RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 XRCC6P12956 609 aaKnown RBP eCLIP18.23■□□□□ 0.51
A1CF-202ENST00000373993 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
A1CF-202ENST00000373993 ITSN1Q15811 1721 aa18.22■□□□□ 0.51
A1CF-202ENST00000373993 ATP7BP35670 1465 aa18.21■□□□□ 0.51
A1CF-202ENST00000373993 USP19O94966 1318 aa18.21■□□□□ 0.51
A1CF-202ENST00000373993 RBM6P78332 1123 aaKnown RBP18.21■□□□□ 0.51
A1CF-202ENST00000373993 CALD1Q05682 793 aaKnown RBP18.21■□□□□ 0.51
A1CF-202ENST00000373993 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
A1CF-202ENST00000373993 CDK19Q9BWU1 502 aa18.21■□□□□ 0.51
A1CF-202ENST00000373993 RGS12O14924 1447 aa18.21■□□□□ 0.51
A1CF-202ENST00000373993 NUDT16Q96DE0 195 aaKnown RBP18.21■□□□□ 0.5
A1CF-202ENST00000373993 MAP7D2Q96T17 732 aa18.21■□□□□ 0.5
A1CF-202ENST00000373993 GPRASP1Q5JY77 1395 aa18.2■□□□□ 0.5
A1CF-202ENST00000373993 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
A1CF-202ENST00000373993 ABCA3Q99758 1704 aa18.2■□□□□ 0.5
A1CF-202ENST00000373993 TRPM3Q9HCF6 1732 aaPredicted RBP18.2■□□□□ 0.5
A1CF-202ENST00000373993 SBNO1A3KN83 1393 aa18.2■□□□□ 0.5
A1CF-202ENST00000373993 FNBP4Q8N3X1 1017 aaPredicted RBP18.19■□□□□ 0.5
A1CF-202ENST00000373993 TRPC5Q9UL62 973 aaPredicted RBP18.19■□□□□ 0.5
A1CF-202ENST00000373993 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
A1CF-202ENST00000373993 CDCA7LQ96GN5 454 aa18.19■□□□□ 0.5
A1CF-202ENST00000373993 ARHGEF10O15013 1369 aa18.18■□□□□ 0.5
A1CF-202ENST00000373993 PER1O15534 1290 aaPredicted RBP18.18■□□□□ 0.5
A1CF-202ENST00000373993 PTMSP20962 102 aa18.17■□□□□ 0.5
A1CF-202ENST00000373993 CARD11Q9BXL7 1154 aa18.17■□□□□ 0.5
A1CF-202ENST00000373993 BCL9LQ86UU0 1499 aa18.17■□□□□ 0.5
A1CF-202ENST00000373993 CDK12Q9NYV4 1490 aaPredicted RBP18.17■□□□□ 0.5
A1CF-202ENST00000373993 PLIN1O60240 522 aa18.17■□□□□ 0.5
A1CF-202ENST00000373993 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
A1CF-202ENST00000373993 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
A1CF-202ENST00000373993 ATRNO75882 1429 aa18.15■□□□□ 0.5
A1CF-202ENST00000373993 ESPNB1AK53 854 aa18.15■□□□□ 0.5
A1CF-202ENST00000373993 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
A1CF-202ENST00000373993 TOPAZ1Q8N9V7 1692 aa18.15■□□□□ 0.5
A1CF-202ENST00000373993 MCM4P33991 863 aa18.15■□□□□ 0.5
A1CF-202ENST00000373993 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
A1CF-202ENST00000373993 PLCH1Q4KWH8 1693 aa18.14■□□□□ 0.49
A1CF-202ENST00000373993 MYH16Q9H6N6 1097 aa18.14■□□□□ 0.49
A1CF-202ENST00000373993 CABP2Q9NPB3 220 aa18.14■□□□□ 0.49
A1CF-202ENST00000373993 DUSP27Q5VZP5 1158 aa18.13■□□□□ 0.49
A1CF-202ENST00000373993 CGNL1Q0VF96 1302 aa18.13■□□□□ 0.49
A1CF-202ENST00000373993 TRMT2AQ8IZ69 625 aaKnown RBP18.13■□□□□ 0.49
A1CF-202ENST00000373993 UPF1Q92900 1129 aaKnown RBP eCLIP18.13■□□□□ 0.49
A1CF-202ENST00000373993 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.12■□□□□ 0.49
A1CF-202ENST00000373993 NUTM2GQ5VZR2 741 aa18.12■□□□□ 0.49
A1CF-202ENST00000373993 UNC5CLQ8IV45 518 aa18.12■□□□□ 0.49
A1CF-202ENST00000373993 ACEP12821 1306 aa18.12■□□□□ 0.49
A1CF-202ENST00000373993 SLIT2O94813 1529 aa18.12■□□□□ 0.49
A1CF-202ENST00000373993 PDE3AQ14432 1141 aa18.11■□□□□ 0.49
A1CF-202ENST00000373993 PODXL2Q9NZ53 605 aa18.11■□□□□ 0.49
A1CF-202ENST00000373993 CCDC61Q9Y6R9 512 aa18.11■□□□□ 0.49
A1CF-202ENST00000373993 DDX11L8A8MPP1 907 aa18.11■□□□□ 0.49
A1CF-202ENST00000373993 EP400Q96L91 3159 aa18.11■□□□□ 0.49
A1CF-202ENST00000373993 POLR3GLQ9BT43 218 aa18.11■□□□□ 0.49
A1CF-202ENST00000373993 CHMP5Q9NZZ3 219 aa18.11■□□□□ 0.49
A1CF-202ENST00000373993 PPIP5K1Q6PFW1 1433 aa18.1■□□□□ 0.49
A1CF-202ENST00000373993 MTERF4Q7Z6M4 381 aaKnown RBP18.1■□□□□ 0.49
A1CF-202ENST00000373993 GJD4Q96KN9 370 aaPredicted RBP18.1■□□□□ 0.49
A1CF-202ENST00000373993 CCDC9Q9Y3X0 531 aaKnown RBP18.1■□□□□ 0.49
A1CF-202ENST00000373993 ST20-MTHFSA0A0A6YYL1 179 aa18.1■□□□□ 0.49
A1CF-202ENST00000373993 GOLGA2Q08379 1002 aa18.1■□□□□ 0.49
A1CF-202ENST00000373993 C20orf194Q5TEA3 1177 aa18.09■□□□□ 0.49
A1CF-202ENST00000373993 TBC1D32Q96NH3 1257 aa18.09■□□□□ 0.49
A1CF-202ENST00000373993 CRYBG1Q9Y4K1 1723 aa18.08■□□□□ 0.49
A1CF-202ENST00000373993 FAM83GA6ND36 823 aa18.08■□□□□ 0.49
A1CF-202ENST00000373993 GLI3P10071 1580 aa18.08■□□□□ 0.48
A1CF-202ENST00000373993 NWD2Q9ULI1 1742 aa18.07■□□□□ 0.48
A1CF-202ENST00000373993 POLR3AO14802 1390 aaPredicted RBP18.07■□□□□ 0.48
A1CF-202ENST00000373993 GRPEL1Q9HAV7 217 aa18.07■□□□□ 0.48
A1CF-202ENST00000373993 SKOR2Q2VWA4 1001 aaPredicted RBP18.06■□□□□ 0.48
A1CF-202ENST00000373993 SLFN5Q08AF3 891 aa18.06■□□□□ 0.48
A1CF-202ENST00000373993 BTG4Q9NY30 223 aa18.06■□□□□ 0.48
A1CF-202ENST00000373993 PHRF1Q9P1Y6 1649 aaKnown RBP18.05■□□□□ 0.48
A1CF-202ENST00000373993 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
A1CF-202ENST00000373993 PLEKHG3A1L390 1219 aa18.05■□□□□ 0.48
A1CF-202ENST00000373993 TRAK2O60296 914 aa18.05■□□□□ 0.48
A1CF-202ENST00000373993 CABP1Q9NZU7 370 aa18.05■□□□□ 0.48
A1CF-202ENST00000373993 SKAP1Q86WV1 359 aa18.04■□□□□ 0.48
A1CF-202ENST00000373993 ABTB2Q8N961 1025 aa18.04■□□□□ 0.48
A1CF-202ENST00000373993 TRIM44Q96DX7 344 aaPredicted RBP18.04■□□□□ 0.48
A1CF-202ENST00000373993 PRDM11Q9NQV5 511 aa18.04■□□□□ 0.48
A1CF-202ENST00000373993 COL14A1Q05707 1796 aaKnown RBP18.04■□□□□ 0.48
A1CF-202ENST00000373993 RGS3P49796 1198 aa18.04■□□□□ 0.48
A1CF-202ENST00000373993 NRAPQ86VF7 1730 aa18.03■□□□□ 0.48
A1CF-202ENST00000373993 A0A0G2JS52 829 aa18.03■□□□□ 0.48
A1CF-202ENST00000373993 ATAD2Q6PL18 1390 aa18.03■□□□□ 0.48
A1CF-202ENST00000373993 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.48
A1CF-202ENST00000373993 CHRNA2Q15822 529 aa18.02■□□□□ 0.48
A1CF-202ENST00000373993 HS1BP3Q53T59 392 aa18.02■□□□□ 0.48
A1CF-202ENST00000373993 BRWD3Q6RI45 1802 aa18.02■□□□□ 0.47
A1CF-202ENST00000373993 VPS72Q15906 364 aa18.02■□□□□ 0.47
A1CF-202ENST00000373993 TBC1D2Q9BYX2 928 aa18.02■□□□□ 0.47
A1CF-202ENST00000373993 CIZ1Q9ULV3 898 aaPredicted RBP18.02■□□□□ 0.47
A1CF-202ENST00000373993 KIAA0232Q92628 1395 aa18.01■□□□□ 0.47
A1CF-202ENST00000373993 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
A1CF-202ENST00000373993 PDZRN4Q6ZMN7 1036 aaPredicted RBP18■□□□□ 0.47
A1CF-202ENST00000373993 OFD1O75665 1012 aa18■□□□□ 0.47
A1CF-202ENST00000373993 CCDC173Q0VFZ6 552 aa17.99■□□□□ 0.47
A1CF-202ENST00000373993 PPP1R9BQ96SB3 815 aa17.99■□□□□ 0.47
A1CF-202ENST00000373993 IBTKQ9P2D0 1353 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms