RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 HMOX1P09601 288 aa17.18■□□□□ 0.34
A1CF-204ENST00000373997 ATF3P18847 181 aa17.18■□□□□ 0.34
A1CF-204ENST00000373997 IL13P35225 146 aa17.18■□□□□ 0.34
A1CF-204ENST00000373997 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
A1CF-204ENST00000373997 RTL5Q5HYW3 569 aaPredicted RBP17.18■□□□□ 0.34
A1CF-204ENST00000373997 DUSP27Q5VZP5 1158 aa17.18■□□□□ 0.34
A1CF-204ENST00000373997 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
A1CF-204ENST00000373997 MST1RQ04912 1400 aa17.17■□□□□ 0.34
A1CF-204ENST00000373997 SLFN5Q08AF3 891 aa17.17■□□□□ 0.34
A1CF-204ENST00000373997 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
A1CF-204ENST00000373997 DCCP43146 1447 aa17.17■□□□□ 0.34
A1CF-204ENST00000373997 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
A1CF-204ENST00000373997 FOXO3O43524 673 aa17.17■□□□□ 0.34
A1CF-204ENST00000373997 CRBNQ96SW2 442 aa17.17■□□□□ 0.34
A1CF-204ENST00000373997 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
A1CF-204ENST00000373997 NCOA3Q9Y6Q9 1424 aa17.16■□□□□ 0.34
A1CF-204ENST00000373997 PRKAR2BP31323 418 aa17.15■□□□□ 0.34
A1CF-204ENST00000373997 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
A1CF-204ENST00000373997 ZNF335Q9H4Z2 1342 aaPredicted RBP17.15■□□□□ 0.34
A1CF-204ENST00000373997 PNNQ9H307 717 aaKnown RBP17.15■□□□□ 0.34
A1CF-204ENST00000373997 MSH6P52701 1360 aa17.15■□□□□ 0.34
A1CF-204ENST00000373997 PLIN1O60240 522 aa17.14■□□□□ 0.33
A1CF-204ENST00000373997 FCHSD2O94868 740 aa17.14■□□□□ 0.33
A1CF-204ENST00000373997 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
A1CF-204ENST00000373997 HSP90AB2PQ58FF8 381 aa17.14■□□□□ 0.33
A1CF-204ENST00000373997 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
A1CF-204ENST00000373997 E9PSI1 815 aa17.14■□□□□ 0.33
A1CF-204ENST00000373997 FLT4P35916 1363 aa17.13■□□□□ 0.33
A1CF-204ENST00000373997 TMPOP42166 694 aaKnown RBP17.13■□□□□ 0.33
A1CF-204ENST00000373997 ALS2Q96Q42 1657 aa17.13■□□□□ 0.33
A1CF-204ENST00000373997 AMPHP49418 695 aa17.12■□□□□ 0.33
A1CF-204ENST00000373997 PHF23Q9BUL5 403 aaPredicted RBP17.12■□□□□ 0.33
A1CF-204ENST00000373997 NFAT5O94916 1531 aa17.12■□□□□ 0.33
A1CF-204ENST00000373997 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
A1CF-204ENST00000373997 NEFMP07197 916 aa17.12■□□□□ 0.33
A1CF-204ENST00000373997 CCDC27Q2M243 656 aa17.12■□□□□ 0.33
A1CF-204ENST00000373997 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
A1CF-204ENST00000373997 NPM2Q86SE8 214 aaKnown RBP17.11■□□□□ 0.33
A1CF-204ENST00000373997 TRMT2AQ8IZ69 625 aaKnown RBP17.11■□□□□ 0.33
A1CF-204ENST00000373997 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
A1CF-204ENST00000373997 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
A1CF-204ENST00000373997 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
A1CF-204ENST00000373997 KDM2BQ8NHM5 1336 aa17.1■□□□□ 0.33
A1CF-204ENST00000373997 CENPQQ7L2Z9 268 aaPredicted RBP17.1■□□□□ 0.33
A1CF-204ENST00000373997 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
A1CF-204ENST00000373997 DDRGK1Q96HY6 314 aa17.1■□□□□ 0.33
A1CF-204ENST00000373997 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
A1CF-204ENST00000373997 RIPK4P57078 832 aa17.09■□□□□ 0.33
A1CF-204ENST00000373997 RGPD2P0DJD1 1756 aa17.09■□□□□ 0.33
A1CF-204ENST00000373997 AEBP1Q8IUX7 1158 aa17.09■□□□□ 0.33
A1CF-204ENST00000373997 WDR63Q8IWG1 891 aa17.09■□□□□ 0.33
A1CF-204ENST00000373997 PHACTR3Q96KR7 559 aa17.09■□□□□ 0.33
A1CF-204ENST00000373997 DDX17Q92841 729 aaKnown RBP17.08■□□□□ 0.33
A1CF-204ENST00000373997 TRIM35Q9UPQ4 493 aa17.08■□□□□ 0.33
A1CF-204ENST00000373997 SULT6B1Q6IMI4 303 aa17.08■□□□□ 0.32
A1CF-204ENST00000373997 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
A1CF-204ENST00000373997 SLIT3O75094 1523 aa17.07■□□□□ 0.32
A1CF-204ENST00000373997 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
A1CF-204ENST00000373997 PHRF1Q9P1Y6 1649 aaKnown RBP17.07■□□□□ 0.32
A1CF-204ENST00000373997 HOXC9P31274 260 aa17.06■□□□□ 0.32
A1CF-204ENST00000373997 NFE2L2Q16236 605 aa17.06■□□□□ 0.32
A1CF-204ENST00000373997 C20orf194Q5TEA3 1177 aa17.06■□□□□ 0.32
A1CF-204ENST00000373997 ARHGEF10O15013 1369 aa17.05■□□□□ 0.32
A1CF-204ENST00000373997 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
A1CF-204ENST00000373997 KIF24Q5T7B8 1368 aa17.05■□□□□ 0.32
A1CF-204ENST00000373997 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
A1CF-204ENST00000373997 KCNH5Q8NCM2 988 aa17.03■□□□□ 0.32
A1CF-204ENST00000373997 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
A1CF-204ENST00000373997 MYH16Q9H6N6 1097 aa17.03■□□□□ 0.32
A1CF-204ENST00000373997 PXDNQ92626 1479 aa17.02■□□□□ 0.32
A1CF-204ENST00000373997 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.32
A1CF-204ENST00000373997 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.32
A1CF-204ENST00000373997 TSR2Q969E8 191 aaKnown RBP17.02■□□□□ 0.31
A1CF-204ENST00000373997 EYA1Q99502 592 aa17.02■□□□□ 0.31
A1CF-204ENST00000373997 USP19O94966 1318 aa17.01■□□□□ 0.31
A1CF-204ENST00000373997 GCP02774 474 aa17■□□□□ 0.31
A1CF-204ENST00000373997 THUMPD2Q9BTF0 503 aaKnown RBP17■□□□□ 0.31
A1CF-204ENST00000373997 IGSF1Q8N6C5 1336 aa17■□□□□ 0.31
A1CF-204ENST00000373997 TNS3Q68CZ2 1445 aa17■□□□□ 0.31
A1CF-204ENST00000373997 BRINP3Q76B58 766 aa17■□□□□ 0.31
A1CF-204ENST00000373997 IP6K1Q92551 441 aa16.99■□□□□ 0.31
A1CF-204ENST00000373997 FAM161AQ3B820 660 aa16.99■□□□□ 0.31
A1CF-204ENST00000373997 IL16Q14005 1332 aa16.99■□□□□ 0.31
A1CF-204ENST00000373997 KDRP35968 1356 aa16.99■□□□□ 0.31
A1CF-204ENST00000373997 BCAR3O75815 825 aa16.98■□□□□ 0.31
A1CF-204ENST00000373997 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
A1CF-204ENST00000373997 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
A1CF-204ENST00000373997 LMOD3Q0VAK6 560 aa16.97■□□□□ 0.31
A1CF-204ENST00000373997 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
A1CF-204ENST00000373997 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
A1CF-204ENST00000373997 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.31
A1CF-204ENST00000373997 DCTN1Q14203 1278 aa16.96■□□□□ 0.3
A1CF-204ENST00000373997 ARHGEF25Q86VW2 580 aa16.96■□□□□ 0.3
A1CF-204ENST00000373997 EXOSC9Q06265 439 aaKnown RBP16.95■□□□□ 0.3
A1CF-204ENST00000373997 SKAP1Q86WV1 359 aa16.95■□□□□ 0.3
A1CF-204ENST00000373997 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
A1CF-204ENST00000373997 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
A1CF-204ENST00000373997 ABCA3Q99758 1704 aa16.94■□□□□ 0.3
A1CF-204ENST00000373997 SPATA31A3Q5VYP0 1347 aa16.94■□□□□ 0.3
A1CF-204ENST00000373997 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms