RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.35
ACTN4-202ENST00000390009 HSP90AB2PQ58FF8 381 aa23.45■■□□□ 1.35
ACTN4-202ENST00000390009 RBM33Q96EV2 1170 aaKnown RBP23.45■■□□□ 1.35
ACTN4-202ENST00000390009 TCERG1O14776 1098 aaKnown RBP23.45■■□□□ 1.34
ACTN4-202ENST00000390009 COG6Q9Y2V7 657 aa23.45■■□□□ 1.34
ACTN4-202ENST00000390009 USP54Q70EL1 1684 aa23.45■■□□□ 1.34
ACTN4-202ENST00000390009 MAP3K19Q56UN5 1328 aa23.44■■□□□ 1.34
ACTN4-202ENST00000390009 CALD1Q05682 793 aaKnown RBP23.42■■□□□ 1.34
ACTN4-202ENST00000390009 SULT6B1Q6IMI4 303 aa23.42■■□□□ 1.34
ACTN4-202ENST00000390009 AEBP1Q8IUX7 1158 aa23.42■■□□□ 1.34
ACTN4-202ENST00000390009 ANP32EQ9BTT0 268 aa23.42■■□□□ 1.34
ACTN4-202ENST00000390009 SBNO1A3KN83 1393 aa23.42■■□□□ 1.34
ACTN4-202ENST00000390009 NLRP6P59044 892 aa23.42■■□□□ 1.34
ACTN4-202ENST00000390009 LMOD3Q0VAK6 560 aa23.41■■□□□ 1.34
ACTN4-202ENST00000390009 THUMPD2Q9BTF0 503 aaKnown RBP23.41■■□□□ 1.34
ACTN4-202ENST00000390009 PHF8Q9UPP1 1060 aa23.41■■□□□ 1.34
ACTN4-202ENST00000390009 TNNQ9UQP3 1299 aa23.41■■□□□ 1.34
ACTN4-202ENST00000390009 FLT4P35916 1363 aa23.41■■□□□ 1.34
ACTN4-202ENST00000390009 SMC4Q9NTJ3 1288 aa23.41■■□□□ 1.34
ACTN4-202ENST00000390009 NWD1Q149M9 1564 aa23.4■■□□□ 1.34
ACTN4-202ENST00000390009 RLBP1P12271 317 aa23.4■■□□□ 1.34
ACTN4-202ENST00000390009 CLUAP1Q96AJ1 413 aa23.39■■□□□ 1.34
ACTN4-202ENST00000390009 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.34
ACTN4-202ENST00000390009 ZKSCAN2Q63HK3 967 aa23.39■■□□□ 1.33
ACTN4-202ENST00000390009 SSH1Q8WYL5 1049 aa23.39■■□□□ 1.33
ACTN4-202ENST00000390009 ABTB2Q8N961 1025 aa23.38■■□□□ 1.33
ACTN4-202ENST00000390009 IFT57Q9NWB7 429 aa23.38■■□□□ 1.33
ACTN4-202ENST00000390009 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
ACTN4-202ENST00000390009 MS4A1P11836 297 aa23.37■■□□□ 1.33
ACTN4-202ENST00000390009 GNAI1P63096 354 aa23.37■■□□□ 1.33
ACTN4-202ENST00000390009 ARHGEF10O15013 1369 aa23.37■■□□□ 1.33
ACTN4-202ENST00000390009 NUTM2GQ5VZR2 741 aa23.36■■□□□ 1.33
ACTN4-202ENST00000390009 SKAP1Q86WV1 359 aa23.36■■□□□ 1.33
ACTN4-202ENST00000390009 AMPHP49418 695 aa23.36■■□□□ 1.33
ACTN4-202ENST00000390009 AAMPQ13685 434 aa23.36■■□□□ 1.33
ACTN4-202ENST00000390009 ZNF853P0CG23 659 aa23.35■■□□□ 1.33
ACTN4-202ENST00000390009 C14orf37Q86TY3 774 aa23.35■■□□□ 1.33
ACTN4-202ENST00000390009 FAM83GA6ND36 823 aa23.34■■□□□ 1.33
ACTN4-202ENST00000390009 ESCO1Q5FWF5 840 aa23.33■■□□□ 1.33
ACTN4-202ENST00000390009 DZIP1LQ8IYY4 767 aaKnown RBP23.33■■□□□ 1.33
ACTN4-202ENST00000390009 KIF24Q5T7B8 1368 aa23.33■■□□□ 1.33
ACTN4-202ENST00000390009 ALDH1L2Q3SY69 923 aa23.33■■□□□ 1.32
ACTN4-202ENST00000390009 FTSJ3Q8IY81 847 aaKnown RBP23.33■■□□□ 1.32
ACTN4-202ENST00000390009 CFAP44Q96MT7 982 aa23.33■■□□□ 1.32
ACTN4-202ENST00000390009 MBIPQ9NS73 344 aa23.33■■□□□ 1.32
ACTN4-202ENST00000390009 ZNF428Q96B54 188 aa23.32■■□□□ 1.32
ACTN4-202ENST00000390009 TRIM27P14373 513 aa23.32■■□□□ 1.32
ACTN4-202ENST00000390009 MVPQ14764 893 aaKnown RBP23.32■■□□□ 1.32
ACTN4-202ENST00000390009 IGHDP01880 384 aa23.31■■□□□ 1.32
ACTN4-202ENST00000390009 DCTN1Q14203 1278 aa23.31■■□□□ 1.32
ACTN4-202ENST00000390009 KIF16BQ96L93 1317 aa23.31■■□□□ 1.32
ACTN4-202ENST00000390009 LTN1O94822 1766 aa23.31■■□□□ 1.32
ACTN4-202ENST00000390009 KDRP35968 1356 aa23.31■■□□□ 1.32
ACTN4-202ENST00000390009 ATF7IPQ6VMQ6 1270 aa23.3■■□□□ 1.32
ACTN4-202ENST00000390009 NOB1Q9ULX3 412 aaKnown RBP23.3■■□□□ 1.32
ACTN4-202ENST00000390009 IGSF1Q8N6C5 1336 aa23.3■■□□□ 1.32
ACTN4-202ENST00000390009 HOXC9P31274 260 aa23.29■■□□□ 1.32
ACTN4-202ENST00000390009 PDE4AP27815 886 aa23.29■■□□□ 1.32
ACTN4-202ENST00000390009 PSME1Q06323 249 aa23.29■■□□□ 1.32
ACTN4-202ENST00000390009 EYA1Q99502 592 aa23.29■■□□□ 1.32
ACTN4-202ENST00000390009 VAMP4O75379 141 aa23.28■■□□□ 1.32
ACTN4-202ENST00000390009 TSPYL6Q8N831 410 aa23.27■■□□□ 1.32
ACTN4-202ENST00000390009 IPO8O15397 1037 aaKnown RBP23.27■■□□□ 1.32
ACTN4-202ENST00000390009 PROSER2Q86WR7 435 aaPredicted RBP23.27■■□□□ 1.32
ACTN4-202ENST00000390009 BRPF1P55201 1214 aaPredicted RBP23.26■■□□□ 1.31
ACTN4-202ENST00000390009 BACH2Q9BYV9 841 aa23.26■■□□□ 1.31
ACTN4-202ENST00000390009 PCDHB15Q9Y5E8 787 aa23.26■■□□□ 1.31
ACTN4-202ENST00000390009 ORAI2Q96SN7 254 aa23.25■■□□□ 1.31
ACTN4-202ENST00000390009 NFAT5O94916 1531 aa23.25■■□□□ 1.31
ACTN4-202ENST00000390009 RTL1A6NKG5 1358 aa23.24■■□□□ 1.31
ACTN4-202ENST00000390009 TWISTNBQ3B726 338 aaPredicted RBP23.24■■□□□ 1.31
ACTN4-202ENST00000390009 MCM10Q7L590 875 aa23.24■■□□□ 1.31
ACTN4-202ENST00000390009 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
ACTN4-202ENST00000390009 MTHFSDQ2M296 383 aaKnown RBP23.23■■□□□ 1.31
ACTN4-202ENST00000390009 C8orf58Q8NAV2 365 aa23.23■■□□□ 1.31
ACTN4-202ENST00000390009 DDX19BQ9UMR2 479 aa23.23■■□□□ 1.31
ACTN4-202ENST00000390009 MSH5O43196 834 aa23.22■■□□□ 1.31
ACTN4-202ENST00000390009 ITPRIPQ8IWB1 547 aa23.22■■□□□ 1.31
ACTN4-202ENST00000390009 MRPL50Q8N5N7 158 aaKnown RBP23.21■■□□□ 1.31
ACTN4-202ENST00000390009 FOXO3O43524 673 aa23.21■■□□□ 1.31
ACTN4-202ENST00000390009 STRCP1A6NGW2 1772 aa23.2■■□□□ 1.31
ACTN4-202ENST00000390009 RGS3P49796 1198 aa23.2■■□□□ 1.3
ACTN4-202ENST00000390009 TMEM57Q8N5G2 664 aa23.2■■□□□ 1.3
ACTN4-202ENST00000390009 KIF1AQ12756 1690 aa23.2■■□□□ 1.3
ACTN4-202ENST00000390009 CHL1O00533 1208 aa23.2■■□□□ 1.3
ACTN4-202ENST00000390009 C19orf44Q9H6X5 657 aa23.2■■□□□ 1.3
ACTN4-202ENST00000390009 GAS2L2Q8NHY3 880 aa23.19■■□□□ 1.3
ACTN4-202ENST00000390009 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
ACTN4-202ENST00000390009 CRB1P82279 1406 aa23.19■■□□□ 1.3
ACTN4-202ENST00000390009 PHRF1Q9P1Y6 1649 aaKnown RBP23.19■■□□□ 1.3
ACTN4-202ENST00000390009 KCNH5Q8NCM2 988 aa23.18■■□□□ 1.3
ACTN4-202ENST00000390009 LTV1Q96GA3 475 aaPredicted RBP23.18■■□□□ 1.3
ACTN4-202ENST00000390009 C1orf167Q5SNV9 1468 aa23.18■■□□□ 1.3
ACTN4-202ENST00000390009 XPCQ01831 940 aaPredicted RBP23.17■■□□□ 1.3
ACTN4-202ENST00000390009 RTF1Q92541 710 aaKnown RBP23.17■■□□□ 1.3
ACTN4-202ENST00000390009 IP6K1Q92551 441 aa23.17■■□□□ 1.3
ACTN4-202ENST00000390009 ARHGAP45Q92619 1136 aa23.17■■□□□ 1.3
ACTN4-202ENST00000390009 RWDD1Q9H446 243 aaPredicted RBP23.17■■□□□ 1.3
ACTN4-202ENST00000390009 ANP32AP39687 249 aaKnown RBP23.16■■□□□ 1.3
ACTN4-202ENST00000390009 SLIT3O75094 1523 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms