RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PLEKHH1Q9ULM0 1364 aa9.37□□□□□ -0.91
RTN4-205ENST00000394609 MYO3AQ8NEV4 1616 aa9.37□□□□□ -0.91
RTN4-205ENST00000394609 UBR1Q8IWV7 1749 aa9.37□□□□□ -0.91
RTN4-205ENST00000394609 PARD3Q8TEW0 1356 aa9.36□□□□□ -0.91
RTN4-205ENST00000394609 ABCC11Q96J66 1382 aa9.36□□□□□ -0.91
RTN4-205ENST00000394609 QRICH2Q9H0J4 1663 aa9.36□□□□□ -0.91
RTN4-205ENST00000394609 PLEKHG1Q9ULL1 1385 aa9.36□□□□□ -0.91
RTN4-205ENST00000394609 FOXK1P85037 733 aa9.36□□□□□ -0.91
RTN4-205ENST00000394609 PTCD2Q8WV60 388 aaKnown RBP9.36□□□□□ -0.91
RTN4-205ENST00000394609 CDK19Q9BWU1 502 aa9.36□□□□□ -0.91
RTN4-205ENST00000394609 ADAMTS13Q76LX8 1427 aa9.35□□□□□ -0.91
RTN4-205ENST00000394609 TBC1D12O60347 775 aa9.35□□□□□ -0.91
RTN4-205ENST00000394609 NLRP13Q86W25 1043 aa9.35□□□□□ -0.91
RTN4-205ENST00000394609 PNISRQ8TF01 805 aaKnown RBP9.35□□□□□ -0.91
RTN4-205ENST00000394609 ARHGEF28Q8N1W1 1705 aaKnown RBP9.35□□□□□ -0.91
RTN4-205ENST00000394609 RIMS1Q86UR5 1692 aaKnown RBP9.35□□□□□ -0.91
RTN4-205ENST00000394609 TULP4Q9NRJ4 1543 aa9.35□□□□□ -0.91
RTN4-205ENST00000394609 SENP3-EIF4A1A0A087X0R7 540 aa9.34□□□□□ -0.91
RTN4-205ENST00000394609 BCL11AQ9H165 835 aa9.34□□□□□ -0.91
RTN4-205ENST00000394609 KDM5AP29375 1690 aaKnown RBP9.34□□□□□ -0.91
RTN4-205ENST00000394609 NRXN3Q9Y4C0 1643 aa9.34□□□□□ -0.91
RTN4-205ENST00000394609 PUS7Q96PZ0 661 aaKnown RBP9.34□□□□□ -0.91
RTN4-205ENST00000394609 GPHNQ9NQX3 736 aaPredicted RBP9.34□□□□□ -0.91
RTN4-205ENST00000394609 BRD4O60885 1362 aaPredicted RBP9.33□□□□□ -0.92
RTN4-205ENST00000394609 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
RTN4-205ENST00000394609 ARHGAP23Q9P227 1491 aa9.33□□□□□ -0.92
RTN4-205ENST00000394609 SLIT1O75093 1534 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 PPP2R1AP30153 589 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 CABP1Q9NZU7 370 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 AMOTL2Q9Y2J4 779 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 TBX22Q9Y458 520 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 MYOM1P52179 1685 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 ADAMTSL3P82987 1691 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 NSD3Q9BZ95 1437 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 ROBO2Q9HCK4 1378 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 ANKLE2Q86XL3 938 aa9.32□□□□□ -0.92
RTN4-205ENST00000394609 WASLO00401 505 aaPredicted RBP9.31□□□□□ -0.92
RTN4-205ENST00000394609 TNNT2P45379 298 aaPredicted RBP9.31□□□□□ -0.92
RTN4-205ENST00000394609 SIRT1Q96EB6 747 aa9.31□□□□□ -0.92
RTN4-205ENST00000394609 SETD1AO15047 1707 aaKnown RBP9.31□□□□□ -0.92
RTN4-205ENST00000394609 DLC1Q96QB1 1528 aa9.31□□□□□ -0.92
RTN4-205ENST00000394609 CEP170BQ9Y4F5 1589 aaPredicted RBP9.3□□□□□ -0.92
RTN4-205ENST00000394609 PTPRUQ92729 1446 aa9.3□□□□□ -0.92
RTN4-205ENST00000394609 ATAD2Q6PL18 1390 aa9.3□□□□□ -0.92
RTN4-205ENST00000394609 NPC1L1Q9UHC9 1359 aa9.3□□□□□ -0.92
RTN4-205ENST00000394609 MED14O60244 1454 aa9.3□□□□□ -0.92
RTN4-205ENST00000394609 NCKAP5LQ9HCH0 1330 aa9.3□□□□□ -0.92
RTN4-205ENST00000394609 MORC1Q86VD1 984 aa9.3□□□□□ -0.92
RTN4-205ENST00000394609 ANKRD36BQ8N2N9 1353 aa9.29□□□□□ -0.92
RTN4-205ENST00000394609 CGNL1Q0VF96 1302 aa9.29□□□□□ -0.92
RTN4-205ENST00000394609 TECPR2O15040 1411 aa9.29□□□□□ -0.92
RTN4-205ENST00000394609 FAM135BQ49AJ0 1406 aa9.29□□□□□ -0.92
RTN4-205ENST00000394609 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
RTN4-205ENST00000394609 PPP4R3BQ5MIZ7 849 aa9.29□□□□□ -0.92
RTN4-205ENST00000394609 TERF2IPQ9NYB0 399 aa9.29□□□□□ -0.92
RTN4-205ENST00000394609 A0A1W2PP64 1363 aa9.29□□□□□ -0.92
RTN4-205ENST00000394609 KDM4FA0A1W2PPD8 638 aa9.28□□□□□ -0.92
RTN4-205ENST00000394609 NUDT16Q96DE0 195 aaKnown RBP9.28□□□□□ -0.92
RTN4-205ENST00000394609 AXIN2Q9Y2T1 843 aa9.28□□□□□ -0.92
RTN4-205ENST00000394609 TK2O00142 265 aa9.28□□□□□ -0.92
RTN4-205ENST00000394609 KCNA6P17658 529 aa9.28□□□□□ -0.92
RTN4-205ENST00000394609 POTEEQ6S8J3 1075 aa9.28□□□□□ -0.92
RTN4-205ENST00000394609 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
RTN4-205ENST00000394609 NINLQ9Y2I6 1382 aa9.27□□□□□ -0.93
RTN4-205ENST00000394609 DSG2Q14126 1118 aa9.27□□□□□ -0.93
RTN4-205ENST00000394609 GGNBP2Q9H3C7 697 aa9.27□□□□□ -0.93
RTN4-205ENST00000394609 ADGRD1Q6QNK2 874 aa9.26□□□□□ -0.93
RTN4-205ENST00000394609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.26□□□□□ -0.93
RTN4-205ENST00000394609 RBM33Q96EV2 1170 aaKnown RBP9.26□□□□□ -0.93
RTN4-205ENST00000394609 ADAMTS8Q9UP79 889 aa9.25□□□□□ -0.93
RTN4-205ENST00000394609 SALL2Q9Y467 1007 aaPredicted RBP9.25□□□□□ -0.93
RTN4-205ENST00000394609 ZBED9Q6R2W3 1325 aa9.25□□□□□ -0.93
RTN4-205ENST00000394609 PRR36Q9H6K5 1346 aa9.25□□□□□ -0.93
RTN4-205ENST00000394609 CD163L1Q9NR16 1453 aa9.25□□□□□ -0.93
RTN4-205ENST00000394609 CPS1P31327 1500 aa9.25□□□□□ -0.93
RTN4-205ENST00000394609 FYB1O15117 783 aa9.25□□□□□ -0.93
RTN4-205ENST00000394609 PPIP5K1Q6PFW1 1433 aa9.25□□□□□ -0.93
RTN4-205ENST00000394609 HCSTQ9UBK5 93 aa9.25□□□□□ -0.93
RTN4-205ENST00000394609 WDR43Q15061 677 aaKnown RBP eCLIP9.24□□□□□ -0.93
RTN4-205ENST00000394609 SETD1BQ9UPS6 1966 aaKnown RBP9.24□□□□□ -0.93
RTN4-205ENST00000394609 MTHFSP49914 203 aa9.23□□□□□ -0.93
RTN4-205ENST00000394609 HSPA2P54652 639 aa9.23□□□□□ -0.93
RTN4-205ENST00000394609 PIK3R4Q99570 1358 aa9.22□□□□□ -0.93
RTN4-205ENST00000394609 KNDC1Q76NI1 1749 aa9.22□□□□□ -0.93
RTN4-205ENST00000394609 NPHP4O75161 1426 aaPredicted RBP9.22□□□□□ -0.93
RTN4-205ENST00000394609 PTCH1Q13635 1447 aa9.22□□□□□ -0.93
RTN4-205ENST00000394609 FBLN1P23142 703 aa9.21□□□□□ -0.93
RTN4-205ENST00000394609 NME9Q86XW9 330 aa9.21□□□□□ -0.93
RTN4-205ENST00000394609 PMFBP1Q8TBY8 1022 aa9.21□□□□□ -0.93
RTN4-205ENST00000394609 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.21□□□□□ -0.93
RTN4-205ENST00000394609 NSD2O96028 1365 aa9.21□□□□□ -0.93
RTN4-205ENST00000394609 DIP2AQ14689 1571 aa9.21□□□□□ -0.94
RTN4-205ENST00000394609 ZNF142P52746 1687 aaPredicted RBP9.21□□□□□ -0.94
RTN4-205ENST00000394609 OXER1Q8TDS5 423 aa9.21□□□□□ -0.94
RTN4-205ENST00000394609 FANCIQ9NVI1 1328 aa9.21□□□□□ -0.94
RTN4-205ENST00000394609 CPSF1Q10570 1443 aaKnown RBP9.21□□□□□ -0.94
RTN4-205ENST00000394609 ATP7BP35670 1465 aa9.2□□□□□ -0.94
RTN4-205ENST00000394609 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
RTN4-205ENST00000394609 CCDC146Q8IYE0 955 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms