RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 LTN1O94822 1766 aa19.53■□□□□ 0.72
CCT4-201ENST00000394440 TMEM94Q12767 1356 aa19.53■□□□□ 0.72
CCT4-201ENST00000394440 KIF24Q5T7B8 1368 aa19.53■□□□□ 0.72
CCT4-201ENST00000394440 HSP90AB2PQ58FF8 381 aa19.52■□□□□ 0.71
CCT4-201ENST00000394440 IL16Q14005 1332 aa19.51■□□□□ 0.71
CCT4-201ENST00000394440 NFAT5O94916 1531 aa19.51■□□□□ 0.71
CCT4-201ENST00000394440 RIPK4P57078 832 aa19.51■□□□□ 0.71
CCT4-201ENST00000394440 ABTB2Q8N961 1025 aa19.51■□□□□ 0.71
CCT4-201ENST00000394440 PHACTR3Q96KR7 559 aa19.51■□□□□ 0.71
CCT4-201ENST00000394440 ORAI2Q96SN7 254 aa19.51■□□□□ 0.71
CCT4-201ENST00000394440 MST1RQ04912 1400 aa19.51■□□□□ 0.71
CCT4-201ENST00000394440 PLIN1O60240 522 aa19.51■□□□□ 0.71
CCT4-201ENST00000394440 PHRF1Q9P1Y6 1649 aaKnown RBP19.5■□□□□ 0.71
CCT4-201ENST00000394440 SOX12O15370 315 aa19.5■□□□□ 0.71
CCT4-201ENST00000394440 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
CCT4-201ENST00000394440 NFE2L2Q16236 605 aa19.49■□□□□ 0.71
CCT4-201ENST00000394440 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
CCT4-201ENST00000394440 PAK3O75914 559 aaPredicted RBP19.49■□□□□ 0.71
CCT4-201ENST00000394440 NEFMP07197 916 aa19.49■□□□□ 0.71
CCT4-201ENST00000394440 EXOC6Q8TAG9 804 aa19.48■□□□□ 0.71
CCT4-201ENST00000394440 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
CCT4-201ENST00000394440 PSME1Q06323 249 aa19.48■□□□□ 0.71
CCT4-201ENST00000394440 NUTM2GQ5VZR2 741 aa19.47■□□□□ 0.71
CCT4-201ENST00000394440 SLIT3O75094 1523 aa19.47■□□□□ 0.71
CCT4-201ENST00000394440 ALS2Q96Q42 1657 aa19.47■□□□□ 0.71
CCT4-201ENST00000394440 RTL1A6NKG5 1358 aa19.46■□□□□ 0.71
CCT4-201ENST00000394440 FANCIQ9NVI1 1328 aa19.46■□□□□ 0.71
CCT4-201ENST00000394440 AEBP1Q8IUX7 1158 aa19.46■□□□□ 0.71
CCT4-201ENST00000394440 KDRP35968 1356 aa19.45■□□□□ 0.7
CCT4-201ENST00000394440 FOXO3O43524 673 aa19.45■□□□□ 0.7
CCT4-201ENST00000394440 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.45■□□□□ 0.7
CCT4-201ENST00000394440 BCAR3O75815 825 aa19.44■□□□□ 0.7
CCT4-201ENST00000394440 AMPHP49418 695 aa19.44■□□□□ 0.7
CCT4-201ENST00000394440 C20orf194Q5TEA3 1177 aa19.44■□□□□ 0.7
CCT4-201ENST00000394440 SULT6B1Q6IMI4 303 aa19.44■□□□□ 0.7
CCT4-201ENST00000394440 IGSF1Q8N6C5 1336 aa19.44■□□□□ 0.7
CCT4-201ENST00000394440 HOXC9P31274 260 aa19.44■□□□□ 0.7
CCT4-201ENST00000394440 CT47B1P0C2W7 299 aaPredicted RBP19.42■□□□□ 0.7
CCT4-201ENST00000394440 ATF3P18847 181 aa19.42■□□□□ 0.7
CCT4-201ENST00000394440 RARSP54136 660 aaKnown RBP19.42■□□□□ 0.7
CCT4-201ENST00000394440 TSR2Q969E8 191 aaKnown RBP19.42■□□□□ 0.7
CCT4-201ENST00000394440 CRBNQ96SW2 442 aa19.42■□□□□ 0.7
CCT4-201ENST00000394440 CCDC136Q96JN2 1154 aa19.42■□□□□ 0.7
CCT4-201ENST00000394440 USP19O94966 1318 aa19.4■□□□□ 0.7
CCT4-201ENST00000394440 CADPS2Q86UW7 1296 aa19.4■□□□□ 0.7
CCT4-201ENST00000394440 MSH6P52701 1360 aa19.4■□□□□ 0.7
CCT4-201ENST00000394440 LMOD3Q0VAK6 560 aa19.4■□□□□ 0.7
CCT4-201ENST00000394440 KCNH5Q8NCM2 988 aa19.4■□□□□ 0.7
CCT4-201ENST00000394440 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
CCT4-201ENST00000394440 XPCQ01831 940 aaPredicted RBP19.39■□□□□ 0.69
CCT4-201ENST00000394440 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.69
CCT4-201ENST00000394440 EYA1Q99502 592 aa19.39■□□□□ 0.69
CCT4-201ENST00000394440 CALD1Q05682 793 aaKnown RBP19.38■□□□□ 0.69
CCT4-201ENST00000394440 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
CCT4-201ENST00000394440 ZNF853P0CG23 659 aa19.36■□□□□ 0.69
CCT4-201ENST00000394440 IP6K1Q92551 441 aa19.36■□□□□ 0.69
CCT4-201ENST00000394440 THUMPD2Q9BTF0 503 aaKnown RBP19.36■□□□□ 0.69
CCT4-201ENST00000394440 MED1Q15648 1581 aaPredicted RBP19.36■□□□□ 0.69
CCT4-201ENST00000394440 IFT57Q9NWB7 429 aa19.35■□□□□ 0.69
CCT4-201ENST00000394440 RGPD2P0DJD1 1756 aa19.35■□□□□ 0.69
CCT4-201ENST00000394440 CRYBG1Q9Y4K1 1723 aa19.35■□□□□ 0.69
CCT4-201ENST00000394440 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
CCT4-201ENST00000394440 PXDNQ92626 1479 aa19.34■□□□□ 0.69
CCT4-201ENST00000394440 GCP02774 474 aa19.34■□□□□ 0.69
CCT4-201ENST00000394440 GNAI1P63096 354 aa19.33■□□□□ 0.69
CCT4-201ENST00000394440 TSHZ2Q9NRE2 1034 aa19.33■□□□□ 0.69
CCT4-201ENST00000394440 CAMTA1Q9Y6Y1 1673 aa19.33■□□□□ 0.68
CCT4-201ENST00000394440 FAM83GA6ND36 823 aa19.33■□□□□ 0.68
CCT4-201ENST00000394440 ARHGEF25Q86VW2 580 aa19.33■□□□□ 0.68
CCT4-201ENST00000394440 LRRC37A3O60309 1634 aa19.32■□□□□ 0.68
CCT4-201ENST00000394440 NPHP3Q7Z494 1330 aa19.32■□□□□ 0.68
CCT4-201ENST00000394440 CFAP44Q96MT7 982 aa19.31■□□□□ 0.68
CCT4-201ENST00000394440 RGPD5Q99666 1765 aa19.31■□□□□ 0.68
CCT4-201ENST00000394440 NCAPD2Q15021 1401 aa19.31■□□□□ 0.68
CCT4-201ENST00000394440 TNS3Q68CZ2 1445 aa19.3■□□□□ 0.68
CCT4-201ENST00000394440 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
CCT4-201ENST00000394440 MTHFSDQ2M296 383 aaKnown RBP19.3■□□□□ 0.68
CCT4-201ENST00000394440 BCL2L13Q9BXK5 485 aa19.3■□□□□ 0.68
CCT4-201ENST00000394440 MBIPQ9NS73 344 aa19.29■□□□□ 0.68
CCT4-201ENST00000394440 DDX17Q92841 729 aaKnown RBP19.29■□□□□ 0.68
CCT4-201ENST00000394440 ZNF428Q96B54 188 aa19.28■□□□□ 0.68
CCT4-201ENST00000394440 CRB1P82279 1406 aa19.28■□□□□ 0.68
CCT4-201ENST00000394440 LMOD2Q6P5Q4 547 aa19.28■□□□□ 0.68
CCT4-201ENST00000394440 SSH1Q8WYL5 1049 aa19.28■□□□□ 0.68
CCT4-201ENST00000394440 COL18A1P39060 1754 aa19.28■□□□□ 0.68
CCT4-201ENST00000394440 GAS2L2Q8NHY3 880 aa19.27■□□□□ 0.68
CCT4-201ENST00000394440 FRAT1Q92837 279 aaPredicted RBP19.27■□□□□ 0.68
CCT4-201ENST00000394440 LTV1Q96GA3 475 aaPredicted RBP19.27■□□□□ 0.68
CCT4-201ENST00000394440 LAS1LQ9Y4W2 734 aaKnown RBP19.27■□□□□ 0.68
CCT4-201ENST00000394440 TOM1O60784 492 aa19.27■□□□□ 0.68
CCT4-201ENST00000394440 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.68
CCT4-201ENST00000394440 LMO7Q8WWI1 1683 aa19.26■□□□□ 0.67
CCT4-201ENST00000394440 ALDH1L2Q3SY69 923 aa19.26■□□□□ 0.67
CCT4-201ENST00000394440 BRINP3Q76B58 766 aa19.26■□□□□ 0.67
CCT4-201ENST00000394440 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
CCT4-201ENST00000394440 SMC4Q9NTJ3 1288 aa19.26■□□□□ 0.67
CCT4-201ENST00000394440 ABCC6O95255 1503 aa19.25■□□□□ 0.67
CCT4-201ENST00000394440 BRPF1P55201 1214 aaPredicted RBP19.25■□□□□ 0.67
CCT4-201ENST00000394440 NBPF6Q5VWK0 638 aa19.25■□□□□ 0.67
CCT4-201ENST00000394440 MCM10Q7L590 875 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms