RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 BRPF1P55201 1214 aaPredicted RBP28.83■■■□□ 2.21
BRD3-202ENST00000371834 CDK12Q9NYV4 1490 aaPredicted RBP28.83■■■□□ 2.21
BRD3-202ENST00000371834 NUCB1Q02818 461 aa28.83■■■□□ 2.21
BRD3-202ENST00000371834 SPRYD3Q8NCJ5 442 aa28.83■■■□□ 2.21
BRD3-202ENST00000371834 COG3Q96JB2 828 aa28.83■■■□□ 2.21
BRD3-202ENST00000371834 ZNF428Q96B54 188 aa28.82■■■□□ 2.2
BRD3-202ENST00000371834 IFT57Q9NWB7 429 aa28.82■■■□□ 2.2
BRD3-202ENST00000371834 GNAI1P63096 354 aa28.82■■■□□ 2.2
BRD3-202ENST00000371834 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.82■■■□□ 2.2
BRD3-202ENST00000371834 C1orf115Q9H7X2 142 aa28.82■■■□□ 2.2
BRD3-202ENST00000371834 BRPF3Q9ULD4 1205 aa28.82■■■□□ 2.2
BRD3-202ENST00000371834 CCDC61Q9Y6R9 512 aa28.82■■■□□ 2.2
BRD3-202ENST00000371834 CALD1Q05682 793 aaKnown RBP28.81■■■□□ 2.2
BRD3-202ENST00000371834 FAM83GA6ND36 823 aa28.8■■■□□ 2.2
BRD3-202ENST00000371834 ZBTB7BO15156 539 aaPredicted RBP28.8■■■□□ 2.2
BRD3-202ENST00000371834 ZNF853P0CG23 659 aa28.8■■■□□ 2.2
BRD3-202ENST00000371834 RTN4Q9NQC3 1192 aaKnown RBP28.8■■■□□ 2.2
BRD3-202ENST00000371834 AATKQ6ZMQ8 1374 aa28.8■■■□□ 2.2
BRD3-202ENST00000371834 CHD1LQ86WJ1 897 aa28.78■■■□□ 2.2
BRD3-202ENST00000371834 DCTN1Q14203 1278 aa28.78■■■□□ 2.2
BRD3-202ENST00000371834 ESF1Q9H501 851 aaKnown RBP28.78■■■□□ 2.2
BRD3-202ENST00000371834 C8orf58Q8NAV2 365 aa28.77■■■□□ 2.2
BRD3-202ENST00000371834 PRR36Q9H6K5 1346 aa28.77■■■□□ 2.2
BRD3-202ENST00000371834 TWISTNBQ3B726 338 aaPredicted RBP28.76■■■□□ 2.19
BRD3-202ENST00000371834 PTCH1Q13635 1447 aa28.76■■■□□ 2.19
BRD3-202ENST00000371834 ARHGAP45Q92619 1136 aa28.75■■■□□ 2.19
BRD3-202ENST00000371834 MON2Q7Z3U7 1717 aa28.75■■■□□ 2.19
BRD3-202ENST00000371834 DLG5Q8TDM6 1919 aa28.75■■■□□ 2.19
BRD3-202ENST00000371834 CFAP44Q96MT7 982 aa28.74■■■□□ 2.19
BRD3-202ENST00000371834 ANKRD45Q5TZF3 282 aa28.73■■■□□ 2.19
BRD3-202ENST00000371834 PIK3R4Q99570 1358 aa28.73■■■□□ 2.19
BRD3-202ENST00000371834 TECPR2O15040 1411 aa28.71■■■□□ 2.19
BRD3-202ENST00000371834 ABCC4O15439 1325 aa28.71■■■□□ 2.19
BRD3-202ENST00000371834 LMOD3Q0VAK6 560 aa28.71■■■□□ 2.19
BRD3-202ENST00000371834 AEBP1Q8IUX7 1158 aa28.71■■■□□ 2.19
BRD3-202ENST00000371834 SIRT2Q8IXJ6 389 aa28.71■■■□□ 2.19
BRD3-202ENST00000371834 C3P01024 1663 aa28.7■■■□□ 2.19
BRD3-202ENST00000371834 SIRT1Q96EB6 747 aa28.7■■■□□ 2.19
BRD3-202ENST00000371834 ROBO2Q9HCK4 1378 aa28.7■■■□□ 2.18
BRD3-202ENST00000371834 KNDC1Q76NI1 1749 aa28.7■■■□□ 2.18
BRD3-202ENST00000371834 NUTM2FA1L443 756 aa28.7■■■□□ 2.18
BRD3-202ENST00000371834 AKAP12Q02952 1782 aa28.69■■■□□ 2.18
BRD3-202ENST00000371834 ZNF692Q9BU19 519 aaPredicted RBP28.68■■■□□ 2.18
BRD3-202ENST00000371834 HDGFP51858 240 aaKnown RBP28.68■■■□□ 2.18
BRD3-202ENST00000371834 ITSN1Q15811 1721 aa28.67■■■□□ 2.18
BRD3-202ENST00000371834 GCC1Q96CN9 775 aa28.67■■■□□ 2.18
BRD3-202ENST00000371834 TNRQ92752 1358 aa28.66■■■□□ 2.18
BRD3-202ENST00000371834 EIF4A2Q14240 407 aaKnown RBP28.66■■■□□ 2.18
BRD3-202ENST00000371834 SULT6B1Q6IMI4 303 aa28.66■■■□□ 2.18
BRD3-202ENST00000371834 CHMP4BQ9H444 224 aaKnown RBP28.66■■■□□ 2.18
BRD3-202ENST00000371834 TMEM2Q9UHN6 1383 aa28.64■■■□□ 2.18
BRD3-202ENST00000371834 BMP2KLQ5H9B9 411 aa28.64■■■□□ 2.18
BRD3-202ENST00000371834 KRT24Q2M2I5 525 aa28.64■■■□□ 2.17
BRD3-202ENST00000371834 TTC21BQ7Z4L5 1316 aa28.63■■■□□ 2.17
BRD3-202ENST00000371834 API5Q9BZZ5 524 aaKnown RBP28.62■■■□□ 2.17
BRD3-202ENST00000371834 ACEP12821 1306 aa28.62■■■□□ 2.17
BRD3-202ENST00000371834 RBM25P49756 843 aaKnown RBP28.62■■■□□ 2.17
BRD3-202ENST00000371834 HSCBQ8IWL3 235 aa28.61■■■□□ 2.17
BRD3-202ENST00000371834 ADAMTS13Q76LX8 1427 aa28.6■■■□□ 2.17
BRD3-202ENST00000371834 SOX12O15370 315 aa28.59■■■□□ 2.17
BRD3-202ENST00000371834 MCM10Q7L590 875 aa28.59■■■□□ 2.17
BRD3-202ENST00000371834 CHMP5Q9NZZ3 219 aa28.59■■■□□ 2.17
BRD3-202ENST00000371834 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.59■■■□□ 2.17
BRD3-202ENST00000371834 NRKQ7Z2Y5 1582 aa28.58■■■□□ 2.17
BRD3-202ENST00000371834 HSP90AB2PQ58FF8 381 aa28.58■■■□□ 2.17
BRD3-202ENST00000371834 UBR1Q8IWV7 1749 aa28.58■■■□□ 2.17
BRD3-202ENST00000371834 LTKP29376 864 aa28.57■■■□□ 2.16
BRD3-202ENST00000371834 MCM4P33991 863 aa28.56■■■□□ 2.16
BRD3-202ENST00000371834 TBC1D9Q6ZT07 1266 aa28.55■■■□□ 2.16
BRD3-202ENST00000371834 OVOS2A0A0J9YW53 1432 aa28.55■■■□□ 2.16
BRD3-202ENST00000371834 OVOS2Q6IE36 1432 aa28.55■■■□□ 2.16
BRD3-202ENST00000371834 SLC26A8Q96RN1 970 aa28.53■■■□□ 2.16
BRD3-202ENST00000371834 CHL1O00533 1208 aa28.52■■■□□ 2.16
BRD3-202ENST00000371834 KIF2CQ99661 725 aa28.52■■■□□ 2.16
BRD3-202ENST00000371834 PLEKHG3A1L390 1219 aa28.52■■■□□ 2.16
BRD3-202ENST00000371834 KIF13AQ9H1H9 1805 aa28.52■■■□□ 2.16
BRD3-202ENST00000371834 PEAK1Q9H792 1746 aa28.52■■■□□ 2.16
BRD3-202ENST00000371834 USP6P35125 1406 aa28.52■■■□□ 2.16
BRD3-202ENST00000371834 SNX21Q969T3 373 aa28.5■■■□□ 2.15
BRD3-202ENST00000371834 INTS3Q68E01 1043 aaKnown RBP28.5■■■□□ 2.15
BRD3-202ENST00000371834 TOPAZ1Q8N9V7 1692 aa28.49■■■□□ 2.15
BRD3-202ENST00000371834 RGS12O14924 1447 aa28.49■■■□□ 2.15
BRD3-202ENST00000371834 NCOA3Q9Y6Q9 1424 aa28.48■■■□□ 2.15
BRD3-202ENST00000371834 GSPT1P15170 499 aaKnown RBP28.48■■■□□ 2.15
BRD3-202ENST00000371834 DCTPP1Q9H773 170 aa28.48■■■□□ 2.15
BRD3-202ENST00000371834 MIS18AQ9NYP9 233 aa28.48■■■□□ 2.15
BRD3-202ENST00000371834 KIF24Q5T7B8 1368 aa28.48■■■□□ 2.15
BRD3-202ENST00000371834 CEBPAP49715 358 aaPredicted RBP28.47■■■□□ 2.15
BRD3-202ENST00000371834 PTPRUQ92729 1446 aa28.47■■■□□ 2.15
BRD3-202ENST00000371834 C16orf71Q8IYS4 520 aaPredicted RBP28.47■■■□□ 2.15
BRD3-202ENST00000371834 PLEKHG1Q9ULL1 1385 aa28.47■■■□□ 2.15
BRD3-202ENST00000371834 CD2BP2O95400 341 aaKnown RBP28.46■■■□□ 2.15
BRD3-202ENST00000371834 PLEKHM2Q8IWE5 1019 aa28.46■■■□□ 2.15
BRD3-202ENST00000371834 GZF1Q9H116 711 aaPredicted RBP28.46■■■□□ 2.15
BRD3-202ENST00000371834 FOXO3O43524 673 aa28.46■■■□□ 2.15
BRD3-202ENST00000371834 DDIT3P35638 169 aa28.46■■■□□ 2.15
BRD3-202ENST00000371834 RBM42Q9BTD8 480 aaKnown RBP28.45■■■□□ 2.14
BRD3-202ENST00000371834 HSP90AB1P08238 724 aaKnown RBP28.44■■■□□ 2.14
BRD3-202ENST00000371834 ARXQ96QS3 562 aa28.44■■■□□ 2.14
BRD3-202ENST00000371834 ATP10DQ9P241 1426 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms