RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 PLEKHO1Q53GL0 409 aaPredicted RBP25.21■■□□□ 1.63
TGFBR1-202ENST00000374994 CDK19Q9BWU1 502 aa25.21■■□□□ 1.63
TGFBR1-202ENST00000374994 CDK13Q14004 1512 aaKnown RBP25.21■■□□□ 1.63
TGFBR1-202ENST00000374994 HDGFL1Q5TGJ6 251 aa25.2■■□□□ 1.63
TGFBR1-202ENST00000374994 CABP1Q9NZU7 370 aa25.2■■□□□ 1.63
TGFBR1-202ENST00000374994 FOSBP53539 338 aa25.2■■□□□ 1.62
TGFBR1-202ENST00000374994 PLEKHH1Q9ULM0 1364 aa25.2■■□□□ 1.62
TGFBR1-202ENST00000374994 SULT6B1Q6IMI4 303 aa25.2■■□□□ 1.62
TGFBR1-202ENST00000374994 PDCL2Q8N4E4 241 aa25.2■■□□□ 1.62
TGFBR1-202ENST00000374994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.19■■□□□ 1.62
TGFBR1-202ENST00000374994 LARP1BQ659C4 914 aaKnown RBP25.19■■□□□ 1.62
TGFBR1-202ENST00000374994 PDILTQ8N807 584 aa25.19■■□□□ 1.62
TGFBR1-202ENST00000374994 CAMSAP2Q08AD1 1489 aa25.19■■□□□ 1.62
TGFBR1-202ENST00000374994 SART3Q15020 963 aaKnown RBP25.18■■□□□ 1.62
TGFBR1-202ENST00000374994 FILIP1LQ4L180 1135 aa25.18■■□□□ 1.62
TGFBR1-202ENST00000374994 AIMP1Q12904 312 aaKnown RBP25.18■■□□□ 1.62
TGFBR1-202ENST00000374994 SMARCE1Q969G3 411 aa25.18■■□□□ 1.62
TGFBR1-202ENST00000374994 SPC24Q8NBT2 197 aa25.18■■□□□ 1.62
TGFBR1-202ENST00000374994 NUP62CLQ9H1M0 184 aa25.17■■□□□ 1.62
TGFBR1-202ENST00000374994 CFAP45Q9UL16 551 aa25.17■■□□□ 1.62
TGFBR1-202ENST00000374994 CUL7Q14999 1698 aa25.17■■□□□ 1.62
TGFBR1-202ENST00000374994 OSCARQ8IYS5 282 aa25.16■■□□□ 1.62
TGFBR1-202ENST00000374994 KRT32Q14532 448 aa25.16■■□□□ 1.62
TGFBR1-202ENST00000374994 VPS53Q5VIR6 699 aa25.16■■□□□ 1.62
TGFBR1-202ENST00000374994 SSH1Q8WYL5 1049 aa25.16■■□□□ 1.62
TGFBR1-202ENST00000374994 G3V3G9 751 aa25.16■■□□□ 1.62
TGFBR1-202ENST00000374994 MCM5P33992 734 aa25.16■■□□□ 1.62
TGFBR1-202ENST00000374994 DCAF8Q5TAQ9 597 aa25.16■■□□□ 1.62
TGFBR1-202ENST00000374994 PDRG1Q9NUG6 133 aa25.15■■□□□ 1.62
TGFBR1-202ENST00000374994 MAPKBP1O60336 1514 aa25.15■■□□□ 1.62
TGFBR1-202ENST00000374994 BLOC1S2Q6QNY1 142 aa25.15■■□□□ 1.62
TGFBR1-202ENST00000374994 CEP57L1Q8IYX8 460 aa25.14■■□□□ 1.62
TGFBR1-202ENST00000374994 TBC1D2BQ9UPU7 963 aa25.14■■□□□ 1.62
TGFBR1-202ENST00000374994 TBC1D32Q96NH3 1257 aa25.14■■□□□ 1.61
TGFBR1-202ENST00000374994 DACH1Q9UI36 760 aa25.14■■□□□ 1.61
TGFBR1-202ENST00000374994 SPATA32Q96LK8 384 aa25.13■■□□□ 1.61
TGFBR1-202ENST00000374994 CBFA2T2O43439 604 aa25.13■■□□□ 1.61
TGFBR1-202ENST00000374994 KIF2AO00139 706 aaPredicted RBP25.13■■□□□ 1.61
TGFBR1-202ENST00000374994 IQGAP2Q13576 1575 aa25.13■■□□□ 1.61
TGFBR1-202ENST00000374994 RTEL1-TNFRSF6BF6WH68 1400 aa25.13■■□□□ 1.61
TGFBR1-202ENST00000374994 TNPO1Q92973 898 aaKnown RBP25.12■■□□□ 1.61
TGFBR1-202ENST00000374994 BMP2KLQ5H9B9 411 aa25.12■■□□□ 1.61
TGFBR1-202ENST00000374994 SYCE3A1L190 88 aa25.12■■□□□ 1.61
TGFBR1-202ENST00000374994 DNAJC2Q99543 621 aaKnown RBP25.12■■□□□ 1.61
TGFBR1-202ENST00000374994 VPS37DQ86XT2 251 aa25.11■■□□□ 1.61
TGFBR1-202ENST00000374994 EVA1CP58658 441 aa25.11■■□□□ 1.61
TGFBR1-202ENST00000374994 NSD2O96028 1365 aa25.11■■□□□ 1.61
TGFBR1-202ENST00000374994 MAP3K11Q16584 847 aa25.1■■□□□ 1.61
TGFBR1-202ENST00000374994 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
TGFBR1-202ENST00000374994 FMNL2Q96PY5 1086 aa25.1■■□□□ 1.61
TGFBR1-202ENST00000374994 ME1P48163 572 aa25.09■■□□□ 1.61
TGFBR1-202ENST00000374994 CCDC183Q5T5S1 534 aa25.08■■□□□ 1.61
TGFBR1-202ENST00000374994 LEKR1Q6ZMV7 388 aa25.08■■□□□ 1.61
TGFBR1-202ENST00000374994 RAB11FIP3O75154 756 aa25.08■■□□□ 1.61
TGFBR1-202ENST00000374994 SERPINC1P01008 464 aa25.08■■□□□ 1.6
TGFBR1-202ENST00000374994 MX1P20591 662 aa25.08■■□□□ 1.6
TGFBR1-202ENST00000374994 CAGE1Q8TC20 777 aa25.08■■□□□ 1.6
TGFBR1-202ENST00000374994 JAKMIP1Q96N16 626 aaKnown RBP25.08■■□□□ 1.6
TGFBR1-202ENST00000374994 SRGAP3O43295 1099 aa25.07■■□□□ 1.6
TGFBR1-202ENST00000374994 SCAF11Q99590 1463 aaKnown RBP25.07■■□□□ 1.6
TGFBR1-202ENST00000374994 NLRP2Q9NX02 1062 aa25.07■■□□□ 1.6
TGFBR1-202ENST00000374994 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
TGFBR1-202ENST00000374994 ERLIN1O75477 346 aa25.06■■□□□ 1.6
TGFBR1-202ENST00000374994 NESP48681 1621 aa25.06■■□□□ 1.6
TGFBR1-202ENST00000374994 IL16Q14005 1332 aa25.06■■□□□ 1.6
TGFBR1-202ENST00000374994 SH2B1Q9NRF2 756 aaPredicted RBP25.06■■□□□ 1.6
TGFBR1-202ENST00000374994 PDCL3Q9H2J4 239 aa25.06■■□□□ 1.6
TGFBR1-202ENST00000374994 NAP1L1P55209 391 aaKnown RBP25.05■■□□□ 1.6
TGFBR1-202ENST00000374994 KLHL40Q2TBA0 621 aa25.05■■□□□ 1.6
TGFBR1-202ENST00000374994 TAF3Q5VWG9 929 aa25.05■■□□□ 1.6
TGFBR1-202ENST00000374994 SKAP1Q86WV1 359 aa25.05■■□□□ 1.6
TGFBR1-202ENST00000374994 SCAND2PQ9GZW5 306 aaPredicted RBP25.05■■□□□ 1.6
TGFBR1-202ENST00000374994 CCDC158Q5M9N0 1113 aa25.05■■□□□ 1.6
TGFBR1-202ENST00000374994 ABTB2Q8N961 1025 aa25.05■■□□□ 1.6
TGFBR1-202ENST00000374994 TXLNAP40222 546 aa25.04■■□□□ 1.6
TGFBR1-202ENST00000374994 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.04■■□□□ 1.6
TGFBR1-202ENST00000374994 SMTNL1A8MU46 457 aa25.03■■□□□ 1.6
TGFBR1-202ENST00000374994 TRIM27P14373 513 aa25.03■■□□□ 1.6
TGFBR1-202ENST00000374994 SSFA2P28290 1259 aa25.03■■□□□ 1.6
TGFBR1-202ENST00000374994 PDE4CQ08493 712 aa25.03■■□□□ 1.6
TGFBR1-202ENST00000374994 KIF1BPQ96EK5 621 aa25.03■■□□□ 1.6
TGFBR1-202ENST00000374994 GLRX3O76003 335 aaKnown RBP25.03■■□□□ 1.6
TGFBR1-202ENST00000374994 HDAC1Q13547 482 aaPredicted RBP25.03■■□□□ 1.6
TGFBR1-202ENST00000374994 CEBPZQ03701 1054 aaKnown RBP25.03■■□□□ 1.6
TGFBR1-202ENST00000374994 CTNNA3Q9UI47 895 aa25.03■■□□□ 1.6
TGFBR1-202ENST00000374994 CDKL5O76039 1030 aa25.02■■□□□ 1.6
TGFBR1-202ENST00000374994 DCTN1Q14203 1278 aa25.02■■□□□ 1.6
TGFBR1-202ENST00000374994 EIF3JO75822 258 aaKnown RBP25.02■■□□□ 1.6
TGFBR1-202ENST00000374994 PPFIBP1Q86W92 1011 aa25.02■■□□□ 1.6
TGFBR1-202ENST00000374994 CC2D2AQ9P2K1 1620 aa25.02■■□□□ 1.6
TGFBR1-202ENST00000374994 AACSQ86V21 672 aa25.02■■□□□ 1.6
TGFBR1-202ENST00000374994 UPF3BQ9BZI7 483 aaKnown RBP25.02■■□□□ 1.6
TGFBR1-202ENST00000374994 TRIM22Q8IYM9 498 aa25.01■■□□□ 1.59
TGFBR1-202ENST00000374994 RALGAPBQ86X10 1494 aa25.01■■□□□ 1.59
TGFBR1-202ENST00000374994 CWC27Q6UX04 472 aaKnown RBP25■■□□□ 1.59
TGFBR1-202ENST00000374994 TXNDC2Q86VQ3 553 aa25■■□□□ 1.59
TGFBR1-202ENST00000374994 OFD1O75665 1012 aa25■■□□□ 1.59
TGFBR1-202ENST00000374994 MAGEC2Q9UBF1 373 aaPredicted RBP25■■□□□ 1.59
TGFBR1-202ENST00000374994 STK3Q13188 491 aa25■■□□□ 1.59
TGFBR1-202ENST00000374994 MYO6Q9UM54 1294 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms