RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 PSME1Q06323 249 aa28.81■■■□□ 2.2
HMGA2-203ENST00000393578 KIF24Q5T7B8 1368 aa28.81■■■□□ 2.2
HMGA2-203ENST00000393578 BCAR3O75815 825 aa28.8■■■□□ 2.2
HMGA2-203ENST00000393578 C20orf194Q5TEA3 1177 aa28.79■■■□□ 2.2
HMGA2-203ENST00000393578 CRBNQ96SW2 442 aa28.79■■■□□ 2.2
HMGA2-203ENST00000393578 RGPD1P0DJD0 1748 aa28.79■■■□□ 2.2
HMGA2-203ENST00000393578 NCOA3Q9Y6Q9 1424 aa28.79■■■□□ 2.2
HMGA2-203ENST00000393578 FANCIQ9NVI1 1328 aa28.78■■■□□ 2.2
HMGA2-203ENST00000393578 CT47B1P0C2W7 299 aaPredicted RBP28.77■■■□□ 2.2
HMGA2-203ENST00000393578 AMPHP49418 695 aa28.77■■■□□ 2.2
HMGA2-203ENST00000393578 NUTM2GQ5VZR2 741 aa28.77■■■□□ 2.2
HMGA2-203ENST00000393578 ORAI2Q96SN7 254 aa28.77■■■□□ 2.2
HMGA2-203ENST00000393578 RARSP54136 660 aaKnown RBP28.76■■■□□ 2.19
HMGA2-203ENST00000393578 SULT6B1Q6IMI4 303 aa28.76■■■□□ 2.19
HMGA2-203ENST00000393578 STRCQ7RTU9 1775 aa28.75■■■□□ 2.19
HMGA2-203ENST00000393578 TSHZ2Q9NRE2 1034 aa28.75■■■□□ 2.19
HMGA2-203ENST00000393578 TMEM94Q12767 1356 aa28.75■■■□□ 2.19
HMGA2-203ENST00000393578 CALD1Q05682 793 aaKnown RBP28.74■■■□□ 2.19
HMGA2-203ENST00000393578 ARHGEF10O15013 1369 aa28.74■■■□□ 2.19
HMGA2-203ENST00000393578 C1orf167Q5SNV9 1468 aa28.74■■■□□ 2.19
HMGA2-203ENST00000393578 LMOD3Q0VAK6 560 aa28.73■■■□□ 2.19
HMGA2-203ENST00000393578 TSR2Q969E8 191 aaKnown RBP28.73■■■□□ 2.19
HMGA2-203ENST00000393578 DCCP43146 1447 aa28.73■■■□□ 2.19
HMGA2-203ENST00000393578 AEBP1Q8IUX7 1158 aa28.73■■■□□ 2.19
HMGA2-203ENST00000393578 KIF1AQ12756 1690 aa28.72■■■□□ 2.19
HMGA2-203ENST00000393578 FOXO3O43524 673 aa28.71■■■□□ 2.19
HMGA2-203ENST00000393578 ATF3P18847 181 aa28.7■■■□□ 2.18
HMGA2-203ENST00000393578 PDE3AQ14432 1141 aa28.7■■■□□ 2.18
HMGA2-203ENST00000393578 HOXC9P31274 260 aa28.69■■■□□ 2.18
HMGA2-203ENST00000393578 EXOSC9Q06265 439 aaKnown RBP28.69■■■□□ 2.18
HMGA2-203ENST00000393578 RTL1A6NKG5 1358 aa28.69■■■□□ 2.18
HMGA2-203ENST00000393578 DLG5Q8TDM6 1919 aa28.68■■■□□ 2.18
HMGA2-203ENST00000393578 KDRP35968 1356 aa28.67■■■□□ 2.18
HMGA2-203ENST00000393578 KCNH5Q8NCM2 988 aa28.67■■■□□ 2.18
HMGA2-203ENST00000393578 NFAT5O94916 1531 aa28.67■■■□□ 2.18
HMGA2-203ENST00000393578 IGSF1Q8N6C5 1336 aa28.66■■■□□ 2.18
HMGA2-203ENST00000393578 MST1RQ04912 1400 aa28.66■■■□□ 2.18
HMGA2-203ENST00000393578 CANXP27824 592 aaKnown RBP28.66■■■□□ 2.18
HMGA2-203ENST00000393578 IFT57Q9NWB7 429 aa28.64■■■□□ 2.18
HMGA2-203ENST00000393578 GNAI1P63096 354 aa28.64■■■□□ 2.17
HMGA2-203ENST00000393578 EYA1Q99502 592 aa28.64■■■□□ 2.17
HMGA2-203ENST00000393578 TRPM3Q9HCF6 1732 aaPredicted RBP28.63■■■□□ 2.17
HMGA2-203ENST00000393578 LTN1O94822 1766 aa28.63■■■□□ 2.17
HMGA2-203ENST00000393578 KRT28Q7Z3Y7 464 aa28.62■■■□□ 2.17
HMGA2-203ENST00000393578 CADPS2Q86UW7 1296 aa28.62■■■□□ 2.17
HMGA2-203ENST00000393578 THUMPD2Q9BTF0 503 aaKnown RBP28.62■■■□□ 2.17
HMGA2-203ENST00000393578 ZNF853P0CG23 659 aa28.61■■■□□ 2.17
HMGA2-203ENST00000393578 XPCQ01831 940 aaPredicted RBP28.61■■■□□ 2.17
HMGA2-203ENST00000393578 FRAT1Q92837 279 aaPredicted RBP28.61■■■□□ 2.17
HMGA2-203ENST00000393578 XIRP1Q702N8 1843 aaKnown RBP28.61■■■□□ 2.17
HMGA2-203ENST00000393578 IP6K1Q92551 441 aa28.6■■■□□ 2.17
HMGA2-203ENST00000393578 PHRF1Q9P1Y6 1649 aaKnown RBP28.59■■■□□ 2.17
HMGA2-203ENST00000393578 LAS1LQ9Y4W2 734 aaKnown RBP28.59■■■□□ 2.17
HMGA2-203ENST00000393578 SLIT3O75094 1523 aa28.59■■■□□ 2.17
HMGA2-203ENST00000393578 CFAP44Q96MT7 982 aa28.59■■■□□ 2.17
HMGA2-203ENST00000393578 BCL2L13Q9BXK5 485 aa28.59■■■□□ 2.17
HMGA2-203ENST00000393578 MSH6P52701 1360 aa28.58■■■□□ 2.17
HMGA2-203ENST00000393578 FAM83GA6ND36 823 aa28.57■■■□□ 2.16
HMGA2-203ENST00000393578 ZNF428Q96B54 188 aa28.57■■■□□ 2.16
HMGA2-203ENST00000393578 USP19O94966 1318 aa28.56■■■□□ 2.16
HMGA2-203ENST00000393578 GCP02774 474 aa28.55■■■□□ 2.16
HMGA2-203ENST00000393578 SMC4Q9NTJ3 1288 aa28.55■■■□□ 2.16
HMGA2-203ENST00000393578 PANK1Q8TE04 598 aa28.54■■■□□ 2.16
HMGA2-203ENST00000393578 SSH1Q8WYL5 1049 aa28.54■■■□□ 2.16
HMGA2-203ENST00000393578 MBIPQ9NS73 344 aa28.54■■■□□ 2.16
HMGA2-203ENST00000393578 LMOD2Q6P5Q4 547 aa28.53■■■□□ 2.16
HMGA2-203ENST00000393578 DCTN1Q14203 1278 aa28.53■■■□□ 2.16
HMGA2-203ENST00000393578 ALDH1L2Q3SY69 923 aa28.53■■■□□ 2.16
HMGA2-203ENST00000393578 ZKSCAN2Q63HK3 967 aa28.52■■■□□ 2.16
HMGA2-203ENST00000393578 ALS2Q96Q42 1657 aa28.52■■■□□ 2.16
HMGA2-203ENST00000393578 MTHFSDQ2M296 383 aaKnown RBP28.51■■■□□ 2.16
HMGA2-203ENST00000393578 GAS2L2Q8NHY3 880 aa28.51■■■□□ 2.16
HMGA2-203ENST00000393578 LTV1Q96GA3 475 aaPredicted RBP28.51■■■□□ 2.16
HMGA2-203ENST00000393578 MS4A1P11836 297 aa28.51■■■□□ 2.15
HMGA2-203ENST00000393578 ARHGEF25Q86VW2 580 aa28.51■■■□□ 2.15
HMGA2-203ENST00000393578 AAMPQ13685 434 aa28.5■■■□□ 2.15
HMGA2-203ENST00000393578 COG6Q9Y2V7 657 aa28.5■■■□□ 2.15
HMGA2-203ENST00000393578 NPHP3Q7Z494 1330 aa28.49■■■□□ 2.15
HMGA2-203ENST00000393578 KDM2BQ8NHM5 1336 aa28.48■■■□□ 2.15
HMGA2-203ENST00000393578 RLBP1P12271 317 aa28.48■■■□□ 2.15
HMGA2-203ENST00000393578 MCM10Q7L590 875 aa28.48■■■□□ 2.15
HMGA2-203ENST00000393578 KIF16BQ96L93 1317 aa28.47■■■□□ 2.15
HMGA2-203ENST00000393578 VAMP4O75379 141 aa28.47■■■□□ 2.15
HMGA2-203ENST00000393578 BRPF1P55201 1214 aaPredicted RBP28.47■■■□□ 2.15
HMGA2-203ENST00000393578 CENPQQ7L2Z9 268 aaPredicted RBP28.46■■■□□ 2.15
HMGA2-203ENST00000393578 HTATSF1O43719 755 aaKnown RBP28.46■■■□□ 2.15
HMGA2-203ENST00000393578 RTF1Q92541 710 aaKnown RBP28.46■■■□□ 2.15
HMGA2-203ENST00000393578 ZNF335Q9H4Z2 1342 aaPredicted RBP28.45■■■□□ 2.15
HMGA2-203ENST00000393578 CHL1O00533 1208 aa28.45■■■□□ 2.14
HMGA2-203ENST00000393578 ZBTB7CA1YPR0 619 aa28.44■■■□□ 2.14
HMGA2-203ENST00000393578 DZIP1LQ8IYY4 767 aaKnown RBP28.44■■■□□ 2.14
HMGA2-203ENST00000393578 CLUAP1Q96AJ1 413 aa28.44■■■□□ 2.14
HMGA2-203ENST00000393578 TNNQ9UQP3 1299 aa28.44■■■□□ 2.14
HMGA2-203ENST00000393578 IPO8O15397 1037 aaKnown RBP28.44■■■□□ 2.14
HMGA2-203ENST00000393578 ATF7IPQ6VMQ6 1270 aa28.44■■■□□ 2.14
HMGA2-203ENST00000393578 FTSJ3Q8IY81 847 aaKnown RBP28.44■■■□□ 2.14
HMGA2-203ENST00000393578 CRB1P82279 1406 aa28.44■■■□□ 2.14
HMGA2-203ENST00000393578 TSPYL6Q8N831 410 aa28.43■■■□□ 2.14
HMGA2-203ENST00000393578 TWISTNBQ3B726 338 aaPredicted RBP28.42■■■□□ 2.14
HMGA2-203ENST00000393578 NOB1Q9ULX3 412 aaKnown RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms