RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 MTHFSP49914 203 aa19.35■□□□□ 0.69
RGP1-201ENST00000378078 PUS7Q96PZ0 661 aaKnown RBP19.35■□□□□ 0.69
RGP1-201ENST00000378078 SMG6Q86US8 1419 aaKnown RBP19.35■□□□□ 0.69
RGP1-201ENST00000378078 ADAMTS2O95450 1211 aa19.35■□□□□ 0.69
RGP1-201ENST00000378078 CCDC57Q2TAC2 916 aa19.35■□□□□ 0.69
RGP1-201ENST00000378078 ABCF2Q9UG63 623 aa19.34■□□□□ 0.69
RGP1-201ENST00000378078 GOLGA6L10A6NI86 522 aa19.34■□□□□ 0.69
RGP1-201ENST00000378078 HMGN5P82970 282 aaKnown RBP19.34■□□□□ 0.69
RGP1-201ENST00000378078 LRP2BPQ9P2M1 347 aa19.34■□□□□ 0.69
RGP1-201ENST00000378078 NUCB2P80303 420 aa19.33■□□□□ 0.69
RGP1-201ENST00000378078 TSPY26PQ9H489 355 aa19.33■□□□□ 0.69
RGP1-201ENST00000378078 SLC4A2P04920 1241 aa19.33■□□□□ 0.69
RGP1-201ENST00000378078 PPFIBP1Q86W92 1011 aa19.33■□□□□ 0.69
RGP1-201ENST00000378078 BCAR3O75815 825 aa19.33■□□□□ 0.68
RGP1-201ENST00000378078 MIS18AQ9NYP9 233 aa19.32■□□□□ 0.68
RGP1-201ENST00000378078 CCDC113Q9H0I3 377 aa19.32■□□□□ 0.68
RGP1-201ENST00000378078 VPS8Q8N3P4 1428 aa19.32■□□□□ 0.68
RGP1-201ENST00000378078 ANKIB1Q9P2G1 1089 aa19.31■□□□□ 0.68
RGP1-201ENST00000378078 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.31■□□□□ 0.68
RGP1-201ENST00000378078 PRKAR2BP31323 418 aa19.31■□□□□ 0.68
RGP1-201ENST00000378078 ANKRD18AQ8IVF6 992 aa19.31■□□□□ 0.68
RGP1-201ENST00000378078 ZNF396Q96N95 335 aaPredicted RBP19.31■□□□□ 0.68
RGP1-201ENST00000378078 CCDC39Q9UFE4 941 aa19.31■□□□□ 0.68
RGP1-201ENST00000378078 IDH1O75874 414 aaKnown RBP19.3■□□□□ 0.68
RGP1-201ENST00000378078 CWC27Q6UX04 472 aaKnown RBP19.3■□□□□ 0.68
RGP1-201ENST00000378078 AACSQ86V21 672 aa19.3■□□□□ 0.68
RGP1-201ENST00000378078 OSCARQ8IYS5 282 aa19.3■□□□□ 0.68
RGP1-201ENST00000378078 ANAPC15P60006 121 aa19.3■□□□□ 0.68
RGP1-201ENST00000378078 ZC3H6P61129 1189 aaKnown RBP19.3■□□□□ 0.68
RGP1-201ENST00000378078 MINDY4BA8MYZ0 360 aa19.29■□□□□ 0.68
RGP1-201ENST00000378078 ERCC4Q92889 916 aaPredicted RBP19.29■□□□□ 0.68
RGP1-201ENST00000378078 DHX57Q6P158 1386 aaKnown RBP19.29■□□□□ 0.68
RGP1-201ENST00000378078 CRACR2BQ8N4Y2 399 aaPredicted RBP19.29■□□□□ 0.68
RGP1-201ENST00000378078 PRAM1Q96QH2 718 aa19.29■□□□□ 0.68
RGP1-201ENST00000378078 DDX11Q96FC9 970 aa19.29■□□□□ 0.68
RGP1-201ENST00000378078 GOPCQ9HD26 462 aa19.29■□□□□ 0.68
RGP1-201ENST00000378078 BTBD11A6QL63 1104 aa19.28■□□□□ 0.68
RGP1-201ENST00000378078 C11orf95C9JLR9 678 aaPredicted RBP19.28■□□□□ 0.68
RGP1-201ENST00000378078 RRS1Q15050 365 aaKnown RBP19.28■□□□□ 0.68
RGP1-201ENST00000378078 CCDC82Q8N4S0 544 aa19.28■□□□□ 0.68
RGP1-201ENST00000378078 STIM1Q13586 685 aa19.28■□□□□ 0.68
RGP1-201ENST00000378078 NACAP1Q9BZK3 213 aa19.28■□□□□ 0.68
RGP1-201ENST00000378078 SERPINA10Q9UK55 444 aa19.28■□□□□ 0.68
RGP1-201ENST00000378078 HDGFL1Q5TGJ6 251 aa19.28■□□□□ 0.68
RGP1-201ENST00000378078 SULT6B1Q6IMI4 303 aa19.28■□□□□ 0.68
RGP1-201ENST00000378078 POLR3DP05423 398 aaPredicted RBP19.28■□□□□ 0.68
RGP1-201ENST00000378078 TRIM22Q8IYM9 498 aa19.28■□□□□ 0.68
RGP1-201ENST00000378078 CCDC112Q8NEF3 446 aa19.27■□□□□ 0.68
RGP1-201ENST00000378078 RSPH4AQ5TD94 716 aa19.27■□□□□ 0.68
RGP1-201ENST00000378078 LEKR1Q6ZMV7 388 aa19.27■□□□□ 0.68
RGP1-201ENST00000378078 EXOSC9Q06265 439 aaKnown RBP19.27■□□□□ 0.68
RGP1-201ENST00000378078 CTNNBL1Q8WYA6 563 aaPredicted RBP19.27■□□□□ 0.68
RGP1-201ENST00000378078 TNMDQ9H2S6 317 aa19.27■□□□□ 0.68
RGP1-201ENST00000378078 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
RGP1-201ENST00000378078 GNAI2P04899 355 aa19.27■□□□□ 0.67
RGP1-201ENST00000378078 DRC1Q96MC2 740 aa19.27■□□□□ 0.67
RGP1-201ENST00000378078 CAMK4Q16566 473 aa19.26■□□□□ 0.67
RGP1-201ENST00000378078 COMMD10Q9Y6G5 202 aa19.26■□□□□ 0.67
RGP1-201ENST00000378078 PTCD1O75127 700 aaKnown RBP19.26■□□□□ 0.67
RGP1-201ENST00000378078 RAD54L2Q9Y4B4 1467 aa19.26■□□□□ 0.67
RGP1-201ENST00000378078 UBAC1Q9BSL1 405 aa19.26■□□□□ 0.67
RGP1-201ENST00000378078 KIAA1328Q86T90 577 aa19.26■□□□□ 0.67
RGP1-201ENST00000378078 TWISTNBQ3B726 338 aaPredicted RBP19.25■□□□□ 0.67
RGP1-201ENST00000378078 GOLGA6L10A0A0M3HER8 536 aa19.25■□□□□ 0.67
RGP1-201ENST00000378078 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
RGP1-201ENST00000378078 MACROD2A1Z1Q3 448 aa19.25■□□□□ 0.67
RGP1-201ENST00000378078 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
RGP1-201ENST00000378078 MIA2Q96PC5 1412 aa19.24■□□□□ 0.67
RGP1-201ENST00000378078 CDCA7LQ96GN5 454 aa19.24■□□□□ 0.67
RGP1-201ENST00000378078 IL1RAPL2Q9NP60 686 aa19.24■□□□□ 0.67
RGP1-201ENST00000378078 ZNF644Q9H582 1327 aaPredicted RBP19.24■□□□□ 0.67
RGP1-201ENST00000378078 CCDC96Q2M329 555 aa19.24■□□□□ 0.67
RGP1-201ENST00000378078 ERICH4A6NGS2 130 aa19.24■□□□□ 0.67
RGP1-201ENST00000378078 BCCIPQ9P287 314 aaKnown RBP eCLIP19.24■□□□□ 0.67
RGP1-201ENST00000378078 TERF1P54274 439 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 NUTM1Q86Y26 1132 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 PTPRGP23470 1445 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 NACADO15069 1562 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 DESP17661 470 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 MMRN2Q9H8L6 949 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 USHBP1Q8N6Y0 703 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 VTI1AQ96AJ9 217 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 ADAMTS8Q9UP79 889 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 CYP46A1Q9Y6A2 500 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 ZPR1O75312 459 aa19.23■□□□□ 0.67
RGP1-201ENST00000378078 GUCY1B3Q02153 619 aa19.22■□□□□ 0.67
RGP1-201ENST00000378078 GAS2L2Q8NHY3 880 aa19.22■□□□□ 0.67
RGP1-201ENST00000378078 CEP57L1Q8IYX8 460 aa19.22■□□□□ 0.67
RGP1-201ENST00000378078 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
RGP1-201ENST00000378078 CDK19Q9BWU1 502 aa19.22■□□□□ 0.67
RGP1-201ENST00000378078 CWC15Q9P013 229 aaKnown RBP19.22■□□□□ 0.67
RGP1-201ENST00000378078 UBE4AQ14139 1066 aa19.22■□□□□ 0.67
RGP1-201ENST00000378078 SPG7Q9UQ90 795 aa19.21■□□□□ 0.67
RGP1-201ENST00000378078 KLHL10Q6JEL2 608 aa19.21■□□□□ 0.67
RGP1-201ENST00000378078 TMOD2Q9NZR1 351 aa19.21■□□□□ 0.67
RGP1-201ENST00000378078 EIF5P55010 431 aaKnown RBP19.21■□□□□ 0.67
RGP1-201ENST00000378078 TRAK2O60296 914 aa19.21■□□□□ 0.67
RGP1-201ENST00000378078 IGHMBP2P38935 993 aaKnown RBP19.21■□□□□ 0.67
RGP1-201ENST00000378078 SPTY2D1Q68D10 685 aaPredicted RBP19.21■□□□□ 0.67
RGP1-201ENST00000378078 SLC26A8Q96RN1 970 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms