RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 AK9Q5TCS8 1911 aa20.64■□□□□ 0.89
SIPA1-201ENST00000394224 SULT6B1Q6IMI4 303 aa20.64■□□□□ 0.89
SIPA1-201ENST00000394224 MRPL50Q8N5N7 158 aaKnown RBP20.64■□□□□ 0.89
SIPA1-201ENST00000394224 RBM25P49756 843 aaKnown RBP20.64■□□□□ 0.89
SIPA1-201ENST00000394224 NUTM2GQ5VZR2 741 aa20.64■□□□□ 0.89
SIPA1-201ENST00000394224 PKNOX2Q96KN3 472 aa20.64■□□□□ 0.89
SIPA1-201ENST00000394224 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.89
SIPA1-201ENST00000394224 PPIP5K1Q6PFW1 1433 aa20.63■□□□□ 0.89
SIPA1-201ENST00000394224 LTV1Q96GA3 475 aaPredicted RBP20.63■□□□□ 0.89
SIPA1-201ENST00000394224 RBSNQ9H1K0 784 aa20.62■□□□□ 0.89
SIPA1-201ENST00000394224 SDSP20132 328 aa20.62■□□□□ 0.89
SIPA1-201ENST00000394224 PLEKHM2Q8IWE5 1019 aa20.62■□□□□ 0.89
SIPA1-201ENST00000394224 TSC1Q92574 1164 aa20.62■□□□□ 0.89
SIPA1-201ENST00000394224 ANO2Q9NQ90 1003 aa20.61■□□□□ 0.89
SIPA1-201ENST00000394224 SLC4A2P04920 1241 aa20.61■□□□□ 0.89
SIPA1-201ENST00000394224 ANKRD36BQ8N2N9 1353 aa20.61■□□□□ 0.89
SIPA1-201ENST00000394224 FOXO3O43524 673 aa20.61■□□□□ 0.89
SIPA1-201ENST00000394224 AAMPQ13685 434 aa20.6■□□□□ 0.89
SIPA1-201ENST00000394224 NFE2L2Q16236 605 aa20.6■□□□□ 0.89
SIPA1-201ENST00000394224 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.6■□□□□ 0.89
SIPA1-201ENST00000394224 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
SIPA1-201ENST00000394224 RTEL1-TNFRSF6BF6WH68 1400 aa20.59■□□□□ 0.89
SIPA1-201ENST00000394224 IL1RAPL2Q9NP60 686 aa20.59■□□□□ 0.89
SIPA1-201ENST00000394224 PRDM10Q9NQV6 1147 aa20.59■□□□□ 0.89
SIPA1-201ENST00000394224 TRPM2O94759 1503 aa20.58■□□□□ 0.89
SIPA1-201ENST00000394224 GCC1Q96CN9 775 aa20.58■□□□□ 0.89
SIPA1-201ENST00000394224 MYOM1P52179 1685 aa20.58■□□□□ 0.89
SIPA1-201ENST00000394224 FCHSD2O94868 740 aa20.58■□□□□ 0.88
SIPA1-201ENST00000394224 GNAI1P63096 354 aa20.58■□□□□ 0.88
SIPA1-201ENST00000394224 C14orf37Q86TY3 774 aa20.58■□□□□ 0.88
SIPA1-201ENST00000394224 C17orf53Q8N3J3 647 aaPredicted RBP20.57■□□□□ 0.88
SIPA1-201ENST00000394224 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
SIPA1-201ENST00000394224 SKOR2Q2VWA4 1001 aaPredicted RBP20.56■□□□□ 0.88
SIPA1-201ENST00000394224 IQGAP1P46940 1657 aa20.56■□□□□ 0.88
SIPA1-201ENST00000394224 G2E3Q7L622 706 aa20.55■□□□□ 0.88
SIPA1-201ENST00000394224 ABCA6Q8N139 1617 aa20.55■□□□□ 0.88
SIPA1-201ENST00000394224 NPATQ14207 1427 aa20.55■□□□□ 0.88
SIPA1-201ENST00000394224 CASC1Q6TDU7 716 aa20.55■□□□□ 0.88
SIPA1-201ENST00000394224 SNX21Q969T3 373 aa20.55■□□□□ 0.88
SIPA1-201ENST00000394224 ST18O60284 1047 aa20.54■□□□□ 0.88
SIPA1-201ENST00000394224 COG3Q96JB2 828 aa20.53■□□□□ 0.88
SIPA1-201ENST00000394224 INTS3Q68E01 1043 aaKnown RBP20.53■□□□□ 0.88
SIPA1-201ENST00000394224 TTC22Q5TAA0 569 aa20.52■□□□□ 0.88
SIPA1-201ENST00000394224 ZSCAN30Q86W11 494 aa20.52■□□□□ 0.88
SIPA1-201ENST00000394224 GPT2Q8TD30 523 aa20.52■□□□□ 0.88
SIPA1-201ENST00000394224 CEP152O94986 1710 aa20.52■□□□□ 0.88
SIPA1-201ENST00000394224 CLASP1Q7Z460 1538 aa20.52■□□□□ 0.88
SIPA1-201ENST00000394224 ABCC1P33527 1531 aa20.52■□□□□ 0.87
SIPA1-201ENST00000394224 CT47B1P0C2W7 299 aaPredicted RBP20.52■□□□□ 0.87
SIPA1-201ENST00000394224 USP26Q9BXU7 913 aa20.52■□□□□ 0.87
SIPA1-201ENST00000394224 RNF17Q9BXT8 1623 aaKnown RBP20.51■□□□□ 0.87
SIPA1-201ENST00000394224 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
SIPA1-201ENST00000394224 TMEM63CQ9P1W3 806 aa20.51■□□□□ 0.87
SIPA1-201ENST00000394224 HSP90AB2PQ58FF8 381 aa20.51■□□□□ 0.87
SIPA1-201ENST00000394224 CCDC173Q0VFZ6 552 aa20.51■□□□□ 0.87
SIPA1-201ENST00000394224 ATP7AQ04656 1500 aa20.5■□□□□ 0.87
SIPA1-201ENST00000394224 API5Q9BZZ5 524 aaKnown RBP20.5■□□□□ 0.87
SIPA1-201ENST00000394224 ABCC11Q96J66 1382 aa20.5■□□□□ 0.87
SIPA1-201ENST00000394224 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
SIPA1-201ENST00000394224 RABEP1Q15276 862 aa20.5■□□□□ 0.87
SIPA1-201ENST00000394224 KLHL40Q2TBA0 621 aa20.5■□□□□ 0.87
SIPA1-201ENST00000394224 PALD1Q9ULE6 856 aa20.5■□□□□ 0.87
SIPA1-201ENST00000394224 CPA1P15085 419 aa20.5■□□□□ 0.87
SIPA1-201ENST00000394224 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
SIPA1-201ENST00000394224 LMBRD1Q9NUN5 540 aa20.5■□□□□ 0.87
SIPA1-201ENST00000394224 FKBP5Q13451 457 aaPredicted RBP20.49■□□□□ 0.87
SIPA1-201ENST00000394224 DDIT3P35638 169 aa20.49■□□□□ 0.87
SIPA1-201ENST00000394224 CIZ1Q9ULV3 898 aaPredicted RBP20.48■□□□□ 0.87
SIPA1-201ENST00000394224 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
SIPA1-201ENST00000394224 ZFYVE16Q7Z3T8 1539 aa20.48■□□□□ 0.87
SIPA1-201ENST00000394224 LAMC1P11047 1609 aa20.47■□□□□ 0.87
SIPA1-201ENST00000394224 UQCRHLA0A096LP55 91 aa20.47■□□□□ 0.87
SIPA1-201ENST00000394224 UQCRHP07919 91 aa20.47■□□□□ 0.87
SIPA1-201ENST00000394224 SPHKAPQ2M3C7 1700 aa20.47■□□□□ 0.87
SIPA1-201ENST00000394224 PLXNC1O60486 1568 aa20.47■□□□□ 0.87
SIPA1-201ENST00000394224 GADD45BO75293 160 aaPredicted RBP20.46■□□□□ 0.87
SIPA1-201ENST00000394224 TSPYL4Q9UJ04 414 aa20.46■□□□□ 0.87
SIPA1-201ENST00000394224 MAP3K4Q9Y6R4 1608 aa20.46■□□□□ 0.87
SIPA1-201ENST00000394224 RRP9O43818 475 aaKnown RBP20.46■□□□□ 0.87
SIPA1-201ENST00000394224 CEP85Q6P2H3 762 aa20.46■□□□□ 0.87
SIPA1-201ENST00000394224 CFAP44Q96MT7 982 aa20.46■□□□□ 0.87
SIPA1-201ENST00000394224 NUCB2P80303 420 aa20.46■□□□□ 0.87
SIPA1-201ENST00000394224 TMX3Q96JJ7 454 aa20.45■□□□□ 0.86
SIPA1-201ENST00000394224 ZDHHC9Q9Y397 364 aa20.45■□□□□ 0.86
SIPA1-201ENST00000394224 ANXA1P04083 346 aa20.45■□□□□ 0.86
SIPA1-201ENST00000394224 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
SIPA1-201ENST00000394224 CCDC9Q9Y3X0 531 aaKnown RBP20.44■□□□□ 0.86
SIPA1-201ENST00000394224 FIBPO43427 364 aa20.44■□□□□ 0.86
SIPA1-201ENST00000394224 DCTPP1Q9H773 170 aa20.44■□□□□ 0.86
SIPA1-201ENST00000394224 MSH6P52701 1360 aa20.43■□□□□ 0.86
SIPA1-201ENST00000394224 IFT57Q9NWB7 429 aa20.43■□□□□ 0.86
SIPA1-201ENST00000394224 UNC5CLQ8IV45 518 aa20.43■□□□□ 0.86
SIPA1-201ENST00000394224 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
SIPA1-201ENST00000394224 USP25Q9UHP3 1055 aa20.42■□□□□ 0.86
SIPA1-201ENST00000394224 ERC2O15083 957 aa20.42■□□□□ 0.86
SIPA1-201ENST00000394224 IL13P35225 146 aa20.42■□□□□ 0.86
SIPA1-201ENST00000394224 SPC24Q8NBT2 197 aa20.42■□□□□ 0.86
SIPA1-201ENST00000394224 TTC12Q9H892 705 aaPredicted RBP20.42■□□□□ 0.86
SIPA1-201ENST00000394224 CHD1O14646 1710 aa20.42■□□□□ 0.86
SIPA1-201ENST00000394224 ASXL2Q76L83 1435 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms