RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 MRPL50Q8N5N7 158 aaKnown RBP13.82□□□□□ -0.2
BEST1-201ENST00000378043 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
BEST1-201ENST00000378043 NUDT16Q96DE0 195 aaKnown RBP13.82□□□□□ -0.2
BEST1-201ENST00000378043 BRPF3Q9ULD4 1205 aa13.82□□□□□ -0.2
BEST1-201ENST00000378043 C22orf23Q9BZE7 217 aa13.81□□□□□ -0.2
BEST1-201ENST00000378043 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
BEST1-201ENST00000378043 AKAP12Q02952 1782 aa13.81□□□□□ -0.2
BEST1-201ENST00000378043 MFAP1P55081 439 aaKnown RBP13.81□□□□□ -0.2
BEST1-201ENST00000378043 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
BEST1-201ENST00000378043 PIK3R4Q99570 1358 aa13.81□□□□□ -0.2
BEST1-201ENST00000378043 C3P01024 1663 aa13.8□□□□□ -0.2
BEST1-201ENST00000378043 RRS1Q15050 365 aaKnown RBP13.8□□□□□ -0.2
BEST1-201ENST00000378043 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
BEST1-201ENST00000378043 PTCH1Q13635 1447 aa13.8□□□□□ -0.2
BEST1-201ENST00000378043 ELL2O00472 640 aaPredicted RBP13.8□□□□□ -0.2
BEST1-201ENST00000378043 LNPKQ9C0E8 428 aa13.8□□□□□ -0.2
BEST1-201ENST00000378043 CCDC61Q9Y6R9 512 aa13.8□□□□□ -0.2
BEST1-201ENST00000378043 TECPR2O15040 1411 aa13.79□□□□□ -0.2
BEST1-201ENST00000378043 GNAI1P63096 354 aa13.79□□□□□ -0.2
BEST1-201ENST00000378043 ARHGAP45Q92619 1136 aa13.79□□□□□ -0.2
BEST1-201ENST00000378043 PRR36Q9H6K5 1346 aa13.79□□□□□ -0.2
BEST1-201ENST00000378043 CHD1LQ86WJ1 897 aa13.78□□□□□ -0.2
BEST1-201ENST00000378043 FAM83GA6ND36 823 aa13.78□□□□□ -0.2
BEST1-201ENST00000378043 CALD1Q05682 793 aaKnown RBP13.78□□□□□ -0.2
BEST1-201ENST00000378043 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
BEST1-201ENST00000378043 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.78□□□□□ -0.2
BEST1-201ENST00000378043 ITSN1Q15811 1721 aa13.78□□□□□ -0.2
BEST1-201ENST00000378043 SIRT2Q8IXJ6 389 aa13.77□□□□□ -0.2
BEST1-201ENST00000378043 COG3Q96JB2 828 aa13.77□□□□□ -0.2
BEST1-201ENST00000378043 C1orf115Q9H7X2 142 aa13.77□□□□□ -0.2
BEST1-201ENST00000378043 ABCC4O15439 1325 aa13.77□□□□□ -0.2
BEST1-201ENST00000378043 SIRT1Q96EB6 747 aa13.77□□□□□ -0.21
BEST1-201ENST00000378043 CFAP44Q96MT7 982 aa13.77□□□□□ -0.21
BEST1-201ENST00000378043 RTN4Q9NQC3 1192 aaKnown RBP13.77□□□□□ -0.21
BEST1-201ENST00000378043 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
BEST1-201ENST00000378043 SPRYD3Q8NCJ5 442 aa13.77□□□□□ -0.21
BEST1-201ENST00000378043 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
BEST1-201ENST00000378043 DCTN1Q14203 1278 aa13.76□□□□□ -0.21
BEST1-201ENST00000378043 ROBO2Q9HCK4 1378 aa13.74□□□□□ -0.21
BEST1-201ENST00000378043 RBM25P49756 843 aaKnown RBP13.74□□□□□ -0.21
BEST1-201ENST00000378043 NRKQ7Z2Y5 1582 aa13.74□□□□□ -0.21
BEST1-201ENST00000378043 BMP2KLQ5H9B9 411 aa13.74□□□□□ -0.21
BEST1-201ENST00000378043 ANKRD45Q5TZF3 282 aa13.74□□□□□ -0.21
BEST1-201ENST00000378043 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
BEST1-201ENST00000378043 GCC1Q96CN9 775 aa13.74□□□□□ -0.21
BEST1-201ENST00000378043 UBR1Q8IWV7 1749 aa13.73□□□□□ -0.21
BEST1-201ENST00000378043 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
BEST1-201ENST00000378043 LMOD3Q0VAK6 560 aa13.73□□□□□ -0.21
BEST1-201ENST00000378043 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
BEST1-201ENST00000378043 ADAMTS13Q76LX8 1427 aa13.72□□□□□ -0.21
BEST1-201ENST00000378043 TMEM2Q9UHN6 1383 aa13.72□□□□□ -0.21
BEST1-201ENST00000378043 EIF4A2Q14240 407 aaKnown RBP13.72□□□□□ -0.21
BEST1-201ENST00000378043 KIF13AQ9H1H9 1805 aa13.72□□□□□ -0.21
BEST1-201ENST00000378043 CHMP4BQ9H444 224 aaKnown RBP13.71□□□□□ -0.21
BEST1-201ENST00000378043 TNRQ92752 1358 aa13.71□□□□□ -0.21
BEST1-201ENST00000378043 TOPAZ1Q8N9V7 1692 aa13.71□□□□□ -0.21
BEST1-201ENST00000378043 PEAK1Q9H792 1746 aa13.71□□□□□ -0.22
BEST1-201ENST00000378043 KRT24Q2M2I5 525 aa13.7□□□□□ -0.22
BEST1-201ENST00000378043 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
BEST1-201ENST00000378043 KIF2CQ99661 725 aa13.7□□□□□ -0.22
BEST1-201ENST00000378043 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
BEST1-201ENST00000378043 TTC21BQ7Z4L5 1316 aa13.7□□□□□ -0.22
BEST1-201ENST00000378043 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
BEST1-201ENST00000378043 ESF1Q9H501 851 aaKnown RBP13.7□□□□□ -0.22
BEST1-201ENST00000378043 OVOS2A0A0J9YW53 1432 aa13.7□□□□□ -0.22
BEST1-201ENST00000378043 OVOS2Q6IE36 1432 aa13.7□□□□□ -0.22
BEST1-201ENST00000378043 MCM4P33991 863 aa13.7□□□□□ -0.22
BEST1-201ENST00000378043 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
BEST1-201ENST00000378043 CHMP5Q9NZZ3 219 aa13.7□□□□□ -0.22
BEST1-201ENST00000378043 ACEP12821 1306 aa13.69□□□□□ -0.22
BEST1-201ENST00000378043 RGPD1P0DJD0 1748 aa13.69□□□□□ -0.22
BEST1-201ENST00000378043 NALCNQ8IZF0 1738 aa13.69□□□□□ -0.22
BEST1-201ENST00000378043 DDIT3P35638 169 aa13.69□□□□□ -0.22
BEST1-201ENST00000378043 RGS12O14924 1447 aa13.69□□□□□ -0.22
BEST1-201ENST00000378043 NUTM2FA1L443 756 aa13.68□□□□□ -0.22
BEST1-201ENST00000378043 TBC1D9Q6ZT07 1266 aa13.68□□□□□ -0.22
BEST1-201ENST00000378043 SNX21Q969T3 373 aa13.68□□□□□ -0.22
BEST1-201ENST00000378043 CHL1O00533 1208 aa13.68□□□□□ -0.22
BEST1-201ENST00000378043 LTKP29376 864 aa13.68□□□□□ -0.22
BEST1-201ENST00000378043 HSP90AB2PQ58FF8 381 aa13.68□□□□□ -0.22
BEST1-201ENST00000378043 HSCBQ8IWL3 235 aa13.68□□□□□ -0.22
BEST1-201ENST00000378043 PLEKHG3A1L390 1219 aa13.67□□□□□ -0.22
BEST1-201ENST00000378043 INTS3Q68E01 1043 aaKnown RBP13.67□□□□□ -0.22
BEST1-201ENST00000378043 MCM10Q7L590 875 aa13.67□□□□□ -0.22
BEST1-201ENST00000378043 KIF24Q5T7B8 1368 aa13.67□□□□□ -0.22
BEST1-201ENST00000378043 USP6P35125 1406 aa13.67□□□□□ -0.22
BEST1-201ENST00000378043 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
BEST1-201ENST00000378043 DCTPP1Q9H773 170 aa13.66□□□□□ -0.22
BEST1-201ENST00000378043 ATP10DQ9P241 1426 aa13.66□□□□□ -0.22
BEST1-201ENST00000378043 GSPT1P15170 499 aaKnown RBP13.65□□□□□ -0.22
BEST1-201ENST00000378043 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
BEST1-201ENST00000378043 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
BEST1-201ENST00000378043 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
BEST1-201ENST00000378043 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
BEST1-201ENST00000378043 KIAA0232Q92628 1395 aa13.64□□□□□ -0.23
BEST1-201ENST00000378043 PLEKHG1Q9ULL1 1385 aa13.64□□□□□ -0.23
BEST1-201ENST00000378043 CRB1P82279 1406 aa13.64□□□□□ -0.23
BEST1-201ENST00000378043 RIMS1Q86UR5 1692 aaKnown RBP13.63□□□□□ -0.23
BEST1-201ENST00000378043 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
BEST1-201ENST00000378043 ANKRD44Q8N8A2 993 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms