RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-203ENST00000374429 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
CXCL12-203ENST00000374429 ORAI2Q96SN7 254 aa13.56□□□□□ -0.24
CXCL12-203ENST00000374429 INSRP06213 1382 aa13.56□□□□□ -0.24
CXCL12-203ENST00000374429 TULP4Q9NRJ4 1543 aa13.56□□□□□ -0.24
CXCL12-203ENST00000374429 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
CXCL12-203ENST00000374429 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
CXCL12-203ENST00000374429 VAMP4O75379 141 aa13.55□□□□□ -0.24
CXCL12-203ENST00000374429 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-203ENST00000374429 AIMP1Q12904 312 aaKnown RBP13.55□□□□□ -0.24
CXCL12-203ENST00000374429 MTHFSDQ2M296 383 aaKnown RBP13.55□□□□□ -0.24
CXCL12-203ENST00000374429 DIP2CQ9Y2E4 1556 aa13.55□□□□□ -0.24
CXCL12-203ENST00000374429 DTNBO60941 627 aa13.55□□□□□ -0.24
CXCL12-203ENST00000374429 FOXD4L6Q3SYB3 417 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-203ENST00000374429 FOXD4L3Q6VB84 417 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-203ENST00000374429 G2E3Q7L622 706 aa13.55□□□□□ -0.24
CXCL12-203ENST00000374429 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
CXCL12-203ENST00000374429 NPC1L1Q9UHC9 1359 aa13.55□□□□□ -0.24
CXCL12-203ENST00000374429 SETD1BQ9UPS6 1966 aaKnown RBP13.55□□□□□ -0.24
CXCL12-203ENST00000374429 GLI2P10070 1586 aa13.54□□□□□ -0.24
CXCL12-203ENST00000374429 MPRIPQ6WCQ1 1025 aa13.54□□□□□ -0.24
CXCL12-203ENST00000374429 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
CXCL12-203ENST00000374429 ZNF692Q9BU19 519 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-203ENST00000374429 MAP4K4O95819 1239 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-203ENST00000374429 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-203ENST00000374429 EYA1Q99502 592 aa13.53□□□□□ -0.24
CXCL12-203ENST00000374429 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
CXCL12-203ENST00000374429 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
CXCL12-203ENST00000374429 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-203ENST00000374429 STK31Q9BXU1 1019 aa13.52□□□□□ -0.25
CXCL12-203ENST00000374429 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.25
CXCL12-203ENST00000374429 BECN1Q14457 450 aa13.52□□□□□ -0.25
CXCL12-203ENST00000374429 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-203ENST00000374429 MEIS3Q99687 375 aa13.52□□□□□ -0.25
CXCL12-203ENST00000374429 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
CXCL12-203ENST00000374429 IQGAP1P46940 1657 aa13.52□□□□□ -0.25
CXCL12-203ENST00000374429 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
CXCL12-203ENST00000374429 ADGRB1O14514 1584 aa13.51□□□□□ -0.25
CXCL12-203ENST00000374429 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
CXCL12-203ENST00000374429 PDE4CQ08493 712 aa13.51□□□□□ -0.25
CXCL12-203ENST00000374429 C22orf23Q9BZE7 217 aa13.51□□□□□ -0.25
CXCL12-203ENST00000374429 QRICH2Q9H0J4 1663 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 A2ML1A8K2U0 1454 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 RILPL2Q969X0 211 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 TRIM6-TRIM34B2RNG4 842 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 CALD1Q05682 793 aaKnown RBP13.5□□□□□ -0.25
CXCL12-203ENST00000374429 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 TMEM2Q9UHN6 1383 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 SIGLEC1Q9BZZ2 1709 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 IL1RAPL2Q9NP60 686 aa13.5□□□□□ -0.25
CXCL12-203ENST00000374429 CAMSAP1Q5T5Y3 1602 aa13.49□□□□□ -0.25
CXCL12-203ENST00000374429 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
CXCL12-203ENST00000374429 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
CXCL12-203ENST00000374429 CFAP44Q96MT7 982 aa13.49□□□□□ -0.25
CXCL12-203ENST00000374429 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
CXCL12-203ENST00000374429 VWDEQ8N2E2 1590 aa13.49□□□□□ -0.25
CXCL12-203ENST00000374429 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
CXCL12-203ENST00000374429 OS9Q13438 667 aaPredicted RBP13.49□□□□□ -0.25
CXCL12-203ENST00000374429 CHD1LQ86WJ1 897 aa13.48□□□□□ -0.25
CXCL12-203ENST00000374429 MRPL50Q8N5N7 158 aaKnown RBP13.48□□□□□ -0.25
CXCL12-203ENST00000374429 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
CXCL12-203ENST00000374429 CCDC27Q2M243 656 aa13.48□□□□□ -0.25
CXCL12-203ENST00000374429 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
CXCL12-203ENST00000374429 PHF8Q9UPP1 1060 aa13.48□□□□□ -0.25
CXCL12-203ENST00000374429 TEFQ10587 303 aa13.47□□□□□ -0.25
CXCL12-203ENST00000374429 NCLP19338 710 aaKnown RBP13.47□□□□□ -0.25
CXCL12-203ENST00000374429 LGR6Q9HBX8 967 aa13.47□□□□□ -0.25
CXCL12-203ENST00000374429 PTPRMP28827 1452 aa13.47□□□□□ -0.25
CXCL12-203ENST00000374429 DEPDC5O75140 1603 aa13.47□□□□□ -0.25
CXCL12-203ENST00000374429 ALKQ9UM73 1620 aa13.47□□□□□ -0.25
CXCL12-203ENST00000374429 KCNQ3O43525 872 aa13.47□□□□□ -0.25
CXCL12-203ENST00000374429 BRPF3Q9ULD4 1205 aa13.47□□□□□ -0.25
CXCL12-203ENST00000374429 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.25
CXCL12-203ENST00000374429 PHAXQ9H814 394 aaKnown RBP13.46□□□□□ -0.26
CXCL12-203ENST00000374429 NSD2O96028 1365 aa13.45□□□□□ -0.26
CXCL12-203ENST00000374429 IFT57Q9NWB7 429 aa13.45□□□□□ -0.26
CXCL12-203ENST00000374429 MYL6BP14649 208 aa13.45□□□□□ -0.26
CXCL12-203ENST00000374429 SLC39A6Q13433 755 aa13.45□□□□□ -0.26
CXCL12-203ENST00000374429 ZBTB7BO15156 539 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-203ENST00000374429 HDGFL1Q5TGJ6 251 aa13.44□□□□□ -0.26
CXCL12-203ENST00000374429 ZNF530Q6P9A1 599 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-203ENST00000374429 LARP6Q9BRS8 491 aaKnown RBP13.44□□□□□ -0.26
CXCL12-203ENST00000374429 TBC1D2Q9BYX2 928 aa13.44□□□□□ -0.26
CXCL12-203ENST00000374429 HSCBQ8IWL3 235 aa13.44□□□□□ -0.26
CXCL12-203ENST00000374429 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
CXCL12-203ENST00000374429 MYOM1P52179 1685 aa13.44□□□□□ -0.26
CXCL12-203ENST00000374429 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
CXCL12-203ENST00000374429 CLTCQ00610 1675 aaKnown RBP13.43□□□□□ -0.26
CXCL12-203ENST00000374429 KAT6BQ8WYB5 2073 aa13.43□□□□□ -0.26
CXCL12-203ENST00000374429 NBPF6Q5VWK0 638 aa13.42□□□□□ -0.26
CXCL12-203ENST00000374429 SIRT2Q8IXJ6 389 aa13.42□□□□□ -0.26
CXCL12-203ENST00000374429 NBPF4Q96M43 638 aa13.42□□□□□ -0.26
CXCL12-203ENST00000374429 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
CXCL12-203ENST00000374429 PRAMEF22A3QJZ6 481 aa13.42□□□□□ -0.26
CXCL12-203ENST00000374429 NUTM1Q86Y26 1132 aa13.42□□□□□ -0.26
CXCL12-203ENST00000374429 LMTK2Q8IWU2 1503 aa13.41□□□□□ -0.26
CXCL12-203ENST00000374429 STRN4Q9NRL3 753 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms