RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 ZBTB40Q9NUA8 1239 aa24.79■■□□□ 1.56
RCCD1-201ENST00000394258 ROBO2Q9HCK4 1378 aa24.78■■□□□ 1.56
RCCD1-201ENST00000394258 SLC26A8Q96RN1 970 aa24.78■■□□□ 1.56
RCCD1-201ENST00000394258 GSE1Q14687 1217 aa24.78■■□□□ 1.56
RCCD1-201ENST00000394258 SLKQ9H2G2 1235 aaPredicted RBP24.78■■□□□ 1.56
RCCD1-201ENST00000394258 EIF5BO60841 1220 aaKnown RBP24.77■■□□□ 1.56
RCCD1-201ENST00000394258 ALDH1L2Q3SY69 923 aa24.77■■□□□ 1.56
RCCD1-201ENST00000394258 MBIPQ9NS73 344 aa24.77■■□□□ 1.56
RCCD1-201ENST00000394258 VAMP4O75379 141 aa24.77■■□□□ 1.56
RCCD1-201ENST00000394258 LTKP29376 864 aa24.77■■□□□ 1.56
RCCD1-201ENST00000394258 HDAC1Q13547 482 aaPredicted RBP24.77■■□□□ 1.56
RCCD1-201ENST00000394258 UPF2Q9HAU5 1272 aaKnown RBP24.76■■□□□ 1.55
RCCD1-201ENST00000394258 TMEM2Q9UHN6 1383 aa24.76■■□□□ 1.55
RCCD1-201ENST00000394258 CDC42BPGQ6DT37 1551 aa24.75■■□□□ 1.55
RCCD1-201ENST00000394258 GNAI1P63096 354 aa24.74■■□□□ 1.55
RCCD1-201ENST00000394258 AEBP1Q8IUX7 1158 aa24.74■■□□□ 1.55
RCCD1-201ENST00000394258 C1orf115Q9H7X2 142 aa24.74■■□□□ 1.55
RCCD1-201ENST00000394258 TBC1D32Q96NH3 1257 aa24.73■■□□□ 1.55
RCCD1-201ENST00000394258 ZNF692Q9BU19 519 aaPredicted RBP24.73■■□□□ 1.55
RCCD1-201ENST00000394258 KIF13AQ9H1H9 1805 aa24.73■■□□□ 1.55
RCCD1-201ENST00000394258 AATKQ6ZMQ8 1374 aa24.72■■□□□ 1.55
RCCD1-201ENST00000394258 CALD1Q05682 793 aaKnown RBP24.72■■□□□ 1.55
RCCD1-201ENST00000394258 C8orf58Q8NAV2 365 aa24.72■■□□□ 1.55
RCCD1-201ENST00000394258 ACEP12821 1306 aa24.72■■□□□ 1.55
RCCD1-201ENST00000394258 MRPL50Q8N5N7 158 aaKnown RBP24.71■■□□□ 1.55
RCCD1-201ENST00000394258 SIRT1Q96EB6 747 aa24.71■■□□□ 1.55
RCCD1-201ENST00000394258 IFT57Q9NWB7 429 aa24.71■■□□□ 1.55
RCCD1-201ENST00000394258 CDK12Q9NYV4 1490 aaPredicted RBP24.71■■□□□ 1.55
RCCD1-201ENST00000394258 TWISTNBQ3B726 338 aaPredicted RBP24.7■■□□□ 1.55
RCCD1-201ENST00000394258 SULT6B1Q6IMI4 303 aa24.7■■□□□ 1.55
RCCD1-201ENST00000394258 SMC5Q8IY18 1101 aa24.7■■□□□ 1.55
RCCD1-201ENST00000394258 LNPKQ9C0E8 428 aa24.7■■□□□ 1.55
RCCD1-201ENST00000394258 BECN1Q14457 450 aa24.69■■□□□ 1.54
RCCD1-201ENST00000394258 TECPR2O15040 1411 aa24.69■■□□□ 1.54
RCCD1-201ENST00000394258 MFAP1P55081 439 aaKnown RBP24.69■■□□□ 1.54
RCCD1-201ENST00000394258 SPRYD3Q8NCJ5 442 aa24.69■■□□□ 1.54
RCCD1-201ENST00000394258 TTC21BQ7Z4L5 1316 aa24.69■■□□□ 1.54
RCCD1-201ENST00000394258 ZNF853P0CG23 659 aa24.68■■□□□ 1.54
RCCD1-201ENST00000394258 EIF4A2Q14240 407 aaKnown RBP24.68■■□□□ 1.54
RCCD1-201ENST00000394258 CFAP44Q96MT7 982 aa24.68■■□□□ 1.54
RCCD1-201ENST00000394258 TBC1D2Q9BYX2 928 aa24.68■■□□□ 1.54
RCCD1-201ENST00000394258 ADAMTS13Q76LX8 1427 aa24.68■■□□□ 1.54
RCCD1-201ENST00000394258 ZBTB7BO15156 539 aaPredicted RBP24.66■■□□□ 1.54
RCCD1-201ENST00000394258 HSP90AB2PQ58FF8 381 aa24.66■■□□□ 1.54
RCCD1-201ENST00000394258 ZNF428Q96B54 188 aa24.66■■□□□ 1.54
RCCD1-201ENST00000394258 LMOD3Q0VAK6 560 aa24.65■■□□□ 1.54
RCCD1-201ENST00000394258 KRT24Q2M2I5 525 aa24.65■■□□□ 1.54
RCCD1-201ENST00000394258 MON2Q7Z3U7 1717 aa24.64■■□□□ 1.53
RCCD1-201ENST00000394258 MCM10Q7L590 875 aa24.63■■□□□ 1.53
RCCD1-201ENST00000394258 UBR1Q8IWV7 1749 aa24.63■■□□□ 1.53
RCCD1-201ENST00000394258 BRPF1P55201 1214 aaPredicted RBP24.63■■□□□ 1.53
RCCD1-201ENST00000394258 NUCB1Q02818 461 aa24.62■■□□□ 1.53
RCCD1-201ENST00000394258 DLG5Q8TDM6 1919 aa24.62■■□□□ 1.53
RCCD1-201ENST00000394258 ANKRD45Q5TZF3 282 aa24.62■■□□□ 1.53
RCCD1-201ENST00000394258 ANTXR1Q9H6X2 564 aa24.61■■□□□ 1.53
RCCD1-201ENST00000394258 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
RCCD1-201ENST00000394258 ITSN1Q15811 1721 aa24.61■■□□□ 1.53
RCCD1-201ENST00000394258 CHD1LQ86WJ1 897 aa24.61■■□□□ 1.53
RCCD1-201ENST00000394258 EID1Q9Y6B2 187 aa24.61■■□□□ 1.53
RCCD1-201ENST00000394258 KNDC1Q76NI1 1749 aa24.61■■□□□ 1.53
RCCD1-201ENST00000394258 C3P01024 1663 aa24.61■■□□□ 1.53
RCCD1-201ENST00000394258 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.6■■□□□ 1.53
RCCD1-201ENST00000394258 C22orf23Q9BZE7 217 aa24.6■■□□□ 1.53
RCCD1-201ENST00000394258 ARHGAP45Q92619 1136 aa24.6■■□□□ 1.53
RCCD1-201ENST00000394258 AKAP12Q02952 1782 aa24.59■■□□□ 1.53
RCCD1-201ENST00000394258 PLEKHG3A1L390 1219 aa24.58■■□□□ 1.53
RCCD1-201ENST00000394258 PTPRUQ92729 1446 aa24.58■■□□□ 1.53
RCCD1-201ENST00000394258 PLEKHG1Q9ULL1 1385 aa24.58■■□□□ 1.53
RCCD1-201ENST00000394258 SIRT2Q8IXJ6 389 aa24.57■■□□□ 1.52
RCCD1-201ENST00000394258 MIS18AQ9NYP9 233 aa24.56■■□□□ 1.52
RCCD1-201ENST00000394258 ABCC4O15439 1325 aa24.56■■□□□ 1.52
RCCD1-201ENST00000394258 USP6P35125 1406 aa24.56■■□□□ 1.52
RCCD1-201ENST00000394258 PTCH1Q13635 1447 aa24.55■■□□□ 1.52
RCCD1-201ENST00000394258 NGDNQ8NEJ9 315 aaKnown RBP24.55■■□□□ 1.52
RCCD1-201ENST00000394258 FOXO3O43524 673 aa24.54■■□□□ 1.52
RCCD1-201ENST00000394258 API5Q9BZZ5 524 aaKnown RBP24.53■■□□□ 1.52
RCCD1-201ENST00000394258 OVOS2A0A0J9YW53 1432 aa24.53■■□□□ 1.52
RCCD1-201ENST00000394258 OVOS2Q6IE36 1432 aa24.53■■□□□ 1.52
RCCD1-201ENST00000394258 MAP3K19Q56UN5 1328 aa24.52■■□□□ 1.52
RCCD1-201ENST00000394258 CHMP4BQ9H444 224 aaKnown RBP24.52■■□□□ 1.52
RCCD1-201ENST00000394258 NUTM2GQ5VZR2 741 aa24.51■■□□□ 1.51
RCCD1-201ENST00000394258 PIK3R4Q99570 1358 aa24.51■■□□□ 1.51
RCCD1-201ENST00000394258 GCC1Q96CN9 775 aa24.5■■□□□ 1.51
RCCD1-201ENST00000394258 CHL1O00533 1208 aa24.49■■□□□ 1.51
RCCD1-201ENST00000394258 AMPHP49418 695 aa24.47■■□□□ 1.51
RCCD1-201ENST00000394258 MTHFSDQ2M296 383 aaKnown RBP24.47■■□□□ 1.51
RCCD1-201ENST00000394258 UBE2Q2Q8WVN8 375 aa24.47■■□□□ 1.51
RCCD1-201ENST00000394258 PEAK1Q9H792 1746 aa24.46■■□□□ 1.51
RCCD1-201ENST00000394258 TBX22Q9Y458 520 aa24.46■■□□□ 1.51
RCCD1-201ENST00000394258 NRKQ7Z2Y5 1582 aa24.45■■□□□ 1.5
RCCD1-201ENST00000394258 NLRP6P59044 892 aa24.44■■□□□ 1.5
RCCD1-201ENST00000394258 BMP2KLQ5H9B9 411 aa24.44■■□□□ 1.5
RCCD1-201ENST00000394258 USP31Q70CQ4 1352 aa24.44■■□□□ 1.5
RCCD1-201ENST00000394258 APBB1O00213 710 aa24.43■■□□□ 1.5
RCCD1-201ENST00000394258 SLC4A2P04920 1241 aa24.43■■□□□ 1.5
RCCD1-201ENST00000394258 RTF1Q92541 710 aaKnown RBP24.43■■□□□ 1.5
RCCD1-201ENST00000394258 TOPAZ1Q8N9V7 1692 aa24.42■■□□□ 1.5
RCCD1-201ENST00000394258 THEMISQ8N1K5 641 aaPredicted RBP24.42■■□□□ 1.5
RCCD1-201ENST00000394258 EYA1Q99502 592 aa24.42■■□□□ 1.5
RCCD1-201ENST00000394258 SSH2Q76I76 1423 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms