RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SULT6B1Q6IMI4 303 aa19.45■□□□□ 0.7
SNX2-201ENST00000379516 ABTB2Q8N961 1025 aa19.45■□□□□ 0.7
SNX2-201ENST00000379516 BCL2L13Q9BXK5 485 aa19.45■□□□□ 0.7
SNX2-201ENST00000379516 PIK3C2AO00443 1686 aa19.45■□□□□ 0.7
SNX2-201ENST00000379516 PEAK1Q9H792 1746 aa19.44■□□□□ 0.7
SNX2-201ENST00000379516 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
SNX2-201ENST00000379516 SBNO1A3KN83 1393 aa19.43■□□□□ 0.7
SNX2-201ENST00000379516 AMPHP49418 695 aa19.43■□□□□ 0.7
SNX2-201ENST00000379516 PROSER2Q86WR7 435 aaPredicted RBP19.43■□□□□ 0.7
SNX2-201ENST00000379516 LAS1LQ9Y4W2 734 aaKnown RBP19.43■□□□□ 0.7
SNX2-201ENST00000379516 FLT4P35916 1363 aa19.42■□□□□ 0.7
SNX2-201ENST00000379516 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
SNX2-201ENST00000379516 PANK1Q8TE04 598 aa19.42■□□□□ 0.7
SNX2-201ENST00000379516 THUMPD2Q9BTF0 503 aaKnown RBP19.42■□□□□ 0.7
SNX2-201ENST00000379516 PSME1Q06323 249 aa19.41■□□□□ 0.7
SNX2-201ENST00000379516 LMOD3Q0VAK6 560 aa19.41■□□□□ 0.7
SNX2-201ENST00000379516 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
SNX2-201ENST00000379516 COG6Q9Y2V7 657 aa19.4■□□□□ 0.7
SNX2-201ENST00000379516 SMC4Q9NTJ3 1288 aa19.38■□□□□ 0.69
SNX2-201ENST00000379516 ORAI2Q96SN7 254 aa19.37■□□□□ 0.69
SNX2-201ENST00000379516 FAM83GA6ND36 823 aa19.37■□□□□ 0.69
SNX2-201ENST00000379516 GNAI1P63096 354 aa19.37■□□□□ 0.69
SNX2-201ENST00000379516 IFT57Q9NWB7 429 aa19.37■□□□□ 0.69
SNX2-201ENST00000379516 TNNQ9UQP3 1299 aa19.37■□□□□ 0.69
SNX2-201ENST00000379516 SSH1Q8WYL5 1049 aa19.36■□□□□ 0.69
SNX2-201ENST00000379516 ARHGEF10O15013 1369 aa19.36■□□□□ 0.69
SNX2-201ENST00000379516 KDM2BQ8NHM5 1336 aa19.36■□□□□ 0.69
SNX2-201ENST00000379516 ZKSCAN2Q63HK3 967 aa19.36■□□□□ 0.69
SNX2-201ENST00000379516 CENPQQ7L2Z9 268 aaPredicted RBP19.36■□□□□ 0.69
SNX2-201ENST00000379516 HOXC9P31274 260 aa19.35■□□□□ 0.69
SNX2-201ENST00000379516 DCTN1Q14203 1278 aa19.35■□□□□ 0.69
SNX2-201ENST00000379516 CLUAP1Q96AJ1 413 aa19.35■□□□□ 0.69
SNX2-201ENST00000379516 RGPD1P0DJD0 1748 aa19.34■□□□□ 0.69
SNX2-201ENST00000379516 RLBP1P12271 317 aa19.34■□□□□ 0.69
SNX2-201ENST00000379516 KIF24Q5T7B8 1368 aa19.34■□□□□ 0.69
SNX2-201ENST00000379516 FOXO3O43524 673 aa19.34■□□□□ 0.69
SNX2-201ENST00000379516 ZNF853P0CG23 659 aa19.34■□□□□ 0.69
SNX2-201ENST00000379516 EYA1Q99502 592 aa19.34■□□□□ 0.69
SNX2-201ENST00000379516 C19orf44Q9H6X5 657 aa19.34■□□□□ 0.69
SNX2-201ENST00000379516 USP54Q70EL1 1684 aa19.33■□□□□ 0.69
SNX2-201ENST00000379516 HSPA2P54652 639 aa19.33■□□□□ 0.69
SNX2-201ENST00000379516 CFAP44Q96MT7 982 aa19.33■□□□□ 0.69
SNX2-201ENST00000379516 MARF1Q9Y4F3 1742 aaKnown RBP19.33■□□□□ 0.69
SNX2-201ENST00000379516 TCERG1O14776 1098 aaKnown RBP19.33■□□□□ 0.68
SNX2-201ENST00000379516 MBIPQ9NS73 344 aa19.33■□□□□ 0.68
SNX2-201ENST00000379516 IGSF1Q8N6C5 1336 aa19.32■□□□□ 0.68
SNX2-201ENST00000379516 XPCQ01831 940 aaPredicted RBP19.31■□□□□ 0.68
SNX2-201ENST00000379516 FTSJ3Q8IY81 847 aaKnown RBP19.31■□□□□ 0.68
SNX2-201ENST00000379516 DLG5Q8TDM6 1919 aa19.31■□□□□ 0.68
SNX2-201ENST00000379516 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
SNX2-201ENST00000379516 NOB1Q9ULX3 412 aaKnown RBP19.31■□□□□ 0.68
SNX2-201ENST00000379516 MS4A1P11836 297 aa19.3■□□□□ 0.68
SNX2-201ENST00000379516 ALDH1L2Q3SY69 923 aa19.3■□□□□ 0.68
SNX2-201ENST00000379516 KDRP35968 1356 aa19.3■□□□□ 0.68
SNX2-201ENST00000379516 LTV1Q96GA3 475 aaPredicted RBP19.3■□□□□ 0.68
SNX2-201ENST00000379516 MCM10Q7L590 875 aa19.29■□□□□ 0.68
SNX2-201ENST00000379516 SKAP1Q86WV1 359 aa19.29■□□□□ 0.68
SNX2-201ENST00000379516 ZNF428Q96B54 188 aa19.29■□□□□ 0.68
SNX2-201ENST00000379516 VAMP4O75379 141 aa19.28■□□□□ 0.68
SNX2-201ENST00000379516 TRIM27P14373 513 aa19.28■□□□□ 0.68
SNX2-201ENST00000379516 AAMPQ13685 434 aa19.28■□□□□ 0.68
SNX2-201ENST00000379516 ATF7IPQ6VMQ6 1270 aa19.28■□□□□ 0.68
SNX2-201ENST00000379516 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
SNX2-201ENST00000379516 KCNH5Q8NCM2 988 aa19.28■□□□□ 0.68
SNX2-201ENST00000379516 TMEM94Q12767 1356 aa19.28■□□□□ 0.68
SNX2-201ENST00000379516 C1orf167Q5SNV9 1468 aa19.28■□□□□ 0.68
SNX2-201ENST00000379516 MVPQ14764 893 aaKnown RBP19.28■□□□□ 0.68
SNX2-201ENST00000379516 MTHFSDQ2M296 383 aaKnown RBP19.28■□□□□ 0.68
SNX2-201ENST00000379516 KIF16BQ96L93 1317 aa19.28■□□□□ 0.68
SNX2-201ENST00000379516 RTL1A6NKG5 1358 aa19.27■□□□□ 0.68
SNX2-201ENST00000379516 ELL2O00472 640 aaPredicted RBP19.27■□□□□ 0.68
SNX2-201ENST00000379516 ATF3P18847 181 aa19.27■□□□□ 0.68
SNX2-201ENST00000379516 LMOD2Q6P5Q4 547 aa19.27■□□□□ 0.68
SNX2-201ENST00000379516 ZBTB7CA1YPR0 619 aa19.27■□□□□ 0.67
SNX2-201ENST00000379516 IPO8O15397 1037 aaKnown RBP19.27■□□□□ 0.67
SNX2-201ENST00000379516 KRT28Q7Z3Y7 464 aa19.27■□□□□ 0.67
SNX2-201ENST00000379516 IP6K1Q92551 441 aa19.27■□□□□ 0.67
SNX2-201ENST00000379516 IGHDP01880 384 aa19.26■□□□□ 0.67
SNX2-201ENST00000379516 PLEKHG5O94827 1062 aa19.25■□□□□ 0.67
SNX2-201ENST00000379516 TWISTNBQ3B726 338 aaPredicted RBP19.25■□□□□ 0.67
SNX2-201ENST00000379516 C8orf58Q8NAV2 365 aa19.25■□□□□ 0.67
SNX2-201ENST00000379516 RTF1Q92541 710 aaKnown RBP19.25■□□□□ 0.67
SNX2-201ENST00000379516 NFAT5O94916 1531 aa19.25■□□□□ 0.67
SNX2-201ENST00000379516 KDM4FA0A1W2PPD8 638 aa19.24■□□□□ 0.67
SNX2-201ENST00000379516 GAS2L2Q8NHY3 880 aa19.24■□□□□ 0.67
SNX2-201ENST00000379516 GCP02774 474 aa19.23■□□□□ 0.67
SNX2-201ENST00000379516 BRPF1P55201 1214 aaPredicted RBP19.23■□□□□ 0.67
SNX2-201ENST00000379516 CHL1O00533 1208 aa19.22■□□□□ 0.67
SNX2-201ENST00000379516 ITPRIPQ8IWB1 547 aa19.22■□□□□ 0.67
SNX2-201ENST00000379516 MRPL50Q8N5N7 158 aaKnown RBP19.22■□□□□ 0.67
SNX2-201ENST00000379516 NCOA3Q9Y6Q9 1424 aa19.22■□□□□ 0.67
SNX2-201ENST00000379516 PCDHB15Q9Y5E8 787 aa19.22■□□□□ 0.67
SNX2-201ENST00000379516 STRCP1A6NGW2 1772 aa19.22■□□□□ 0.67
SNX2-201ENST00000379516 LTN1O94822 1766 aa19.21■□□□□ 0.67
SNX2-201ENST00000379516 USHBP1Q8N6Y0 703 aa19.21■□□□□ 0.67
SNX2-201ENST00000379516 MST1RQ04912 1400 aa19.21■□□□□ 0.67
SNX2-201ENST00000379516 TMEM57Q8N5G2 664 aa19.21■□□□□ 0.67
SNX2-201ENST00000379516 DDX19BQ9UMR2 479 aa19.21■□□□□ 0.67
SNX2-201ENST00000379516 KIF1AQ12756 1690 aa19.2■□□□□ 0.66
SNX2-201ENST00000379516 DCCP43146 1447 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms