RNA–Protein interactions for RNA: ENST00000372247.6

RNF220-204, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF220, Length 3,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-204ENST00000372247 SIRT1Q96EB6 747 aa17.37■□□□□ 0.37
RNF220-204ENST00000372247 CHD1LQ86WJ1 897 aa17.37■□□□□ 0.37
RNF220-204ENST00000372247 VAMP4O75379 141 aa17.37■□□□□ 0.37
RNF220-204ENST00000372247 MINK1Q8N4C8 1332 aaPredicted RBP17.35■□□□□ 0.37
RNF220-204ENST00000372247 NUTM2DQ5VT03 806 aaPredicted RBP17.35■□□□□ 0.37
RNF220-204ENST00000372247 NALCNQ8IZF0 1738 aa17.35■□□□□ 0.37
RNF220-204ENST00000372247 IL13P35225 146 aa17.34■□□□□ 0.37
RNF220-204ENST00000372247 RGPD1P0DJD0 1748 aa17.34■□□□□ 0.37
RNF220-204ENST00000372247 ITSN1Q15811 1721 aa17.34■□□□□ 0.37
RNF220-204ENST00000372247 TOPAZ1Q8N9V7 1692 aa17.34■□□□□ 0.37
RNF220-204ENST00000372247 KIF2CQ99661 725 aa17.34■□□□□ 0.37
RNF220-204ENST00000372247 CLEC17AQ6ZS10 378 aa17.34■□□□□ 0.37
RNF220-204ENST00000372247 ANO8Q9HCE9 1232 aaPredicted RBP17.34■□□□□ 0.37
RNF220-204ENST00000372247 RTN4Q9NQC3 1192 aaKnown RBP17.34■□□□□ 0.37
RNF220-204ENST00000372247 DDX11L8A8MPP1 907 aa17.33■□□□□ 0.37
RNF220-204ENST00000372247 GNAI1P63096 354 aa17.33■□□□□ 0.37
RNF220-204ENST00000372247 CABP1Q9NZU7 370 aa17.33■□□□□ 0.37
RNF220-204ENST00000372247 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.36
RNF220-204ENST00000372247 MFAP1P55081 439 aaKnown RBP17.33■□□□□ 0.36
RNF220-204ENST00000372247 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
RNF220-204ENST00000372247 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
RNF220-204ENST00000372247 HSCBQ8IWL3 235 aa17.32■□□□□ 0.36
RNF220-204ENST00000372247 STK26Q9P289 416 aa17.32■□□□□ 0.36
RNF220-204ENST00000372247 DIP2BQ9P265 1576 aa17.31■□□□□ 0.36
RNF220-204ENST00000372247 PTMSP20962 102 aa17.3■□□□□ 0.36
RNF220-204ENST00000372247 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
RNF220-204ENST00000372247 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
RNF220-204ENST00000372247 CFAP44Q96MT7 982 aa17.29■□□□□ 0.36
RNF220-204ENST00000372247 XRCC6P12956 609 aaKnown RBP eCLIP17.29■□□□□ 0.36
RNF220-204ENST00000372247 SIRT2Q8IXJ6 389 aa17.29■□□□□ 0.36
RNF220-204ENST00000372247 RAB3GAP1Q15042 981 aa17.29■□□□□ 0.36
RNF220-204ENST00000372247 RGS12O14924 1447 aa17.28■□□□□ 0.36
RNF220-204ENST00000372247 GOLGA6L3A6NEY3 463 aa17.28■□□□□ 0.36
RNF220-204ENST00000372247 PHACTR3Q96KR7 559 aa17.28■□□□□ 0.36
RNF220-204ENST00000372247 TRAK2O60296 914 aa17.28■□□□□ 0.36
RNF220-204ENST00000372247 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
RNF220-204ENST00000372247 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
RNF220-204ENST00000372247 ATP10DQ9P241 1426 aa17.26■□□□□ 0.35
RNF220-204ENST00000372247 MRE11P49959 708 aa17.26■□□□□ 0.35
RNF220-204ENST00000372247 KIAA0232Q92628 1395 aa17.26■□□□□ 0.35
RNF220-204ENST00000372247 WASLO00401 505 aaPredicted RBP17.25■□□□□ 0.35
RNF220-204ENST00000372247 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
RNF220-204ENST00000372247 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
RNF220-204ENST00000372247 FBXO31Q5XUX0 539 aaPredicted RBP17.25■□□□□ 0.35
RNF220-204ENST00000372247 INTS3Q68E01 1043 aaKnown RBP17.25■□□□□ 0.35
RNF220-204ENST00000372247 N4BP2Q86UW6 1770 aaPredicted RBP17.24■□□□□ 0.35
RNF220-204ENST00000372247 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
RNF220-204ENST00000372247 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
RNF220-204ENST00000372247 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
RNF220-204ENST00000372247 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
RNF220-204ENST00000372247 TUBGCP6Q96RT7 1819 aa17.23■□□□□ 0.35
RNF220-204ENST00000372247 OVOS2A0A0J9YW53 1432 aa17.23■□□□□ 0.35
RNF220-204ENST00000372247 OVOS2Q6IE36 1432 aa17.23■□□□□ 0.35
RNF220-204ENST00000372247 RRAGDQ9NQL2 400 aaPredicted RBP17.23■□□□□ 0.35
RNF220-204ENST00000372247 TWISTNBQ3B726 338 aaPredicted RBP17.21■□□□□ 0.35
RNF220-204ENST00000372247 TNPO1Q92973 898 aaKnown RBP17.21■□□□□ 0.35
RNF220-204ENST00000372247 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.35
RNF220-204ENST00000372247 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
RNF220-204ENST00000372247 PEAK1Q9H792 1746 aa17.21■□□□□ 0.34
RNF220-204ENST00000372247 CDC45O75419 566 aa17.21■□□□□ 0.34
RNF220-204ENST00000372247 HAP1P54257 671 aaPredicted RBP17.21■□□□□ 0.34
RNF220-204ENST00000372247 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.34
RNF220-204ENST00000372247 CLCN1P35523 988 aa17.2■□□□□ 0.34
RNF220-204ENST00000372247 LRRC37A3O60309 1634 aa17.2■□□□□ 0.34
RNF220-204ENST00000372247 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
RNF220-204ENST00000372247 METP08581 1390 aa17.19■□□□□ 0.34
RNF220-204ENST00000372247 USP31Q70CQ4 1352 aa17.19■□□□□ 0.34
RNF220-204ENST00000372247 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
RNF220-204ENST00000372247 UBR1Q8IWV7 1749 aa17.19■□□□□ 0.34
RNF220-204ENST00000372247 USP54Q70EL1 1684 aa17.19■□□□□ 0.34
RNF220-204ENST00000372247 PLEKHM2Q8IWE5 1019 aa17.18■□□□□ 0.34
RNF220-204ENST00000372247 C8orf58Q8NAV2 365 aa17.18■□□□□ 0.34
RNF220-204ENST00000372247 RIMS1Q86UR5 1692 aaKnown RBP17.18■□□□□ 0.34
RNF220-204ENST00000372247 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
RNF220-204ENST00000372247 FMN2Q9NZ56 1722 aa17.18■□□□□ 0.34
RNF220-204ENST00000372247 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
RNF220-204ENST00000372247 ANKRD44Q8N8A2 993 aa17.18■□□□□ 0.34
RNF220-204ENST00000372247 GSPT1P15170 499 aaKnown RBP17.18■□□□□ 0.34
RNF220-204ENST00000372247 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
RNF220-204ENST00000372247 PTPRCP08575 1304 aa17.17■□□□□ 0.34
RNF220-204ENST00000372247 CHL1O00533 1208 aa17.17■□□□□ 0.34
RNF220-204ENST00000372247 NME9Q86XW9 330 aa17.17■□□□□ 0.34
RNF220-204ENST00000372247 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
RNF220-204ENST00000372247 GRPEL1Q9HAV7 217 aa17.17■□□□□ 0.34
RNF220-204ENST00000372247 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.17■□□□□ 0.34
RNF220-204ENST00000372247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.341e-7■□□□□ 10.8
RNF220-204ENST00000372247 CRB1P82279 1406 aa17.16■□□□□ 0.34
RNF220-204ENST00000372247 CD2BP2O95400 341 aaKnown RBP17.16■□□□□ 0.34
RNF220-204ENST00000372247 CYP2E1P05181 493 aaPredicted RBP17.16■□□□□ 0.34
RNF220-204ENST00000372247 HMOX1P09601 288 aa17.16■□□□□ 0.34
RNF220-204ENST00000372247 TTC22Q5TAA0 569 aa17.16■□□□□ 0.34
RNF220-204ENST00000372247 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
RNF220-204ENST00000372247 RABEP1Q15276 862 aa17.15■□□□□ 0.34
RNF220-204ENST00000372247 NUDT16Q96DE0 195 aaKnown RBP17.15■□□□□ 0.34
RNF220-204ENST00000372247 COG3Q96JB2 828 aa17.15■□□□□ 0.34
RNF220-204ENST00000372247 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
RNF220-204ENST00000372247 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
RNF220-204ENST00000372247 HSP90AB1P08238 724 aaKnown RBP17.14■□□□□ 0.33
RNF220-204ENST00000372247 SPRYD3Q8NCJ5 442 aa17.14■□□□□ 0.33
RNF220-204ENST00000372247 FBLN1P23142 703 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms