RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 CCDC27Q2M243 656 aa25.76■■□□□ 1.72
RAB5C-202ENST00000393860 LMOD2Q6P5Q4 547 aa25.76■■□□□ 1.72
RAB5C-202ENST00000393860 KRT28Q7Z3Y7 464 aa25.76■■□□□ 1.72
RAB5C-202ENST00000393860 FLT4P35916 1363 aa25.76■■□□□ 1.71
RAB5C-202ENST00000393860 RRP1P56182 461 aaKnown RBP25.76■■□□□ 1.71
RAB5C-202ENST00000393860 PHACTR3Q96KR7 559 aa25.76■■□□□ 1.71
RAB5C-202ENST00000393860 CADPS2Q86UW7 1296 aa25.75■■□□□ 1.71
RAB5C-202ENST00000393860 RIPK4P57078 832 aa25.75■■□□□ 1.71
RAB5C-202ENST00000393860 AEBP1Q8IUX7 1158 aa25.75■■□□□ 1.71
RAB5C-202ENST00000393860 TRIM35Q9UPQ4 493 aa25.74■■□□□ 1.71
RAB5C-202ENST00000393860 LTN1O94822 1766 aa25.73■■□□□ 1.71
RAB5C-202ENST00000393860 RGPD1P0DJD0 1748 aa25.73■■□□□ 1.71
RAB5C-202ENST00000393860 NEFMP07197 916 aa25.73■■□□□ 1.71
RAB5C-202ENST00000393860 WDR63Q8IWG1 891 aa25.73■■□□□ 1.71
RAB5C-202ENST00000393860 SULT6B1Q6IMI4 303 aa25.72■■□□□ 1.71
RAB5C-202ENST00000393860 ZBTB7CA1YPR0 619 aa25.71■■□□□ 1.71
RAB5C-202ENST00000393860 NFAT5O94916 1531 aa25.71■■□□□ 1.71
RAB5C-202ENST00000393860 HOXC9P31274 260 aa25.7■■□□□ 1.7
RAB5C-202ENST00000393860 NCBP3Q53F19 620 aaKnown RBP25.7■■□□□ 1.7
RAB5C-202ENST00000393860 PLIN1O60240 522 aa25.69■■□□□ 1.7
RAB5C-202ENST00000393860 NFE2L2Q16236 605 aa25.68■■□□□ 1.7
RAB5C-202ENST00000393860 LTV1Q96GA3 475 aaPredicted RBP25.67■■□□□ 1.7
RAB5C-202ENST00000393860 ALS2Q96Q42 1657 aa25.66■■□□□ 1.7
RAB5C-202ENST00000393860 DLG5Q8TDM6 1919 aa25.65■■□□□ 1.7
RAB5C-202ENST00000393860 ERICH6BQ5W0A0 696 aa25.65■■□□□ 1.7
RAB5C-202ENST00000393860 SLIT3O75094 1523 aa25.64■■□□□ 1.7
RAB5C-202ENST00000393860 ARHGEF10O15013 1369 aa25.64■■□□□ 1.7
RAB5C-202ENST00000393860 KCNH5Q8NCM2 988 aa25.63■■□□□ 1.69
RAB5C-202ENST00000393860 TSR2Q969E8 191 aaKnown RBP25.63■■□□□ 1.69
RAB5C-202ENST00000393860 EYA1Q99502 592 aa25.63■■□□□ 1.69
RAB5C-202ENST00000393860 KIF24Q5T7B8 1368 aa25.63■■□□□ 1.69
RAB5C-202ENST00000393860 GCP02774 474 aa25.62■■□□□ 1.69
RAB5C-202ENST00000393860 THUMPD2Q9BTF0 503 aaKnown RBP25.62■■□□□ 1.69
RAB5C-202ENST00000393860 NPHP3Q7Z494 1330 aa25.61■■□□□ 1.69
RAB5C-202ENST00000393860 MYH16Q9H6N6 1097 aa25.61■■□□□ 1.69
RAB5C-202ENST00000393860 PPP4R2Q9NY27 417 aa25.61■■□□□ 1.69
RAB5C-202ENST00000393860 RTL1A6NKG5 1358 aa25.61■■□□□ 1.69
RAB5C-202ENST00000393860 BRINP3Q76B58 766 aa25.61■■□□□ 1.69
RAB5C-202ENST00000393860 USP19O94966 1318 aa25.6■■□□□ 1.69
RAB5C-202ENST00000393860 IGSF1Q8N6C5 1336 aa25.6■■□□□ 1.69
RAB5C-202ENST00000393860 FANCIQ9NVI1 1328 aa25.6■■□□□ 1.69
RAB5C-202ENST00000393860 MED1Q15648 1581 aaPredicted RBP25.59■■□□□ 1.69
RAB5C-202ENST00000393860 PXDNQ92626 1479 aa25.59■■□□□ 1.69
RAB5C-202ENST00000393860 IP6K1Q92551 441 aa25.59■■□□□ 1.69
RAB5C-202ENST00000393860 BCAR3O75815 825 aa25.58■■□□□ 1.69
RAB5C-202ENST00000393860 SLAIN2Q9P270 581 aa25.57■■□□□ 1.68
RAB5C-202ENST00000393860 FAM83GA6ND36 823 aa25.57■■□□□ 1.68
RAB5C-202ENST00000393860 B4GALNT3Q6L9W6 998 aa25.57■■□□□ 1.68
RAB5C-202ENST00000393860 USHBP1Q8N6Y0 703 aa25.57■■□□□ 1.68
RAB5C-202ENST00000393860 EXOC6Q8TAG9 804 aa25.57■■□□□ 1.68
RAB5C-202ENST00000393860 LAS1LQ9Y4W2 734 aaKnown RBP25.57■■□□□ 1.68
RAB5C-202ENST00000393860 IL16Q14005 1332 aa25.56■■□□□ 1.68
RAB5C-202ENST00000393860 TNS3Q68CZ2 1445 aa25.55■■□□□ 1.68
RAB5C-202ENST00000393860 DCTN1Q14203 1278 aa25.55■■□□□ 1.68
RAB5C-202ENST00000393860 C20orf194Q5TEA3 1177 aa25.55■■□□□ 1.68
RAB5C-202ENST00000393860 ARHGEF25Q86VW2 580 aa25.55■■□□□ 1.68
RAB5C-202ENST00000393860 PHRF1Q9P1Y6 1649 aaKnown RBP25.55■■□□□ 1.68
RAB5C-202ENST00000393860 KDRP35968 1356 aa25.55■■□□□ 1.68
RAB5C-202ENST00000393860 RGPD2P0DJD1 1756 aa25.54■■□□□ 1.68
RAB5C-202ENST00000393860 ZC3H6P61129 1189 aaKnown RBP25.53■■□□□ 1.68
RAB5C-202ENST00000393860 EXOSC9Q06265 439 aaKnown RBP25.53■■□□□ 1.68
RAB5C-202ENST00000393860 CABLES1Q8TDN4 633 aa25.53■■□□□ 1.68
RAB5C-202ENST00000393860 LMOD3Q0VAK6 560 aa25.51■■□□□ 1.67
RAB5C-202ENST00000393860 CRBNQ96SW2 442 aa25.51■■□□□ 1.67
RAB5C-202ENST00000393860 SPATA31A3Q5VYP0 1347 aa25.51■■□□□ 1.67
RAB5C-202ENST00000393860 MTHFSDQ2M296 383 aaKnown RBP25.5■■□□□ 1.67
RAB5C-202ENST00000393860 LRRC59Q96AG4 307 aaKnown RBP25.5■■□□□ 1.67
RAB5C-202ENST00000393860 BCL2L13Q9BXK5 485 aa25.5■■□□□ 1.67
RAB5C-202ENST00000393860 RGPD5Q99666 1765 aa25.5■■□□□ 1.67
RAB5C-202ENST00000393860 RARSP54136 660 aaKnown RBP25.49■■□□□ 1.67
RAB5C-202ENST00000393860 NBPF6Q5VWK0 638 aa25.49■■□□□ 1.67
RAB5C-202ENST00000393860 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.49■■□□□ 1.67
RAB5C-202ENST00000393860 NBPF4Q96M43 638 aa25.49■■□□□ 1.67
RAB5C-202ENST00000393860 MCM10Q7L590 875 aa25.47■■□□□ 1.67
RAB5C-202ENST00000393860 AXIN2Q9Y2T1 843 aa25.47■■□□□ 1.67
RAB5C-202ENST00000393860 CRYBG1Q9Y4K1 1723 aa25.47■■□□□ 1.67
RAB5C-202ENST00000393860 CALD1Q05682 793 aaKnown RBP25.46■■□□□ 1.67
RAB5C-202ENST00000393860 ANKRD24Q8TF21 1146 aa25.45■■□□□ 1.67
RAB5C-202ENST00000393860 FRAT1Q92837 279 aaPredicted RBP25.44■■□□□ 1.66
RAB5C-202ENST00000393860 IFT57Q9NWB7 429 aa25.44■■□□□ 1.66
RAB5C-202ENST00000393860 CANXP27824 592 aaKnown RBP25.43■■□□□ 1.66
RAB5C-202ENST00000393860 GNAI1P63096 354 aa25.43■■□□□ 1.66
RAB5C-202ENST00000393860 CCDC136Q96JN2 1154 aa25.43■■□□□ 1.66
RAB5C-202ENST00000393860 MBIPQ9NS73 344 aa25.43■■□□□ 1.66
RAB5C-202ENST00000393860 SOS2Q07890 1332 aaPredicted RBP25.43■■□□□ 1.66
RAB5C-202ENST00000393860 ZNF853P0CG23 659 aa25.42■■□□□ 1.66
RAB5C-202ENST00000393860 GAS2L2Q8NHY3 880 aa25.41■■□□□ 1.66
RAB5C-202ENST00000393860 CHRNA2Q15822 529 aa25.41■■□□□ 1.66
RAB5C-202ENST00000393860 NHSL1Q5SYE7 1610 aa25.41■■□□□ 1.66
RAB5C-202ENST00000393860 CFAP44Q96MT7 982 aa25.4■■□□□ 1.66
RAB5C-202ENST00000393860 LTBP4Q8N2S1 1624 aa25.4■■□□□ 1.66
RAB5C-202ENST00000393860 COL18A1P39060 1754 aa25.38■■□□□ 1.65
RAB5C-202ENST00000393860 CT47B1P0C2W7 299 aaPredicted RBP25.38■■□□□ 1.65
RAB5C-202ENST00000393860 PELP1Q8IZL8 1130 aaKnown RBP25.38■■□□□ 1.65
RAB5C-202ENST00000393860 RTF1Q92541 710 aaKnown RBP25.38■■□□□ 1.65
RAB5C-202ENST00000393860 TNNQ9UQP3 1299 aa25.38■■□□□ 1.65
RAB5C-202ENST00000393860 SMC4Q9NTJ3 1288 aa25.37■■□□□ 1.65
RAB5C-202ENST00000393860 KIAA0232Q92628 1395 aa25.37■■□□□ 1.65
RAB5C-202ENST00000393860 ELL2O00472 640 aaPredicted RBP25.36■■□□□ 1.65
RAB5C-202ENST00000393860 TSPYL6Q8N831 410 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms