RNA–Protein interactions for RNA: ENST00000373608.7

COPS7B-203, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-203ENST00000373608 SMC4Q9NTJ3 1288 aa17.51■□□□□ 0.39
COPS7B-203ENST00000373608 POLKQ9UBT6 870 aa17.51■□□□□ 0.39
COPS7B-203ENST00000373608 ITSN1Q15811 1721 aa17.5■□□□□ 0.39
COPS7B-203ENST00000373608 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
COPS7B-203ENST00000373608 TNNQ9UQP3 1299 aa17.5■□□□□ 0.39
COPS7B-203ENST00000373608 PCDHB15Q9Y5E8 787 aa17.5■□□□□ 0.39
COPS7B-203ENST00000373608 UBR1Q8IWV7 1749 aa17.5■□□□□ 0.39
COPS7B-203ENST00000373608 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
COPS7B-203ENST00000373608 TNRQ92752 1358 aa17.49■□□□□ 0.39
COPS7B-203ENST00000373608 CDK12Q9NYV4 1490 aaPredicted RBP17.49■□□□□ 0.39
COPS7B-203ENST00000373608 AATKQ6ZMQ8 1374 aa17.48■□□□□ 0.39
COPS7B-203ENST00000373608 IGSF3O75054 1194 aa17.48■□□□□ 0.39
COPS7B-203ENST00000373608 HMGB1P09429 215 aaKnown RBP17.47■□□□□ 0.39
COPS7B-203ENST00000373608 PRKAR2BP31323 418 aa17.46■□□□□ 0.39
COPS7B-203ENST00000373608 TXNDC2Q86VQ3 553 aa17.46■□□□□ 0.39
COPS7B-203ENST00000373608 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
COPS7B-203ENST00000373608 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
COPS7B-203ENST00000373608 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
COPS7B-203ENST00000373608 KIF16BQ96L93 1317 aa17.46■□□□□ 0.39
COPS7B-203ENST00000373608 C3P01024 1663 aa17.46■□□□□ 0.39
COPS7B-203ENST00000373608 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.39
COPS7B-203ENST00000373608 NUDT16Q96DE0 195 aaKnown RBP17.46■□□□□ 0.39
COPS7B-203ENST00000373608 CALD1Q05682 793 aaKnown RBP17.45■□□□□ 0.38
COPS7B-203ENST00000373608 ZNF428Q96B54 188 aa17.45■□□□□ 0.38
COPS7B-203ENST00000373608 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
COPS7B-203ENST00000373608 LAS1LQ9Y4W2 734 aaKnown RBP17.45■□□□□ 0.38
COPS7B-203ENST00000373608 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
COPS7B-203ENST00000373608 TRIM27P14373 513 aa17.45■□□□□ 0.38
COPS7B-203ENST00000373608 ALDH1L2Q3SY69 923 aa17.45■□□□□ 0.38
COPS7B-203ENST00000373608 IPO8O15397 1037 aaKnown RBP17.44■□□□□ 0.38
COPS7B-203ENST00000373608 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
COPS7B-203ENST00000373608 COG3Q96JB2 828 aa17.43■□□□□ 0.38
COPS7B-203ENST00000373608 NFE2L2Q16236 605 aa17.43■□□□□ 0.38
COPS7B-203ENST00000373608 NME9Q86XW9 330 aa17.43■□□□□ 0.38
COPS7B-203ENST00000373608 PDZRN3Q9UPQ7 1066 aa17.43■□□□□ 0.38
COPS7B-203ENST00000373608 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
COPS7B-203ENST00000373608 IL13P35225 146 aa17.41■□□□□ 0.38
COPS7B-203ENST00000373608 EMILIN1Q9Y6C2 1016 aa17.41■□□□□ 0.38
COPS7B-203ENST00000373608 FBLN1P23142 703 aa17.41■□□□□ 0.38
COPS7B-203ENST00000373608 ITPRIPQ8IWB1 547 aa17.41■□□□□ 0.38
COPS7B-203ENST00000373608 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
COPS7B-203ENST00000373608 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
COPS7B-203ENST00000373608 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
COPS7B-203ENST00000373608 TOPAZ1Q8N9V7 1692 aa17.4■□□□□ 0.38
COPS7B-203ENST00000373608 HMOX1P09601 288 aa17.39■□□□□ 0.38
COPS7B-203ENST00000373608 LMOD3Q0VAK6 560 aa17.39■□□□□ 0.37
COPS7B-203ENST00000373608 ADAMTS13Q76LX8 1427 aa17.39■□□□□ 0.37
COPS7B-203ENST00000373608 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
COPS7B-203ENST00000373608 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
COPS7B-203ENST00000373608 GNAI1P63096 354 aa17.38■□□□□ 0.37
COPS7B-203ENST00000373608 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
COPS7B-203ENST00000373608 PHACTR3Q96KR7 559 aa17.38■□□□□ 0.37
COPS7B-203ENST00000373608 UPF2Q9HAU5 1272 aaKnown RBP17.38■□□□□ 0.37
COPS7B-203ENST00000373608 IFT57Q9NWB7 429 aa17.38■□□□□ 0.37
COPS7B-203ENST00000373608 USP19O94966 1318 aa17.38■□□□□ 0.37
COPS7B-203ENST00000373608 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
COPS7B-203ENST00000373608 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.37■□□□□ 0.37
COPS7B-203ENST00000373608 ROBO2Q9HCK4 1378 aa17.37■□□□□ 0.37
COPS7B-203ENST00000373608 CCDC9Q9Y3X0 531 aaKnown RBP17.36■□□□□ 0.37
COPS7B-203ENST00000373608 SLC4A3P48751 1232 aa17.36■□□□□ 0.37
COPS7B-203ENST00000373608 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
COPS7B-203ENST00000373608 PRR36Q9H6K5 1346 aa17.36■□□□□ 0.37
COPS7B-203ENST00000373608 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
COPS7B-203ENST00000373608 ZBTB40Q9NUA8 1239 aa17.35■□□□□ 0.37
COPS7B-203ENST00000373608 NCKAP5LQ9HCH0 1330 aa17.35■□□□□ 0.37
COPS7B-203ENST00000373608 ARHGAP45Q92619 1136 aa17.34■□□□□ 0.37
COPS7B-203ENST00000373608 SEC24BO95487 1268 aa17.34■□□□□ 0.37
COPS7B-203ENST00000373608 RRS1Q15050 365 aaKnown RBP17.34■□□□□ 0.37
COPS7B-203ENST00000373608 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.37
COPS7B-203ENST00000373608 ZNF853P0CG23 659 aa17.33■□□□□ 0.36
COPS7B-203ENST00000373608 BECN1Q14457 450 aa17.33■□□□□ 0.36
COPS7B-203ENST00000373608 SMC5Q8IY18 1101 aa17.33■□□□□ 0.36
COPS7B-203ENST00000373608 VAMP4O75379 141 aa17.33■□□□□ 0.36
COPS7B-203ENST00000373608 PTCH1Q13635 1447 aa17.32■□□□□ 0.36
COPS7B-203ENST00000373608 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
COPS7B-203ENST00000373608 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
COPS7B-203ENST00000373608 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
COPS7B-203ENST00000373608 TTC21BQ7Z4L5 1316 aa17.31■□□□□ 0.36
COPS7B-203ENST00000373608 IPO4Q8TEX9 1081 aaKnown RBP17.31■□□□□ 0.36
COPS7B-203ENST00000373608 OVOS2A0A0J9YW53 1432 aa17.31■□□□□ 0.36
COPS7B-203ENST00000373608 OVOS2Q6IE36 1432 aa17.31■□□□□ 0.36
COPS7B-203ENST00000373608 THUMPD2Q9BTF0 503 aaKnown RBP17.31■□□□□ 0.36
COPS7B-203ENST00000373608 MBIPQ9NS73 344 aa17.31■□□□□ 0.36
COPS7B-203ENST00000373608 PIK3R4Q99570 1358 aa17.3■□□□□ 0.36
COPS7B-203ENST00000373608 NFKBIBQ15653 356 aa17.3■□□□□ 0.36
COPS7B-203ENST00000373608 MRPL50Q8N5N7 158 aaKnown RBP17.3■□□□□ 0.36
COPS7B-203ENST00000373608 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
COPS7B-203ENST00000373608 ACEP12821 1306 aa17.3■□□□□ 0.36
COPS7B-203ENST00000373608 USP6P35125 1406 aa17.3■□□□□ 0.36
COPS7B-203ENST00000373608 SLIT1O75093 1534 aa17.3■□□□□ 0.36
COPS7B-203ENST00000373608 LTKP29376 864 aa17.3■□□□□ 0.36
COPS7B-203ENST00000373608 TBC1D32Q96NH3 1257 aa17.29■□□□□ 0.36
COPS7B-203ENST00000373608 ZFP91Q96JP5 570 aaPredicted RBP17.29■□□□□ 0.36
COPS7B-203ENST00000373608 TWISTNBQ3B726 338 aaPredicted RBP17.28■□□□□ 0.36
COPS7B-203ENST00000373608 TEX2Q8IWB9 1127 aa17.28■□□□□ 0.36
COPS7B-203ENST00000373608 ARHGAP23Q9P227 1491 aa17.27■□□□□ 0.36
COPS7B-203ENST00000373608 DIP2AQ14689 1571 aa17.27■□□□□ 0.35
COPS7B-203ENST00000373608 TSPYL6Q8N831 410 aa17.27■□□□□ 0.35
COPS7B-203ENST00000373608 RGPD1P0DJD0 1748 aa17.26■□□□□ 0.35
COPS7B-203ENST00000373608 EIF4A2Q14240 407 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms