RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 PHACTR3Q96KR7 559 aa27.99■■■□□ 2.07
GMDS-202ENST00000380815 STRCQ7RTU9 1775 aa27.98■■■□□ 2.07
GMDS-202ENST00000380815 NFE2L2Q16236 605 aa27.97■■■□□ 2.07
GMDS-202ENST00000380815 KIF1AQ12756 1690 aa27.97■■■□□ 2.07
GMDS-202ENST00000380815 NUTM2GQ5VZR2 741 aa27.96■■■□□ 2.07
GMDS-202ENST00000380815 RGPD1P0DJD0 1748 aa27.96■■■□□ 2.07
GMDS-202ENST00000380815 PLIN1O60240 522 aa27.96■■■□□ 2.07
GMDS-202ENST00000380815 ATF3P18847 181 aa27.96■■■□□ 2.07
GMDS-202ENST00000380815 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.96■■■□□ 2.07
GMDS-202ENST00000380815 AMPHP49418 695 aa27.95■■■□□ 2.06
GMDS-202ENST00000380815 FOXO3O43524 673 aa27.94■■■□□ 2.06
GMDS-202ENST00000380815 B4GALNT3Q6L9W6 998 aa27.94■■■□□ 2.06
GMDS-202ENST00000380815 MST1RQ04912 1400 aa27.93■■■□□ 2.06
GMDS-202ENST00000380815 SULT6B1Q6IMI4 303 aa27.92■■■□□ 2.06
GMDS-202ENST00000380815 ARHGEF10O15013 1369 aa27.92■■■□□ 2.06
GMDS-202ENST00000380815 EXOC6Q8TAG9 804 aa27.91■■■□□ 2.06
GMDS-202ENST00000380815 CADPS2Q86UW7 1296 aa27.9■■■□□ 2.06
GMDS-202ENST00000380815 RTL1A6NKG5 1358 aa27.9■■■□□ 2.06
GMDS-202ENST00000380815 AEBP1Q8IUX7 1158 aa27.89■■■□□ 2.06
GMDS-202ENST00000380815 FANCIQ9NVI1 1328 aa27.89■■■□□ 2.06
GMDS-202ENST00000380815 CT47B1P0C2W7 299 aaPredicted RBP27.88■■■□□ 2.05
GMDS-202ENST00000380815 HOXC9P31274 260 aa27.88■■■□□ 2.05
GMDS-202ENST00000380815 NFAT5O94916 1531 aa27.88■■■□□ 2.05
GMDS-202ENST00000380815 KCNH5Q8NCM2 988 aa27.88■■■□□ 2.05
GMDS-202ENST00000380815 CALD1Q05682 793 aaKnown RBP27.87■■■□□ 2.05
GMDS-202ENST00000380815 LMOD3Q0VAK6 560 aa27.87■■■□□ 2.05
GMDS-202ENST00000380815 CCDC136Q96JN2 1154 aa27.87■■■□□ 2.05
GMDS-202ENST00000380815 MSH6P52701 1360 aa27.87■■■□□ 2.05
GMDS-202ENST00000380815 TRPM3Q9HCF6 1732 aaPredicted RBP27.87■■■□□ 2.05
GMDS-202ENST00000380815 BCAR3O75815 825 aa27.86■■■□□ 2.05
GMDS-202ENST00000380815 KRT28Q7Z3Y7 464 aa27.86■■■□□ 2.05
GMDS-202ENST00000380815 KDRP35968 1356 aa27.86■■■□□ 2.05
GMDS-202ENST00000380815 IGSF1Q8N6C5 1336 aa27.85■■■□□ 2.05
GMDS-202ENST00000380815 RARSP54136 660 aaKnown RBP27.84■■■□□ 2.05
GMDS-202ENST00000380815 XPCQ01831 940 aaPredicted RBP27.84■■■□□ 2.05
GMDS-202ENST00000380815 TSR2Q969E8 191 aaKnown RBP27.84■■■□□ 2.05
GMDS-202ENST00000380815 C20orf194Q5TEA3 1177 aa27.83■■■□□ 2.05
GMDS-202ENST00000380815 CRBNQ96SW2 442 aa27.83■■■□□ 2.05
GMDS-202ENST00000380815 EYA1Q99502 592 aa27.82■■■□□ 2.04
GMDS-202ENST00000380815 SLIT3O75094 1523 aa27.82■■■□□ 2.04
GMDS-202ENST00000380815 XIRP1Q702N8 1843 aaKnown RBP27.82■■■□□ 2.04
GMDS-202ENST00000380815 LTN1O94822 1766 aa27.82■■■□□ 2.04
GMDS-202ENST00000380815 DLG5Q8TDM6 1919 aa27.81■■■□□ 2.04
GMDS-202ENST00000380815 IP6K1Q92551 441 aa27.81■■■□□ 2.04
GMDS-202ENST00000380815 PHRF1Q9P1Y6 1649 aaKnown RBP27.8■■■□□ 2.04
GMDS-202ENST00000380815 USP19O94966 1318 aa27.79■■■□□ 2.04
GMDS-202ENST00000380815 EXOSC9Q06265 439 aaKnown RBP27.79■■■□□ 2.04
GMDS-202ENST00000380815 GCP02774 474 aa27.78■■■□□ 2.04
GMDS-202ENST00000380815 IFT57Q9NWB7 429 aa27.78■■■□□ 2.04
GMDS-202ENST00000380815 ZNF335Q9H4Z2 1342 aaPredicted RBP27.77■■■□□ 2.04
GMDS-202ENST00000380815 GNAI1P63096 354 aa27.76■■■□□ 2.03
GMDS-202ENST00000380815 PDE3AQ14432 1141 aa27.76■■■□□ 2.03
GMDS-202ENST00000380815 ALS2Q96Q42 1657 aa27.76■■■□□ 2.03
GMDS-202ENST00000380815 ZNF853P0CG23 659 aa27.76■■■□□ 2.03
GMDS-202ENST00000380815 THUMPD2Q9BTF0 503 aaKnown RBP27.76■■■□□ 2.03
GMDS-202ENST00000380815 NPHP3Q7Z494 1330 aa27.75■■■□□ 2.03
GMDS-202ENST00000380815 LMOD2Q6P5Q4 547 aa27.75■■■□□ 2.03
GMDS-202ENST00000380815 ARHGEF25Q86VW2 580 aa27.73■■■□□ 2.03
GMDS-202ENST00000380815 CFAP44Q96MT7 982 aa27.73■■■□□ 2.03
GMDS-202ENST00000380815 FAM83GA6ND36 823 aa27.71■■■□□ 2.03
GMDS-202ENST00000380815 CANXP27824 592 aaKnown RBP27.71■■■□□ 2.03
GMDS-202ENST00000380815 LAS1LQ9Y4W2 734 aaKnown RBP27.71■■■□□ 2.03
GMDS-202ENST00000380815 LTV1Q96GA3 475 aaPredicted RBP27.7■■■□□ 2.02
GMDS-202ENST00000380815 ZNF428Q96B54 188 aa27.69■■■□□ 2.02
GMDS-202ENST00000380815 MTHFSDQ2M296 383 aaKnown RBP27.68■■■□□ 2.02
GMDS-202ENST00000380815 GAS2L2Q8NHY3 880 aa27.68■■■□□ 2.02
GMDS-202ENST00000380815 FRAT1Q92837 279 aaPredicted RBP27.68■■■□□ 2.02
GMDS-202ENST00000380815 BCL2L13Q9BXK5 485 aa27.68■■■□□ 2.02
GMDS-202ENST00000380815 MBIPQ9NS73 344 aa27.68■■■□□ 2.02
GMDS-202ENST00000380815 PXDNQ92626 1479 aa27.67■■■□□ 2.02
GMDS-202ENST00000380815 DCTN1Q14203 1278 aa27.67■■■□□ 2.02
GMDS-202ENST00000380815 DDX17Q92841 729 aaKnown RBP27.67■■■□□ 2.02
GMDS-202ENST00000380815 TNS3Q68CZ2 1445 aa27.66■■■□□ 2.02
GMDS-202ENST00000380815 MED1Q15648 1581 aaPredicted RBP27.66■■■□□ 2.02
GMDS-202ENST00000380815 BRINP3Q76B58 766 aa27.65■■■□□ 2.02
GMDS-202ENST00000380815 ALDH1L2Q3SY69 923 aa27.65■■■□□ 2.02
GMDS-202ENST00000380815 SSH1Q8WYL5 1049 aa27.65■■■□□ 2.02
GMDS-202ENST00000380815 SMC4Q9NTJ3 1288 aa27.65■■■□□ 2.02
GMDS-202ENST00000380815 TSHZ2Q9NRE2 1034 aa27.64■■■□□ 2.02
GMDS-202ENST00000380815 ZBTB7CA1YPR0 619 aa27.63■■■□□ 2.01
GMDS-202ENST00000380815 SLAIN2Q9P270 581 aa27.63■■■□□ 2.01
GMDS-202ENST00000380815 HTATSF1O43719 755 aaKnown RBP27.63■■■□□ 2.01
GMDS-202ENST00000380815 MCM10Q7L590 875 aa27.63■■■□□ 2.01
GMDS-202ENST00000380815 NBPF6Q5VWK0 638 aa27.62■■■□□ 2.01
GMDS-202ENST00000380815 ZKSCAN2Q63HK3 967 aa27.62■■■□□ 2.01
GMDS-202ENST00000380815 NBPF4Q96M43 638 aa27.62■■■□□ 2.01
GMDS-202ENST00000380815 SPATA31A3Q5VYP0 1347 aa27.61■■■□□ 2.01
GMDS-202ENST00000380815 PANK1Q8TE04 598 aa27.61■■■□□ 2.01
GMDS-202ENST00000380815 RTF1Q92541 710 aaKnown RBP27.61■■■□□ 2.01
GMDS-202ENST00000380815 CHL1O00533 1208 aa27.6■■■□□ 2.01
GMDS-202ENST00000380815 VAMP4O75379 141 aa27.6■■■□□ 2.01
GMDS-202ENST00000380815 MS4A1P11836 297 aa27.6■■■□□ 2.01
GMDS-202ENST00000380815 BRPF1P55201 1214 aaPredicted RBP27.6■■■□□ 2.01
GMDS-202ENST00000380815 CRB1P82279 1406 aa27.6■■■□□ 2.01
GMDS-202ENST00000380815 PLEKHG5O94827 1062 aa27.59■■■□□ 2.01
GMDS-202ENST00000380815 NCAPD2Q15021 1401 aa27.58■■■□□ 2.01
GMDS-202ENST00000380815 AAMPQ13685 434 aa27.58■■■□□ 2.01
GMDS-202ENST00000380815 USHBP1Q8N6Y0 703 aa27.58■■■□□ 2.01
GMDS-202ENST00000380815 KIF16BQ96L93 1317 aa27.58■■■□□ 2.01
GMDS-202ENST00000380815 COG6Q9Y2V7 657 aa27.58■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms