13
UPK3B-203ENST00000394849 SLC15A2Q16348 729 aa28.36■■■□□ 2.13
UPK3B-203ENST00000394849 TTC21BQ7Z4L5 1316 aa28.36■■■□□ 2.13
UPK3B-203ENST00000394849 TRPM1Q7Z4N2 1603 aa28.36■■■□□ 2.13
UPK3B-203ENST00000394849 ABCC6O95255 1503 aa28.35■■■□□ 2.13
UPK3B-203ENST00000394849 RGPD5Q99666 1765 aa28.34■■■□□ 2.13
UPK3B-203ENST00000394849 PDGFDQ9GZP0 370 aaPredicted RBP28.34■■■□□ 2.13
UPK3B-203ENST00000394849 MYOM1P52179 1685 aa28.34■■■□□ 2.13
UPK3B-203ENST00000394849 MTFR1LQ9H019 292 aa28.33■■■□□ 2.13
UPK3B-203ENST00000394849 ATF5Q9Y2D1 282 aaPredicted RBP28.32■■■□□ 2.12
UPK3B-203ENST00000394849 TNS2Q63HR2 1409 aa28.3■■■□□ 2.12
UPK3B-203ENST00000394849 SYT17Q9BSW7 474 aa28.3■■■□□ 2.12
UPK3B-203ENST00000394849 ZNF784Q8NCA9 323 aaPredicted RBP28.28■■■□□ 2.12
UPK3B-203ENST00000394849 FHDC1Q9C0D6 1143 aaPredicted RBP28.28■■■□□ 2.12
UPK3B-203ENST00000394849 NFAT5O94916 1531 aa28.28■■■□□ 2.12
UPK3B-203ENST00000394849 CHD4Q14839 1912 aa28.27■■■□□ 2.12
UPK3B-203ENST00000394849 NHSQ6T4R5 1651 aa28.26■■■□□ 2.12
UPK3B-203ENST00000394849 SOX12O15370 315 aa28.26■■■□□ 2.11
UPK3B-203ENST00000394849 KTN1Q86UP2 1357 aaKnown RBP28.24■■■□□ 2.11
UPK3B-203ENST00000394849 SGIP1Q9BQI5 828 aa28.24■■■□□ 2.11
UPK3B-203ENST00000394849 UTRNP46939 3433 aa28.24■■■□□ 2.11
UPK3B-203ENST00000394849 L3MBTL2Q969R5 705 aa28.23■■■□□ 2.11
UPK3B-203ENST00000394849 MAP3K5Q99683 1374 aa28.22■■■□□ 2.11
UPK3B-203ENST00000394849 ARXQ96QS3 562 aa28.2■■■□□ 2.1
UPK3B-203ENST00000394849 USP31Q70CQ4 1352 aa28.2■■■□□ 2.1
UPK3B-203ENST00000394849 ERBB3P21860 1342 aa28.19■■■□□ 2.1
UPK3B-203ENST00000394849 IL2RBP14784 551 aa28.19■■■□□ 2.1
UPK3B-203ENST00000394849 ROCK2O75116 1388 aaKnown RBP28.19■■■□□ 2.1
UPK3B-203ENST00000394849 NLRP2Q9NX02 1062 aa28.18■■■□□ 2.1
UPK3B-203ENST00000394849 MON2Q7Z3U7 1717 aa28.18■■■□□ 2.1
UPK3B-203ENST00000394849 USP54Q70EL1 1684 aa28.16■■■□□ 2.1
UPK3B-203ENST00000394849 PAPPAQ13219 1627 aa28.16■■■□□ 2.1
UPK3B-203ENST00000394849 KAT6BQ8WYB5 2073 aa28.15■■■□□ 2.1
UPK3B-203ENST00000394849 ACSBG1Q96GR2 724 aa28.15■■■□□ 2.1
UPK3B-203ENST00000394849 BTAF1O14981 1849 aa28.14■■■□□ 2.1
UPK3B-203ENST00000394849 SLC16A10Q8TF71 515 aa28.14■■■□□ 2.1
UPK3B-203ENST00000394849 SBNO2Q9Y2G9 1366 aa28.13■■■□□ 2.09
UPK3B-203ENST00000394849 LTN1O94822 1766 aa28.11■■■□□ 2.09
UPK3B-203ENST00000394849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.11■■■□□ 2.09
UPK3B-203ENST00000394849 SLC27A3Q5K4L6 730 aa28.1■■■□□ 2.09
UPK3B-203ENST00000394849 ANKRD24Q8TF21 1146 aa28.09■■■□□ 2.09
UPK3B-203ENST00000394849 C1QTNF8P60827 252 aa28.08■■■□□ 2.09
UPK3B-203ENST00000394849 QSER1Q2KHR3 1735 aa28.07■■■□□ 2.08
UPK3B-203ENST00000394849 POLD1P28340 1107 aa28.07■■■□□ 2.08
UPK3B-203ENST00000394849 GPR162Q16538 588 aa28.07■■■□□ 2.08
UPK3B-203ENST00000394849 HDGFL2Q7Z4V5 671 aaPredicted RBP28.07■■■□□ 2.08
UPK3B-203ENST00000394849 ZNF827Q17R98 1081 aa28.06■■■□□ 2.08
UPK3B-203ENST00000394849 NME9Q86XW9 330 aa28.06■■■□□ 2.08
UPK3B-203ENST00000394849 LRRC4BQ9NT99 713 aa28.06■■■□□ 2.08
UPK3B-203ENST00000394849 SENP3-EIF4A1A0A087X0R7 540 aa28.05■■■□□ 2.08
UPK3B-203ENST00000394849 AKT1S1Q96B36 256 aa28.04■■■□□ 2.08
UPK3B-203ENST00000394849 EDC4Q6P2E9 1401 aaKnown RBP28.03■■■□□ 2.08
UPK3B-203ENST00000394849 CD163L1Q9NR16 1453 aa28.02■■■□□ 2.08
UPK3B-203ENST00000394849 TERF2IPQ9NYB0 399 aa28.02■■■□□ 2.08
UPK3B-203ENST00000394849 FAM208AQ9UK61 1670 aaKnown RBP28.02■■■□□ 2.08
UPK3B-203ENST00000394849 COL24A1Q17RW2 1714 aa28.01■■■□□ 2.07
UPK3B-203ENST00000394849 TMC1Q8TDI8 760 aa28.01■■■□□ 2.07
UPK3B-203ENST00000394849 SIN3AQ96ST3 1273 aa28■■■□□ 2.07
UPK3B-203ENST00000394849 IP6K1Q92551 441 aa27.99■■■□□ 2.07
UPK3B-203ENST00000394849 PUS7Q96PZ0 661 aaKnown RBP27.98■■■□□ 2.07
UPK3B-203ENST00000394849 TFCP2L1Q9NZI6 479 aa27.98■■■□□ 2.07
UPK3B-203ENST00000394849 NEUROD1Q13562 356 aa27.97■■■□□ 2.07
UPK3B-203ENST00000394849 DDX54Q8TDD1 881 aaKnown RBP27.97■■■□□ 2.07
UPK3B-203ENST00000394849 PNPLA7Q6ZV29 1317 aa27.96■■■□□ 2.07
UPK3B-203ENST00000394849 SLC12A5Q9H2X9 1139 aa27.95■■■□□ 2.06
UPK3B-203ENST00000394849 ANKRD36BQ8N2N9 1353 aa27.95■■■□□ 2.06
UPK3B-203ENST00000394849 GIGYF1O75420 1035 aaPredicted RBP27.94■■■□□ 2.06
UPK3B-203ENST00000394849 KLHL34Q8N239 644 aa27.94■■■□□ 2.06
UPK3B-203ENST00000394849 CARD11Q9BXL7 1154 aa27.94■■■□□ 2.06
UPK3B-203ENST00000394849 GOLGB1Q14789 3259 aaKnown RBP27.93■■■□□ 2.06
UPK3B-203ENST00000394849 HMGB2P26583 209 aaKnown RBP27.93■■■□□ 2.06
UPK3B-203ENST00000394849 SYTL4Q96C24 671 aaPredicted RBP27.92■■■□□ 2.06
UPK3B-203ENST00000394849 A0A1W2PP64 1363 aa27.91■■■□□ 2.06
UPK3B-203ENST00000394849 PRIM1P49642 420 aaKnown RBP27.91■■■□□ 2.06
UPK3B-203ENST00000394849 LY75O60449 1722 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms