RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
TSC22D3-206ENST00000372397 MVPQ14764 893 aaKnown RBP16.31■□□□□ 0.2
TSC22D3-206ENST00000372397 FTSJ3Q8IY81 847 aaKnown RBP16.31■□□□□ 0.2
TSC22D3-206ENST00000372397 DLG5Q8TDM6 1919 aa16.3■□□□□ 0.2
TSC22D3-206ENST00000372397 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
TSC22D3-206ENST00000372397 SSH2Q76I76 1423 aa16.3■□□□□ 0.2
TSC22D3-206ENST00000372397 CEP170BQ9Y4F5 1589 aaPredicted RBP16.3■□□□□ 0.2
TSC22D3-206ENST00000372397 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
TSC22D3-206ENST00000372397 NOB1Q9ULX3 412 aaKnown RBP16.29■□□□□ 0.2
TSC22D3-206ENST00000372397 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
TSC22D3-206ENST00000372397 RIMS1Q86UR5 1692 aaKnown RBP16.29■□□□□ 0.2
TSC22D3-206ENST00000372397 TRIM27P14373 513 aa16.29■□□□□ 0.2
TSC22D3-206ENST00000372397 KCNA6P17658 529 aa16.29■□□□□ 0.2
TSC22D3-206ENST00000372397 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
TSC22D3-206ENST00000372397 NGDNQ8NEJ9 315 aaKnown RBP16.29■□□□□ 0.2
TSC22D3-206ENST00000372397 NALCNQ8IZF0 1738 aa16.28■□□□□ 0.2
TSC22D3-206ENST00000372397 FAM161AQ3B820 660 aa16.28■□□□□ 0.2
TSC22D3-206ENST00000372397 ATF7IPQ6VMQ6 1270 aa16.28■□□□□ 0.2
TSC22D3-206ENST00000372397 ZBTB47Q9UFB7 747 aaPredicted RBP16.28■□□□□ 0.2
TSC22D3-206ENST00000372397 SOX12O15370 315 aa16.28■□□□□ 0.2
TSC22D3-206ENST00000372397 USP31Q70CQ4 1352 aa16.27■□□□□ 0.2
TSC22D3-206ENST00000372397 GNAI1P63096 354 aa16.27■□□□□ 0.2
TSC22D3-206ENST00000372397 TTC21AQ8NDW8 1320 aa16.27■□□□□ 0.19
TSC22D3-206ENST00000372397 PEAK1Q9H792 1746 aa16.27■□□□□ 0.19
TSC22D3-206ENST00000372397 ALDH1L2Q3SY69 923 aa16.26■□□□□ 0.19
TSC22D3-206ENST00000372397 C8orf34Q49A92 452 aa16.26■□□□□ 0.19
TSC22D3-206ENST00000372397 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
TSC22D3-206ENST00000372397 SULT6B1Q6IMI4 303 aa16.26■□□□□ 0.19
TSC22D3-206ENST00000372397 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
TSC22D3-206ENST00000372397 IFT57Q9NWB7 429 aa16.26■□□□□ 0.19
TSC22D3-206ENST00000372397 LMOD3Q0VAK6 560 aa16.26■□□□□ 0.19
TSC22D3-206ENST00000372397 IPO8O15397 1037 aaKnown RBP16.25■□□□□ 0.19
TSC22D3-206ENST00000372397 ZNF853P0CG23 659 aa16.25■□□□□ 0.19
TSC22D3-206ENST00000372397 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
TSC22D3-206ENST00000372397 FAM83GA6ND36 823 aa16.24■□□□□ 0.19
TSC22D3-206ENST00000372397 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
TSC22D3-206ENST00000372397 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
TSC22D3-206ENST00000372397 KIF16BQ96L93 1317 aa16.24■□□□□ 0.19
TSC22D3-206ENST00000372397 PIK3R4Q99570 1358 aa16.24■□□□□ 0.19
TSC22D3-206ENST00000372397 VAMP4O75379 141 aa16.24■□□□□ 0.19
TSC22D3-206ENST00000372397 ZNF428Q96B54 188 aa16.24■□□□□ 0.19
TSC22D3-206ENST00000372397 DCTN1Q14203 1278 aa16.23■□□□□ 0.19
TSC22D3-206ENST00000372397 ANKLE2Q86XL3 938 aa16.23■□□□□ 0.19
TSC22D3-206ENST00000372397 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
TSC22D3-206ENST00000372397 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
TSC22D3-206ENST00000372397 TMEM57Q8N5G2 664 aa16.23■□□□□ 0.19
TSC22D3-206ENST00000372397 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
TSC22D3-206ENST00000372397 MAP3K19Q56UN5 1328 aa16.23■□□□□ 0.19
TSC22D3-206ENST00000372397 ANKARQ7Z5J8 1434 aa16.22■□□□□ 0.19
TSC22D3-206ENST00000372397 ELL2O00472 640 aaPredicted RBP16.21■□□□□ 0.19
TSC22D3-206ENST00000372397 RGPD1P0DJD0 1748 aa16.21■□□□□ 0.19
TSC22D3-206ENST00000372397 FMN2Q9NZ56 1722 aa16.21■□□□□ 0.19
TSC22D3-206ENST00000372397 PIK3C2AO00443 1686 aa16.21■□□□□ 0.19
TSC22D3-206ENST00000372397 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.18
TSC22D3-206ENST00000372397 PDZRN3Q9UPQ7 1066 aa16.21■□□□□ 0.18
TSC22D3-206ENST00000372397 CHD2O14647 1828 aaKnown RBP16.21■□□□□ 0.18
TSC22D3-206ENST00000372397 MRPL50Q8N5N7 158 aaKnown RBP16.2■□□□□ 0.18
TSC22D3-206ENST00000372397 C8orf58Q8NAV2 365 aa16.19■□□□□ 0.18
TSC22D3-206ENST00000372397 NLRP6P59044 892 aa16.19■□□□□ 0.18
TSC22D3-206ENST00000372397 TWISTNBQ3B726 338 aaPredicted RBP16.19■□□□□ 0.18
TSC22D3-206ENST00000372397 SBNO1A3KN83 1393 aa16.18■□□□□ 0.18
TSC22D3-206ENST00000372397 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
TSC22D3-206ENST00000372397 ADAMTSL3P82987 1691 aa16.18■□□□□ 0.18
TSC22D3-206ENST00000372397 DEKP35659 375 aaKnown RBP16.18■□□□□ 0.18
TSC22D3-206ENST00000372397 AMPHP49418 695 aa16.18■□□□□ 0.18
TSC22D3-206ENST00000372397 NUTM2GQ5VZR2 741 aa16.18■□□□□ 0.18
TSC22D3-206ENST00000372397 ZBTB40Q9NUA8 1239 aa16.18■□□□□ 0.18
TSC22D3-206ENST00000372397 FLT4P35916 1363 aa16.17■□□□□ 0.18
TSC22D3-206ENST00000372397 RBM33Q96EV2 1170 aaKnown RBP16.17■□□□□ 0.18
TSC22D3-206ENST00000372397 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
TSC22D3-206ENST00000372397 SETD1BQ9UPS6 1966 aaKnown RBP16.17■□□□□ 0.18
TSC22D3-206ENST00000372397 HDAC1Q13547 482 aaPredicted RBP16.16■□□□□ 0.18
TSC22D3-206ENST00000372397 MCM10Q7L590 875 aa16.16■□□□□ 0.18
TSC22D3-206ENST00000372397 ARHGAP45Q92619 1136 aa16.16■□□□□ 0.18
TSC22D3-206ENST00000372397 ARHGEF10O15013 1369 aa16.16■□□□□ 0.18
TSC22D3-206ENST00000372397 DDRGK1Q96HY6 314 aa16.16■□□□□ 0.18
TSC22D3-206ENST00000372397 ABTB2Q8N961 1025 aa16.15■□□□□ 0.18
TSC22D3-206ENST00000372397 MARF1Q9Y4F3 1742 aaKnown RBP16.14■□□□□ 0.17
TSC22D3-206ENST00000372397 CHL1O00533 1208 aa16.14■□□□□ 0.17
TSC22D3-206ENST00000372397 EYA1Q99502 592 aa16.14■□□□□ 0.17
TSC22D3-206ENST00000372397 PHF8Q9UPP1 1060 aa16.14■□□□□ 0.17
TSC22D3-206ENST00000372397 FOXO3O43524 673 aa16.12■□□□□ 0.17
TSC22D3-206ENST00000372397 MTHFSDQ2M296 383 aaKnown RBP16.12■□□□□ 0.17
TSC22D3-206ENST00000372397 IGSF1Q8N6C5 1336 aa16.12■□□□□ 0.17
TSC22D3-206ENST00000372397 KDRP35968 1356 aa16.11■□□□□ 0.17
TSC22D3-206ENST00000372397 ZBTB7BO15156 539 aaPredicted RBP16.11■□□□□ 0.17
TSC22D3-206ENST00000372397 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
TSC22D3-206ENST00000372397 SEC24BO95487 1268 aa16.11■□□□□ 0.17
TSC22D3-206ENST00000372397 HOXC9P31274 260 aa16.11■□□□□ 0.17
TSC22D3-206ENST00000372397 KRT24Q2M2I5 525 aa16.11■□□□□ 0.17
TSC22D3-206ENST00000372397 USP54Q70EL1 1684 aa16.1■□□□□ 0.17
TSC22D3-206ENST00000372397 CRB1P82279 1406 aa16.1■□□□□ 0.17
TSC22D3-206ENST00000372397 SMC5Q8IY18 1101 aa16.1■□□□□ 0.17
TSC22D3-206ENST00000372397 ABCC4O15439 1325 aa16.1■□□□□ 0.17
TSC22D3-206ENST00000372397 NBR1Q14596 966 aa16.09■□□□□ 0.17
TSC22D3-206ENST00000372397 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
TSC22D3-206ENST00000372397 API5Q9BZZ5 524 aaKnown RBP16.09■□□□□ 0.17
TSC22D3-206ENST00000372397 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
TSC22D3-206ENST00000372397 KIF24Q5T7B8 1368 aa16.08■□□□□ 0.17
TSC22D3-206ENST00000372397 NPHP4O75161 1426 aaPredicted RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms