RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 MARCH10Q8NA82 808 aaPredicted RBP25.39■■□□□ 1.66
HMGN1-203ENST00000380748 SLIT3O75094 1523 aa25.38■■□□□ 1.65
HMGN1-203ENST00000380748 AKAP12Q02952 1782 aa25.37■■□□□ 1.65
HMGN1-203ENST00000380748 FHDC1Q9C0D6 1143 aaPredicted RBP25.37■■□□□ 1.65
HMGN1-203ENST00000380748 COL18A1P39060 1754 aa25.36■■□□□ 1.65
HMGN1-203ENST00000380748 SENP3-EIF4A1A0A087X0R7 540 aa25.36■■□□□ 1.65
HMGN1-203ENST00000380748 SYT17Q9BSW7 474 aa25.36■■□□□ 1.65
HMGN1-203ENST00000380748 BCL9O00512 1426 aa25.36■■□□□ 1.65
HMGN1-203ENST00000380748 SRPK2P78362 688 aaKnown RBP25.35■■□□□ 1.65
HMGN1-203ENST00000380748 TXNRD1Q16881 649 aa25.35■■□□□ 1.65
HMGN1-203ENST00000380748 STK32BQ9NY57 414 aa25.35■■□□□ 1.65
HMGN1-203ENST00000380748 NLRP6P59044 892 aa25.34■■□□□ 1.65
HMGN1-203ENST00000380748 CABP2Q9NPB3 220 aa25.34■■□□□ 1.65
HMGN1-203ENST00000380748 SLC15A2Q16348 729 aa25.33■■□□□ 1.65
HMGN1-203ENST00000380748 AXIN2Q9Y2T1 843 aa25.33■■□□□ 1.65
HMGN1-203ENST00000380748 CHD4Q14839 1912 aa25.33■■□□□ 1.65
HMGN1-203ENST00000380748 WDR17Q8IZU2 1322 aa25.33■■□□□ 1.64
HMGN1-203ENST00000380748 BRD4O60885 1362 aaPredicted RBP25.32■■□□□ 1.64
HMGN1-203ENST00000380748 USP6P35125 1406 aa25.32■■□□□ 1.64
HMGN1-203ENST00000380748 KIAA1210Q9ULL0 1709 aa25.32■■□□□ 1.64
HMGN1-203ENST00000380748 SGIP1Q9BQI5 828 aa25.31■■□□□ 1.64
HMGN1-203ENST00000380748 PIK3C2AO00443 1686 aa25.3■■□□□ 1.64
HMGN1-203ENST00000380748 MTFR1LQ9H019 292 aa25.3■■□□□ 1.64
HMGN1-203ENST00000380748 C1QTNF8P60827 252 aa25.29■■□□□ 1.64
HMGN1-203ENST00000380748 NBPF1Q3BBV0 1214 aa25.29■■□□□ 1.64
HMGN1-203ENST00000380748 CDCA7Q9BWT1 371 aaPredicted RBP25.29■■□□□ 1.64
HMGN1-203ENST00000380748 CPSF1Q10570 1443 aaKnown RBP25.29■■□□□ 1.64
HMGN1-203ENST00000380748 RGPD5Q99666 1765 aa25.27■■□□□ 1.64
HMGN1-203ENST00000380748 CABP1Q9NZU7 370 aa25.27■■□□□ 1.64
HMGN1-203ENST00000380748 CENPJQ9HC77 1338 aaPredicted RBP25.26■■□□□ 1.63
HMGN1-203ENST00000380748 QRICH2Q9H0J4 1663 aa25.24■■□□□ 1.63
HMGN1-203ENST00000380748 CARD10Q9BWT7 1032 aa25.24■■□□□ 1.63
HMGN1-203ENST00000380748 CSB-PGBD3P0DP91 1061 aa25.23■■□□□ 1.63
HMGN1-203ENST00000380748 ARHGEF25Q86VW2 580 aa25.23■■□□□ 1.63
HMGN1-203ENST00000380748 ARXQ96QS3 562 aa25.23■■□□□ 1.63
HMGN1-203ENST00000380748 EXOC5O00471 708 aa25.22■■□□□ 1.63
HMGN1-203ENST00000380748 NHSQ6T4R5 1651 aa25.22■■□□□ 1.63
HMGN1-203ENST00000380748 PAPPAQ13219 1627 aa25.22■■□□□ 1.63
HMGN1-203ENST00000380748 SOX12O15370 315 aa25.21■■□□□ 1.63
HMGN1-203ENST00000380748 TNS2Q63HR2 1409 aa25.2■■□□□ 1.63
HMGN1-203ENST00000380748 MAP3K5Q99683 1374 aa25.19■■□□□ 1.62
HMGN1-203ENST00000380748 GOLGB1Q14789 3259 aaKnown RBP25.19■■□□□ 1.62
HMGN1-203ENST00000380748 TRPM1Q7Z4N2 1603 aa25.19■■□□□ 1.62
HMGN1-203ENST00000380748 ACSBG1Q96GR2 724 aa25.18■■□□□ 1.62
HMGN1-203ENST00000380748 CEP350Q5VT06 3117 aa25.17■■□□□ 1.62
HMGN1-203ENST00000380748 KCNH5Q8NCM2 988 aa25.16■■□□□ 1.62
HMGN1-203ENST00000380748 NFAT5O94916 1531 aa25.16■■□□□ 1.62
HMGN1-203ENST00000380748 CCDC7Q96M83 1385 aa25.16■■□□□ 1.62
HMGN1-203ENST00000380748 ZNF827Q17R98 1081 aa25.15■■□□□ 1.62
HMGN1-203ENST00000380748 TTC21BQ7Z4L5 1316 aa25.14■■□□□ 1.62
HMGN1-203ENST00000380748 ABCC6O95255 1503 aa25.14■■□□□ 1.62
HMGN1-203ENST00000380748 GPR162Q16538 588 aa25.14■■□□□ 1.62
HMGN1-203ENST00000380748 IFFO2Q5TF58 517 aa25.13■■□□□ 1.61
HMGN1-203ENST00000380748 BTAF1O14981 1849 aa25.13■■□□□ 1.61
HMGN1-203ENST00000380748 GIGYF1O75420 1035 aaPredicted RBP25.11■■□□□ 1.61
HMGN1-203ENST00000380748 LRRC4BQ9NT99 713 aa25.1■■□□□ 1.61
HMGN1-203ENST00000380748 KLHL34Q8N239 644 aa25.09■■□□□ 1.61
HMGN1-203ENST00000380748 EVC2Q86UK5 1308 aa25.08■■□□□ 1.6
HMGN1-203ENST00000380748 TTC21AQ8NDW8 1320 aa25.07■■□□□ 1.6
HMGN1-203ENST00000380748 PELP1Q8IZL8 1130 aaKnown RBP25.06■■□□□ 1.6
HMGN1-203ENST00000380748 ZNF692Q9BU19 519 aaPredicted RBP25.06■■□□□ 1.6
HMGN1-203ENST00000380748 SHANK3Q9BYB0 1731 aa25.06■■□□□ 1.6
HMGN1-203ENST00000380748 NLRP2Q9NX02 1062 aa25.05■■□□□ 1.6
HMGN1-203ENST00000380748 KAT6BQ8WYB5 2073 aa25.05■■□□□ 1.6
HMGN1-203ENST00000380748 AKT1S1Q96B36 256 aa25.04■■□□□ 1.6
HMGN1-203ENST00000380748 ERBB3P21860 1342 aa25.04■■□□□ 1.6
HMGN1-203ENST00000380748 COL24A1Q17RW2 1714 aa25.03■■□□□ 1.6
HMGN1-203ENST00000380748 IL2RBP14784 551 aa25.03■■□□□ 1.6
HMGN1-203ENST00000380748 QSER1Q2KHR3 1735 aa25.03■■□□□ 1.6
HMGN1-203ENST00000380748 NLGN2Q8NFZ4 835 aa25.02■■□□□ 1.6
HMGN1-203ENST00000380748 POLD1P28340 1107 aa25.01■■□□□ 1.59
HMGN1-203ENST00000380748 SLC16A10Q8TF71 515 aa25.01■■□□□ 1.59
HMGN1-203ENST00000380748 PNPLA7Q6ZV29 1317 aa25.01■■□□□ 1.59
HMGN1-203ENST00000380748 KTN1Q86UP2 1357 aaKnown RBP25.01■■□□□ 1.59
HMGN1-203ENST00000380748 TUBGCP6Q96RT7 1819 aa25■■□□□ 1.59
HMGN1-203ENST00000380748 MON2Q7Z3U7 1717 aa24.98■■□□□ 1.59
HMGN1-203ENST00000380748 LTN1O94822 1766 aa24.98■■□□□ 1.59
HMGN1-203ENST00000380748 KCNQ4P56696 695 aa24.96■■□□□ 1.59
HMGN1-203ENST00000380748 SLC27A3Q5K4L6 730 aa24.96■■□□□ 1.59
HMGN1-203ENST00000380748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.96■■□□□ 1.59
HMGN1-203ENST00000380748 ANKRD24Q8TF21 1146 aa24.96■■□□□ 1.59
HMGN1-203ENST00000380748 USP31Q70CQ4 1352 aa24.95■■□□□ 1.59
HMGN1-203ENST00000380748 USP54Q70EL1 1684 aa24.95■■□□□ 1.58
HMGN1-203ENST00000380748 YBX3P16989 372 aaKnown RBP eCLIP24.94■■□□□ 1.58
HMGN1-203ENST00000380748 TFCP2L1Q9NZI6 479 aa24.94■■□□□ 1.58
HMGN1-203ENST00000380748 NME9Q86XW9 330 aa24.93■■□□□ 1.58
HMGN1-203ENST00000380748 DDX54Q8TDD1 881 aaKnown RBP24.91■■□□□ 1.58
HMGN1-203ENST00000380748 L3MBTL2Q969R5 705 aa24.89■■□□□ 1.58
HMGN1-203ENST00000380748 SBNO2Q9Y2G9 1366 aa24.89■■□□□ 1.57
HMGN1-203ENST00000380748 GRIN3BO60391 1043 aa24.88■■□□□ 1.57
HMGN1-203ENST00000380748 CD163L1Q9NR16 1453 aa24.88■■□□□ 1.57
HMGN1-203ENST00000380748 ATP10DQ9P241 1426 aa24.87■■□□□ 1.57
HMGN1-203ENST00000380748 LY75O60449 1722 aa24.87■■□□□ 1.57
HMGN1-203ENST00000380748 DOT1LQ8TEK3 1739 aa24.87■■□□□ 1.57
HMGN1-203ENST00000380748 SYTL4Q96C24 671 aaPredicted RBP24.87■■□□□ 1.57
HMGN1-203ENST00000380748 ROCK2O75116 1388 aaKnown RBP24.86■■□□□ 1.57
HMGN1-203ENST00000380748 NSD2O96028 1365 aa24.86■■□□□ 1.57
HMGN1-203ENST00000380748 PRIM1P49642 420 aaKnown RBP24.86■■□□□ 1.57
HMGN1-203ENST00000380748 ANKRD36BQ8N2N9 1353 aa24.85■■□□□ 1.57
HMGN1-203ENST00000380748 MSH5O43196 834 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms