RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ABCC6O95255 1503 aa20.9■□□□□ 0.94
HDAC6-204ENST00000376643 EZH2Q15910 746 aaKnown RBP20.9■□□□□ 0.94
HDAC6-204ENST00000376643 NBPF14Q5TI25 921 aa20.9■□□□□ 0.94
HDAC6-204ENST00000376643 DDB1Q16531 1140 aa20.89■□□□□ 0.93
HDAC6-204ENST00000376643 HDGFL2Q7Z4V5 671 aaPredicted RBP20.89■□□□□ 0.93
HDAC6-204ENST00000376643 ARHGEF25Q86VW2 580 aa20.89■□□□□ 0.93
HDAC6-204ENST00000376643 PUS7Q96PZ0 661 aaKnown RBP20.89■□□□□ 0.93
HDAC6-204ENST00000376643 CSB-PGBD3P0DP91 1061 aa20.88■□□□□ 0.93
HDAC6-204ENST00000376643 R3HDM1Q15032 1099 aaKnown RBP20.87■□□□□ 0.93
HDAC6-204ENST00000376643 TERF2IPQ9NYB0 399 aa20.86■□□□□ 0.93
HDAC6-204ENST00000376643 CCDC7Q96M83 1385 aa20.85■□□□□ 0.93
HDAC6-204ENST00000376643 CARD10Q9BWT7 1032 aa20.85■□□□□ 0.93
HDAC6-204ENST00000376643 USP31Q70CQ4 1352 aa20.85■□□□□ 0.93
HDAC6-204ENST00000376643 NINLQ9Y2I6 1382 aa20.85■□□□□ 0.93
HDAC6-204ENST00000376643 TMC1Q8TDI8 760 aa20.84■□□□□ 0.93
HDAC6-204ENST00000376643 MON2Q7Z3U7 1717 aa20.84■□□□□ 0.93
HDAC6-204ENST00000376643 COL18A1P39060 1754 aa20.83■□□□□ 0.93
HDAC6-204ENST00000376643 SOX12O15370 315 aa20.83■□□□□ 0.93
HDAC6-204ENST00000376643 BCL9O00512 1426 aa20.82■□□□□ 0.92
HDAC6-204ENST00000376643 EDC4Q6P2E9 1401 aaKnown RBP20.82■□□□□ 0.92
HDAC6-204ENST00000376643 AXIN2Q9Y2T1 843 aa20.82■□□□□ 0.92
HDAC6-204ENST00000376643 NFAT5O94916 1531 aa20.82■□□□□ 0.92
HDAC6-204ENST00000376643 LRRC37A3O60309 1634 aa20.82■□□□□ 0.92
HDAC6-204ENST00000376643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.81■□□□□ 0.92
HDAC6-204ENST00000376643 PLSCR1O15162 318 aa20.8■□□□□ 0.92
HDAC6-204ENST00000376643 RREB1Q92766 1687 aa20.8■□□□□ 0.92
HDAC6-204ENST00000376643 EXOC5O00471 708 aa20.79■□□□□ 0.92
HDAC6-204ENST00000376643 BCL11BQ9C0K0 894 aaPredicted RBP20.79■□□□□ 0.92
HDAC6-204ENST00000376643 USP54Q70EL1 1684 aa20.79■□□□□ 0.92
HDAC6-204ENST00000376643 RGPD3A6NKT7 1758 aaPredicted RBP20.78■□□□□ 0.92
HDAC6-204ENST00000376643 RGPD4Q7Z3J3 1758 aa20.78■□□□□ 0.92
HDAC6-204ENST00000376643 WNK3Q9BYP7 1800 aa20.77■□□□□ 0.92
HDAC6-204ENST00000376643 TRIM26Q12899 539 aaPredicted RBP20.77■□□□□ 0.92
HDAC6-204ENST00000376643 PEAK1Q9H792 1746 aa20.77■□□□□ 0.92
HDAC6-204ENST00000376643 CD163L1Q9NR16 1453 aa20.76■□□□□ 0.91
HDAC6-204ENST00000376643 NUP188Q5SRE5 1749 aa20.75■□□□□ 0.91
HDAC6-204ENST00000376643 NME9Q86XW9 330 aa20.75■□□□□ 0.91
HDAC6-204ENST00000376643 SLC12A5Q9H2X9 1139 aa20.75■□□□□ 0.91
HDAC6-204ENST00000376643 ERBB3P21860 1342 aa20.75■□□□□ 0.91
HDAC6-204ENST00000376643 A0A1W2PP64 1363 aa20.74■□□□□ 0.91
HDAC6-204ENST00000376643 TNS2Q63HR2 1409 aa20.74■□□□□ 0.91
HDAC6-204ENST00000376643 MARCH10Q8NA82 808 aaPredicted RBP20.73■□□□□ 0.91
HDAC6-204ENST00000376643 NLRP2Q9NX02 1062 aa20.72■□□□□ 0.91
HDAC6-204ENST00000376643 SPON1Q9HCB6 807 aa20.71■□□□□ 0.91
HDAC6-204ENST00000376643 ST20-MTHFSA0A0A6YYL1 179 aa20.7■□□□□ 0.9
HDAC6-204ENST00000376643 IL2RBP14784 551 aa20.7■□□□□ 0.9
HDAC6-204ENST00000376643 CDCA8Q53HL2 280 aa20.7■□□□□ 0.9
HDAC6-204ENST00000376643 RGPD5Q99666 1765 aa20.69■□□□□ 0.9
HDAC6-204ENST00000376643 ANKRD24Q8TF21 1146 aa20.69■□□□□ 0.9
HDAC6-204ENST00000376643 COG3Q96JB2 828 aa20.69■□□□□ 0.9
HDAC6-204ENST00000376643 TESK2Q96S53 571 aa20.69■□□□□ 0.9
HDAC6-204ENST00000376643 SBF2Q86WG5 1849 aa20.69■□□□□ 0.9
HDAC6-204ENST00000376643 TMF1P82094 1093 aa20.68■□□□□ 0.9
HDAC6-204ENST00000376643 PPP1R1BQ9UD71 204 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-204ENST00000376643 LTN1O94822 1766 aa20.67■□□□□ 0.9
HDAC6-204ENST00000376643 KCNQ2O43526 872 aa20.66■□□□□ 0.9
HDAC6-204ENST00000376643 IP6K1Q92551 441 aa20.66■□□□□ 0.9
HDAC6-204ENST00000376643 ANKRD36BQ8N2N9 1353 aa20.66■□□□□ 0.9
HDAC6-204ENST00000376643 DCAF8L1A6NGE4 600 aa20.65■□□□□ 0.9
HDAC6-204ENST00000376643 FAM208AQ9UK61 1670 aaKnown RBP20.64■□□□□ 0.9
HDAC6-204ENST00000376643 STK32BQ9NY57 414 aa20.64■□□□□ 0.89
HDAC6-204ENST00000376643 TIMELESSQ9UNS1 1208 aa20.64■□□□□ 0.89
HDAC6-204ENST00000376643 USP47Q96K76 1375 aa20.63■□□□□ 0.89
HDAC6-204ENST00000376643 TXNRD1Q16881 649 aa20.62■□□□□ 0.89
HDAC6-204ENST00000376643 RTL1A6NKG5 1358 aa20.61■□□□□ 0.89
HDAC6-204ENST00000376643 AMPHP49418 695 aa20.61■□□□□ 0.89
HDAC6-204ENST00000376643 NHSQ6T4R5 1651 aa20.61■□□□□ 0.89
HDAC6-204ENST00000376643 CLSPNQ9HAW4 1339 aa20.59■□□□□ 0.89
HDAC6-204ENST00000376643 SMG6Q86US8 1419 aaKnown RBP20.59■□□□□ 0.89
HDAC6-204ENST00000376643 PTF1AQ7RTS3 328 aa20.58■□□□□ 0.89
HDAC6-204ENST00000376643 ANO8Q9HCE9 1232 aaPredicted RBP20.58■□□□□ 0.89
HDAC6-204ENST00000376643 MAP3K19Q56UN5 1328 aa20.57■□□□□ 0.88
HDAC6-204ENST00000376643 HOXC9P31274 260 aa20.57■□□□□ 0.88
HDAC6-204ENST00000376643 SLC15A2Q16348 729 aa20.57■□□□□ 0.88
HDAC6-204ENST00000376643 PROM2Q8N271 834 aa20.57■□□□□ 0.88
HDAC6-204ENST00000376643 LTV1Q96GA3 475 aaPredicted RBP20.56■□□□□ 0.88
HDAC6-204ENST00000376643 CGNL1Q0VF96 1302 aa20.55■□□□□ 0.88
HDAC6-204ENST00000376643 ACSBG1Q96GR2 724 aa20.55■□□□□ 0.88
HDAC6-204ENST00000376643 HMGB2P26583 209 aaKnown RBP20.54■□□□□ 0.88
HDAC6-204ENST00000376643 KIF24Q5T7B8 1368 aa20.54■□□□□ 0.88
HDAC6-204ENST00000376643 CASZ1Q86V15 1759 aa20.52■□□□□ 0.88
HDAC6-204ENST00000376643 FYB1O15117 783 aa20.52■□□□□ 0.88
HDAC6-204ENST00000376643 SLC27A3Q5K4L6 730 aa20.52■□□□□ 0.88
HDAC6-204ENST00000376643 DDX54Q8TDD1 881 aaKnown RBP20.52■□□□□ 0.88
HDAC6-204ENST00000376643 MTFR1LQ9H019 292 aa20.51■□□□□ 0.87
HDAC6-204ENST00000376643 ZCRB1Q8TBF4 217 aaKnown RBP20.5■□□□□ 0.87
HDAC6-204ENST00000376643 GGNBP2Q9H3C7 697 aa20.5■□□□□ 0.87
HDAC6-204ENST00000376643 ZBTB7AO95365 584 aa20.49■□□□□ 0.87
HDAC6-204ENST00000376643 RAPGEF4Q8WZA2 1011 aa20.49■□□□□ 0.87
HDAC6-204ENST00000376643 FLT4P35916 1363 aa20.48■□□□□ 0.87
HDAC6-204ENST00000376643 BTAF1O14981 1849 aa20.48■□□□□ 0.87
HDAC6-204ENST00000376643 INSRP06213 1382 aa20.47■□□□□ 0.87
HDAC6-204ENST00000376643 RRS1Q15050 365 aaKnown RBP20.47■□□□□ 0.87
HDAC6-204ENST00000376643 SYTL4Q96C24 671 aaPredicted RBP20.46■□□□□ 0.87
HDAC6-204ENST00000376643 TATP17735 454 aaPredicted RBP20.45■□□□□ 0.86
HDAC6-204ENST00000376643 SLC16A10Q8TF71 515 aa20.45■□□□□ 0.86
HDAC6-204ENST00000376643 KAT6BQ8WYB5 2073 aa20.44■□□□□ 0.86
HDAC6-204ENST00000376643 KIF20BQ96Q89 1820 aa20.44■□□□□ 0.86
HDAC6-204ENST00000376643 YY1P25490 414 aa20.44■□□□□ 0.86
HDAC6-204ENST00000376643 PTGER2P43116 358 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms