RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 TNS3Q68CZ2 1445 aa25.86■■□□□ 1.73
CCM2-202ENST00000381112 HMOX1P09601 288 aa25.86■■□□□ 1.73
CCM2-202ENST00000381112 MAPK8IP3Q9UPT6 1336 aa25.86■■□□□ 1.73
CCM2-202ENST00000381112 PRKAR2BP31323 418 aa25.85■■□□□ 1.73
CCM2-202ENST00000381112 GOLGA2Q08379 1002 aa25.85■■□□□ 1.73
CCM2-202ENST00000381112 CCDC27Q2M243 656 aa25.85■■□□□ 1.73
CCM2-202ENST00000381112 WWC1Q8IX03 1113 aa25.85■■□□□ 1.73
CCM2-202ENST00000381112 SPATA31A3Q5VYP0 1347 aa25.85■■□□□ 1.73
CCM2-202ENST00000381112 NEUROD2Q15784 382 aa25.83■■□□□ 1.73
CCM2-202ENST00000381112 SOS2Q07890 1332 aaPredicted RBP25.83■■□□□ 1.72
CCM2-202ENST00000381112 TMPOP42166 694 aaKnown RBP25.83■■□□□ 1.72
CCM2-202ENST00000381112 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.72
CCM2-202ENST00000381112 IP6K1Q92551 441 aa25.82■■□□□ 1.72
CCM2-202ENST00000381112 ARHGEF25Q86VW2 580 aa25.81■■□□□ 1.72
CCM2-202ENST00000381112 RGPD1P0DJD0 1748 aa25.81■■□□□ 1.72
CCM2-202ENST00000381112 MED1Q15648 1581 aaPredicted RBP25.81■■□□□ 1.72
CCM2-202ENST00000381112 ARHGEF10O15013 1369 aa25.8■■□□□ 1.72
CCM2-202ENST00000381112 SLFN5Q08AF3 891 aa25.8■■□□□ 1.72
CCM2-202ENST00000381112 SULT6B1Q6IMI4 303 aa25.79■■□□□ 1.72
CCM2-202ENST00000381112 PHACTR3Q96KR7 559 aa25.79■■□□□ 1.72
CCM2-202ENST00000381112 PHRF1Q9P1Y6 1649 aaKnown RBP25.79■■□□□ 1.72
CCM2-202ENST00000381112 AEBP1Q8IUX7 1158 aa25.79■■□□□ 1.72
CCM2-202ENST00000381112 TRMT2AQ8IZ69 625 aaKnown RBP25.79■■□□□ 1.72
CCM2-202ENST00000381112 PLEKHG5O94827 1062 aa25.78■■□□□ 1.72
CCM2-202ENST00000381112 NEFMP07197 916 aa25.78■■□□□ 1.72
CCM2-202ENST00000381112 DUSP27Q5VZP5 1158 aa25.78■■□□□ 1.72
CCM2-202ENST00000381112 SPINK5Q9NQ38 1064 aaPredicted RBP25.78■■□□□ 1.72
CCM2-202ENST00000381112 IGSF1Q8N6C5 1336 aa25.77■■□□□ 1.72
CCM2-202ENST00000381112 LTN1O94822 1766 aa25.77■■□□□ 1.72
CCM2-202ENST00000381112 E9PSI1 815 aa25.77■■□□□ 1.72
CCM2-202ENST00000381112 WDR63Q8IWG1 891 aa25.77■■□□□ 1.72
CCM2-202ENST00000381112 EYA1Q99502 592 aa25.77■■□□□ 1.72
CCM2-202ENST00000381112 TRIM35Q9UPQ4 493 aa25.76■■□□□ 1.71
CCM2-202ENST00000381112 KDRP35968 1356 aa25.75■■□□□ 1.71
CCM2-202ENST00000381112 RIPK4P57078 832 aa25.74■■□□□ 1.71
CCM2-202ENST00000381112 NFE2L2Q16236 605 aa25.74■■□□□ 1.71
CCM2-202ENST00000381112 ZBTB7CA1YPR0 619 aa25.72■■□□□ 1.71
CCM2-202ENST00000381112 NHSL1Q5SYE7 1610 aa25.72■■□□□ 1.71
CCM2-202ENST00000381112 CABLES1Q8TDN4 633 aa25.72■■□□□ 1.71
CCM2-202ENST00000381112 LTV1Q96GA3 475 aaPredicted RBP25.72■■□□□ 1.71
CCM2-202ENST00000381112 ZC3H6P61129 1189 aaKnown RBP25.7■■□□□ 1.71
CCM2-202ENST00000381112 NEFLP07196 543 aa25.7■■□□□ 1.7
CCM2-202ENST00000381112 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
CCM2-202ENST00000381112 RNF123Q5XPI4 1314 aa25.7■■□□□ 1.7
CCM2-202ENST00000381112 RCAN3Q9UKA8 241 aa25.69■■□□□ 1.7
CCM2-202ENST00000381112 CRYBG1Q9Y4K1 1723 aa25.68■■□□□ 1.7
CCM2-202ENST00000381112 AXIN2Q9Y2T1 843 aa25.67■■□□□ 1.7
CCM2-202ENST00000381112 CPDO75976 1380 aa25.66■■□□□ 1.7
CCM2-202ENST00000381112 FKBP8Q14318 412 aa25.66■■□□□ 1.7
CCM2-202ENST00000381112 IL16Q14005 1332 aa25.65■■□□□ 1.7
CCM2-202ENST00000381112 ROBO1Q9Y6N7 1651 aa25.65■■□□□ 1.7
CCM2-202ENST00000381112 NBPF6Q5VWK0 638 aa25.64■■□□□ 1.69
CCM2-202ENST00000381112 ANKRD24Q8TF21 1146 aa25.64■■□□□ 1.69
CCM2-202ENST00000381112 NBPF4Q96M43 638 aa25.64■■□□□ 1.69
CCM2-202ENST00000381112 LMOD3Q0VAK6 560 aa25.62■■□□□ 1.69
CCM2-202ENST00000381112 MYH16Q9H6N6 1097 aa25.62■■□□□ 1.69
CCM2-202ENST00000381112 AHDC1Q5TGY3 1603 aaPredicted RBP25.62■■□□□ 1.69
CCM2-202ENST00000381112 KIAA0232Q92628 1395 aa25.61■■□□□ 1.69
CCM2-202ENST00000381112 ABCC6O95255 1503 aa25.61■■□□□ 1.69
CCM2-202ENST00000381112 USHBP1Q8N6Y0 703 aa25.6■■□□□ 1.69
CCM2-202ENST00000381112 LRRC59Q96AG4 307 aaKnown RBP25.6■■□□□ 1.69
CCM2-202ENST00000381112 ERBB3P21860 1342 aa25.6■■□□□ 1.69
CCM2-202ENST00000381112 NCAPD2Q15021 1401 aa25.6■■□□□ 1.69
CCM2-202ENST00000381112 COL18A1P39060 1754 aa25.59■■□□□ 1.69
CCM2-202ENST00000381112 TOM1O60784 492 aa25.58■■□□□ 1.69
CCM2-202ENST00000381112 MTHFSDQ2M296 383 aaKnown RBP25.58■■□□□ 1.69
CCM2-202ENST00000381112 CALD1Q05682 793 aaKnown RBP25.57■■□□□ 1.68
CCM2-202ENST00000381112 CHRNA2Q15822 529 aa25.57■■□□□ 1.68
CCM2-202ENST00000381112 THUMPD2Q9BTF0 503 aaKnown RBP25.57■■□□□ 1.68
CCM2-202ENST00000381112 IRX6P78412 446 aaPredicted RBP25.56■■□□□ 1.68
CCM2-202ENST00000381112 FANCIQ9NVI1 1328 aa25.56■■□□□ 1.68
CCM2-202ENST00000381112 RRP1P56182 461 aaKnown RBP25.55■■□□□ 1.68
CCM2-202ENST00000381112 GAS2L2Q8NHY3 880 aa25.55■■□□□ 1.68
CCM2-202ENST00000381112 FAM83GA6ND36 823 aa25.55■■□□□ 1.68
CCM2-202ENST00000381112 HAP1P54257 671 aaPredicted RBP25.53■■□□□ 1.68
CCM2-202ENST00000381112 TSR2Q969E8 191 aaKnown RBP25.53■■□□□ 1.68
CCM2-202ENST00000381112 PRDM11Q9NQV5 511 aa25.53■■□□□ 1.68
CCM2-202ENST00000381112 CAMTA1Q9Y6Y1 1673 aa25.53■■□□□ 1.68
CCM2-202ENST00000381112 ABCA3Q99758 1704 aa25.53■■□□□ 1.68
CCM2-202ENST00000381112 DCTN1Q14203 1278 aa25.52■■□□□ 1.68
CCM2-202ENST00000381112 DLG5Q8TDM6 1919 aa25.52■■□□□ 1.68
CCM2-202ENST00000381112 ZNF853P0CG23 659 aa25.51■■□□□ 1.67
CCM2-202ENST00000381112 IFT57Q9NWB7 429 aa25.51■■□□□ 1.67
CCM2-202ENST00000381112 LMO7Q8WWI1 1683 aa25.51■■□□□ 1.67
CCM2-202ENST00000381112 RGPD5Q99666 1765 aa25.5■■□□□ 1.67
CCM2-202ENST00000381112 RGPD2P0DJD1 1756 aa25.5■■□□□ 1.67
CCM2-202ENST00000381112 ERICH6BQ5W0A0 696 aa25.49■■□□□ 1.67
CCM2-202ENST00000381112 GNAI1P63096 354 aa25.49■■□□□ 1.67
CCM2-202ENST00000381112 PIP4K2BP78356 416 aa25.49■■□□□ 1.67
CCM2-202ENST00000381112 MCM10Q7L590 875 aa25.49■■□□□ 1.67
CCM2-202ENST00000381112 UBAP1LF5GYI3 381 aa25.48■■□□□ 1.67
CCM2-202ENST00000381112 HTATSF1O43719 755 aaKnown RBP25.48■■□□□ 1.67
CCM2-202ENST00000381112 NLRP2Q9NX02 1062 aa25.48■■□□□ 1.67
CCM2-202ENST00000381112 CFAP44Q96MT7 982 aa25.47■■□□□ 1.67
CCM2-202ENST00000381112 CSB-PGBD3P0DP91 1061 aa25.47■■□□□ 1.67
CCM2-202ENST00000381112 LAS1LQ9Y4W2 734 aaKnown RBP25.47■■□□□ 1.67
CCM2-202ENST00000381112 CT47B1P0C2W7 299 aaPredicted RBP25.46■■□□□ 1.67
CCM2-202ENST00000381112 EXOSC9Q06265 439 aaKnown RBP25.46■■□□□ 1.67
CCM2-202ENST00000381112 RTF1Q92541 710 aaKnown RBP25.46■■□□□ 1.67
CCM2-202ENST00000381112 COL16A1Q07092 1604 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms