RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 PHACTR3Q96KR7 559 aa22.52■■□□□ 1.2
HNF4A-203ENST00000372920 ESPNB1AK53 854 aa22.51■■□□□ 1.19
HNF4A-203ENST00000372920 CDK19Q9BWU1 502 aa22.51■■□□□ 1.19
HNF4A-203ENST00000372920 ERBB4Q15303 1308 aa22.5■■□□□ 1.19
HNF4A-203ENST00000372920 NFE2L2Q16236 605 aa22.5■■□□□ 1.19
HNF4A-203ENST00000372920 YTHDC2Q9H6S0 1430 aaKnown RBP22.5■■□□□ 1.19
HNF4A-203ENST00000372920 POLKQ9UBT6 870 aa22.5■■□□□ 1.19
HNF4A-203ENST00000372920 CLTCQ00610 1675 aaKnown RBP22.5■■□□□ 1.19
HNF4A-203ENST00000372920 PTMSP20962 102 aa22.49■■□□□ 1.19
HNF4A-203ENST00000372920 SLC52A1Q9NWF4 448 aa22.49■■□□□ 1.19
HNF4A-203ENST00000372920 HMOX1P09601 288 aa22.49■■□□□ 1.19
HNF4A-203ENST00000372920 ARHGAP31Q2M1Z3 1444 aa22.49■■□□□ 1.19
HNF4A-203ENST00000372920 ELL2O00472 640 aaPredicted RBP22.49■■□□□ 1.19
HNF4A-203ENST00000372920 RAPGEF3O95398 923 aa22.49■■□□□ 1.19
HNF4A-203ENST00000372920 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.48■■□□□ 1.19
HNF4A-203ENST00000372920 ABCC4O15439 1325 aa22.48■■□□□ 1.19
HNF4A-203ENST00000372920 NPM1P06748 294 aaKnown RBP eCLIP22.48■■□□□ 1.19
HNF4A-203ENST00000372920 GAS2L2Q8NHY3 880 aa22.48■■□□□ 1.19
HNF4A-203ENST00000372920 SSFA2P28290 1259 aa22.47■■□□□ 1.19
HNF4A-203ENST00000372920 CALD1Q05682 793 aaKnown RBP22.47■■□□□ 1.19
HNF4A-203ENST00000372920 CDC45O75419 566 aa22.46■■□□□ 1.19
HNF4A-203ENST00000372920 GNAI1P63096 354 aa22.46■■□□□ 1.19
HNF4A-203ENST00000372920 TRIM44Q96DX7 344 aaPredicted RBP22.46■■□□□ 1.19
HNF4A-203ENST00000372920 MBIPQ9NS73 344 aa22.46■■□□□ 1.19
HNF4A-203ENST00000372920 IFT57Q9NWB7 429 aa22.46■■□□□ 1.19
HNF4A-203ENST00000372920 ARHGEF40Q8TER5 1519 aa22.45■■□□□ 1.18
HNF4A-203ENST00000372920 KIF20BQ96Q89 1820 aa22.44■■□□□ 1.18
HNF4A-203ENST00000372920 ZNF853P0CG23 659 aa22.44■■□□□ 1.18
HNF4A-203ENST00000372920 GSPT1P15170 499 aaKnown RBP22.44■■□□□ 1.18
HNF4A-203ENST00000372920 TWISTNBQ3B726 338 aaPredicted RBP22.42■■□□□ 1.18
HNF4A-203ENST00000372920 CLEC17AQ6ZS10 378 aa22.42■■□□□ 1.18
HNF4A-203ENST00000372920 MYO5BQ9ULV0 1848 aa22.41■■□□□ 1.18
HNF4A-203ENST00000372920 GOLGA6L22H0YM25 854 aa22.41■■□□□ 1.18
HNF4A-203ENST00000372920 C8orf58Q8NAV2 365 aa22.41■■□□□ 1.18
HNF4A-203ENST00000372920 TMEM131LA2VDJ0 1609 aa22.41■■□□□ 1.18
HNF4A-203ENST00000372920 REREQ9P2R6 1566 aa22.41■■□□□ 1.18
HNF4A-203ENST00000372920 DIP2CQ9Y2E4 1556 aa22.41■■□□□ 1.18
HNF4A-203ENST00000372920 PLEKHM2Q8IWE5 1019 aa22.41■■□□□ 1.18
HNF4A-203ENST00000372920 EMILIN1Q9Y6C2 1016 aa22.4■■□□□ 1.18
HNF4A-203ENST00000372920 API5Q9BZZ5 524 aaKnown RBP22.4■■□□□ 1.18
HNF4A-203ENST00000372920 BAG4O95429 457 aaKnown RBP22.39■■□□□ 1.18
HNF4A-203ENST00000372920 IL13P35225 146 aa22.39■■□□□ 1.17
HNF4A-203ENST00000372920 KLHL40Q2TBA0 621 aa22.38■■□□□ 1.17
HNF4A-203ENST00000372920 CFAP44Q96MT7 982 aa22.38■■□□□ 1.17
HNF4A-203ENST00000372920 DDX49Q9Y6V7 483 aaKnown RBP22.38■■□□□ 1.17
HNF4A-203ENST00000372920 RABEP1Q15276 862 aa22.37■■□□□ 1.17
HNF4A-203ENST00000372920 DCTPP1Q9H773 170 aa22.37■■□□□ 1.17
HNF4A-203ENST00000372920 ALKQ9UM73 1620 aa22.37■■□□□ 1.17
HNF4A-203ENST00000372920 NASPP49321 788 aaPredicted RBP22.36■■□□□ 1.17
HNF4A-203ENST00000372920 TTC22Q5TAA0 569 aa22.36■■□□□ 1.17
HNF4A-203ENST00000372920 CCDC173Q0VFZ6 552 aa22.36■■□□□ 1.17
HNF4A-203ENST00000372920 C16orf71Q8IYS4 520 aaPredicted RBP22.35■■□□□ 1.17
HNF4A-203ENST00000372920 ATP7BP35670 1465 aa22.35■■□□□ 1.17
HNF4A-203ENST00000372920 WAPLQ7Z5K2 1190 aa22.34■■□□□ 1.17
HNF4A-203ENST00000372920 IBTKQ9P2D0 1353 aaPredicted RBP22.34■■□□□ 1.17
HNF4A-203ENST00000372920 FAM83GA6ND36 823 aa22.34■■□□□ 1.17
HNF4A-203ENST00000372920 PPP1R9BQ96SB3 815 aa22.34■■□□□ 1.17
HNF4A-203ENST00000372920 LMOD3Q0VAK6 560 aa22.34■■□□□ 1.17
HNF4A-203ENST00000372920 KNDC1Q76NI1 1749 aa22.33■■□□□ 1.17
HNF4A-203ENST00000372920 KIF24Q5T7B8 1368 aa22.33■■□□□ 1.17
HNF4A-203ENST00000372920 USP26Q9BXU7 913 aa22.33■■□□□ 1.17
HNF4A-203ENST00000372920 NEO1Q92859 1461 aa22.33■■□□□ 1.17
HNF4A-203ENST00000372920 PREX1Q8TCU6 1659 aa22.33■■□□□ 1.17
HNF4A-203ENST00000372920 YEATS2Q9ULM3 1422 aa22.33■■□□□ 1.16
HNF4A-203ENST00000372920 MAP2P11137 1827 aaKnown RBP22.32■■□□□ 1.16
HNF4A-203ENST00000372920 FBXO31Q5XUX0 539 aaPredicted RBP22.32■■□□□ 1.16
HNF4A-203ENST00000372920 RIMS2Q9UQ26 1411 aa22.32■■□□□ 1.16
HNF4A-203ENST00000372920 NME9Q86XW9 330 aa22.32■■□□□ 1.16
HNF4A-203ENST00000372920 DCTN1Q14203 1278 aa22.31■■□□□ 1.16
HNF4A-203ENST00000372920 HSP90AA2PQ14568 343 aaPredicted RBP22.31■■□□□ 1.16
HNF4A-203ENST00000372920 MCTP1Q6DN14 999 aa22.31■■□□□ 1.16
HNF4A-203ENST00000372920 ZRANB1Q9UGI0 708 aa22.31■■□□□ 1.16
HNF4A-203ENST00000372920 NUCB2P80303 420 aa22.31■■□□□ 1.16
HNF4A-203ENST00000372920 CDK12Q9NYV4 1490 aaPredicted RBP22.31■■□□□ 1.16
HNF4A-203ENST00000372920 OTUD7AQ8TE49 926 aaPredicted RBP22.31■■□□□ 1.16
HNF4A-203ENST00000372920 INTS3Q68E01 1043 aaKnown RBP22.3■■□□□ 1.16
HNF4A-203ENST00000372920 RRP9O43818 475 aaKnown RBP22.3■■□□□ 1.16
HNF4A-203ENST00000372920 CYP2E1P05181 493 aaPredicted RBP22.3■■□□□ 1.16
HNF4A-203ENST00000372920 ANKRD44Q8N8A2 993 aa22.29■■□□□ 1.16
HNF4A-203ENST00000372920 PKP1Q13835 747 aa22.29■■□□□ 1.16
HNF4A-203ENST00000372920 ANP32BQ92688 251 aaKnown RBP22.29■■□□□ 1.16
HNF4A-203ENST00000372920 ATP10DQ9P241 1426 aa22.28■■□□□ 1.16
HNF4A-203ENST00000372920 ZNF445P59923 1031 aa22.28■■□□□ 1.16
HNF4A-203ENST00000372920 LMBRD1Q9NUN5 540 aa22.28■■□□□ 1.16
HNF4A-203ENST00000372920 STAG3Q9UJ98 1225 aa22.28■■□□□ 1.16
HNF4A-203ENST00000372920 EDC4Q6P2E9 1401 aaKnown RBP22.27■■□□□ 1.16
HNF4A-203ENST00000372920 SDSP20132 328 aa22.27■■□□□ 1.16
HNF4A-203ENST00000372920 RRS1Q15050 365 aaKnown RBP22.27■■□□□ 1.16
HNF4A-203ENST00000372920 CAVIN1Q6NZI2 390 aaKnown RBP22.27■■□□□ 1.16
HNF4A-203ENST00000372920 NCLP19338 710 aaKnown RBP22.26■■□□□ 1.15
HNF4A-203ENST00000372920 ZSCAN30Q86W11 494 aa22.26■■□□□ 1.15
HNF4A-203ENST00000372920 CPSF1Q10570 1443 aaKnown RBP22.26■■□□□ 1.15
HNF4A-203ENST00000372920 AATKQ6ZMQ8 1374 aa22.26■■□□□ 1.15
HNF4A-203ENST00000372920 CEP85Q6P2H3 762 aa22.26■■□□□ 1.15
HNF4A-203ENST00000372920 ZSCAN23Q3MJ62 389 aa22.26■■□□□ 1.15
HNF4A-203ENST00000372920 RPAP2Q8IXW5 612 aaPredicted RBP22.25■■□□□ 1.15
HNF4A-203ENST00000372920 AK9Q5TCS8 1911 aa22.25■■□□□ 1.15
HNF4A-203ENST00000372920 SMARCA5O60264 1052 aaPredicted RBP22.25■■□□□ 1.15
HNF4A-203ENST00000372920 GLIPR1L2Q4G1C9 344 aa22.25■■□□□ 1.15
HNF4A-203ENST00000372920 DLG5Q8TDM6 1919 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms