RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 CDK15Q96Q40 435 aa6.44□□□□□ -1.38
RNU6-278P-201ENST00000390945 VRTNQ9H8Y1 702 aa6.44□□□□□ -1.38
RNU6-278P-201ENST00000390945 ZBTB24O43167 697 aaPredicted RBP6.43□□□□□ -1.38
RNU6-278P-201ENST00000390945 SKIP12755 728 aa6.43□□□□□ -1.38
RNU6-278P-201ENST00000390945 PDIA4P13667 645 aaKnown RBP6.43□□□□□ -1.38
RNU6-278P-201ENST00000390945 VARSP26640 1264 aaKnown RBP6.43□□□□□ -1.38
RNU6-278P-201ENST00000390945 SLFNL1Q499Z3 407 aa6.43□□□□□ -1.38
RNU6-278P-201ENST00000390945 DZIP3Q86Y13 1208 aaKnown RBP6.43□□□□□ -1.38
RNU6-278P-201ENST00000390945 CCDC125Q86Z20 511 aa6.43□□□□□ -1.38
RNU6-278P-201ENST00000390945 CCDC85AQ96PX6 553 aaPredicted RBP6.43□□□□□ -1.38
RNU6-278P-201ENST00000390945 USP17L3A6NCW0 530 aa6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 USP17L4A6NCW7 530 aa6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 USP17L5A8MUK1 530 aa6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 ZBTB7BO15156 539 aaPredicted RBP6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 DKK1O94907 266 aa6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 CD2BP2O95400 341 aaKnown RBP6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 USP17L2Q6R6M4 530 aa6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 USP17L1Q7RTZ2 530 aa6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 SEPT12Q8IYM1 358 aa6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 PLPP7Q8NBV4 271 aa6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 CDV3Q9UKY7 258 aaKnown RBP6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 MAP4K5Q9Y4K4 846 aa6.42□□□□□ -1.38
RNU6-278P-201ENST00000390945 MAGEB6P1A0A0J9YX57 407 aa6.41□□□□□ -1.38
RNU6-278P-201ENST00000390945 TMEM88BA6NKF7 163 aa6.41□□□□□ -1.38
RNU6-278P-201ENST00000390945 GRM5P41594 1212 aa6.41□□□□□ -1.38
RNU6-278P-201ENST00000390945 CDCA8Q53HL2 280 aa6.41□□□□□ -1.38
RNU6-278P-201ENST00000390945 RNF135Q8IUD6 432 aa6.41□□□□□ -1.38
RNU6-278P-201ENST00000390945 MKRN1Q9UHC7 482 aaKnown RBP6.41□□□□□ -1.38
RNU6-278P-201ENST00000390945 PDE4CQ08493 712 aa6.4□□□□□ -1.38
RNU6-278P-201ENST00000390945 TRIM26Q12899 539 aaPredicted RBP6.4□□□□□ -1.38
RNU6-278P-201ENST00000390945 RC3H1Q5TC82 1133 aaKnown RBP6.4□□□□□ -1.38
RNU6-278P-201ENST00000390945 RNF20Q5VTR2 975 aa6.4□□□□□ -1.38
RNU6-278P-201ENST00000390945 CARD14Q9BXL6 1004 aa6.4□□□□□ -1.38
RNU6-278P-201ENST00000390945 USTQ9Y2C2 406 aa6.4□□□□□ -1.38
RNU6-278P-201ENST00000390945 FAM196BA6NMK8 535 aa6.39□□□□□ -1.39
RNU6-278P-201ENST00000390945 PTK7Q13308 1070 aa6.39□□□□□ -1.39
RNU6-278P-201ENST00000390945 NCOA4Q13772 614 aa6.39□□□□□ -1.39
RNU6-278P-201ENST00000390945 AGERQ15109 404 aa6.39□□□□□ -1.39
RNU6-278P-201ENST00000390945 DEPDC4Q8N2C3 294 aa6.39□□□□□ -1.39
RNU6-278P-201ENST00000390945 CDCA7Q9BWT1 371 aaPredicted RBP6.39□□□□□ -1.39
RNU6-278P-201ENST00000390945 ATP5J2-PTCD1G3V325 749 aa6.38□□□□□ -1.39
RNU6-278P-201ENST00000390945 SLC19A1P41440 591 aa6.38□□□□□ -1.39
RNU6-278P-201ENST00000390945 FAM69CQ0P6D2 419 aa6.38□□□□□ -1.39
RNU6-278P-201ENST00000390945 CRTC2Q53ET0 693 aaPredicted RBP6.38□□□□□ -1.39
RNU6-278P-201ENST00000390945 SPRYD7Q5W111 196 aa6.38□□□□□ -1.39
RNU6-278P-201ENST00000390945 KCTD15Q96SI1 283 aaPredicted RBP6.38□□□□□ -1.39
RNU6-278P-201ENST00000390945 ZMIZ1Q9ULJ6 1067 aa6.38□□□□□ -1.39
RNU6-278P-201ENST00000390945 PCDHGA11Q9Y5H2 935 aa6.38□□□□□ -1.39
RNU6-278P-201ENST00000390945 WNT7AO00755 349 aa6.37□□□□□ -1.39
RNU6-278P-201ENST00000390945 NBPF20Q3BBV1 942 aa6.37□□□□□ -1.39
RNU6-278P-201ENST00000390945 SLC10A4Q96EP9 437 aa6.37□□□□□ -1.39
RNU6-278P-201ENST00000390945 CLDN10P78369 228 aa6.36□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP4Q13107 963 aa6.36□□□□□ -1.39
RNU6-278P-201ENST00000390945 EML3Q32P44 896 aa6.36□□□□□ -1.39
RNU6-278P-201ENST00000390945 INTS6LQ5JSJ4 861 aaKnown RBP6.36□□□□□ -1.39
RNU6-278P-201ENST00000390945 LARGE2Q8N3Y3 721 aa6.36□□□□□ -1.39
RNU6-278P-201ENST00000390945 A0A0G2JS52 829 aa6.35□□□□□ -1.39
RNU6-278P-201ENST00000390945 CARNS1A5YM72 827 aa6.35□□□□□ -1.39
RNU6-278P-201ENST00000390945 CSB-PGBD3P0DP91 1061 aa6.35□□□□□ -1.39
RNU6-278P-201ENST00000390945 ZNF598Q86UK7 904 aaKnown RBP6.35□□□□□ -1.39
RNU6-278P-201ENST00000390945 KCTD17Q8N5Z5 321 aa6.35□□□□□ -1.39
RNU6-278P-201ENST00000390945 SLAIN2Q9P270 581 aa6.35□□□□□ -1.39
RNU6-278P-201ENST00000390945 NOD1Q9Y239 953 aa6.35□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L15C9J2P7 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L10C9JJH3 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L13C9JLJ4 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L12C9JPN9 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L11C9JVI0 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L21D6R901 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L18D6R9N7 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L22D6RA61 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L17D6RBQ6 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L19D6RCP7 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L20D6RJB6 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 ERVH48-1M5A8F1 160 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 BRD1O95696 1058 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 RASA1P20936 1047 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 USP17L24Q0WX57 530 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 TMEM164Q5U3C3 297 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 TRIM50Q86XT4 487 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 ANKMY2Q8IV38 441 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 SIX5Q8N196 739 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 OGFOD1Q8N543 542 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 EHBP1Q8NDI1 1231 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 PKD2L1Q9P0L9 805 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 DOLKQ9UPQ8 538 aa6.34□□□□□ -1.39
RNU6-278P-201ENST00000390945 ERVK-9P63128 1117 aa6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 PHLDB3Q6NSJ2 640 aa6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 LARP1Q6PKG0 1096 aaKnown RBP6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 VASH1Q7L8A9 365 aaPredicted RBP6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 STK32AQ8WU08 396 aa6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 SIRT1Q96EB6 747 aa6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 MRGPRX2Q96LB1 330 aa6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 DNAAF2Q9NVR5 837 aaKnown RBP6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 PLA2G2EQ9NZK7 142 aa6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 NOVA2Q9UNW9 492 aaKnown RBP6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 KIAA1024Q9UPX6 916 aa6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 V9GY48 417 aaPredicted RBP6.33□□□□□ -1.4
RNU6-278P-201ENST00000390945 LILRA1O75019 489 aa6.32□□□□□ -1.4
RNU6-278P-201ENST00000390945 ATP1A2P50993 1020 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms