RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 RGPD1P0DJD0 1748 aa15.51■□□□□ 0.07
EXOSC1-202ENST00000370885 EDC4Q6P2E9 1401 aaKnown RBP15.51■□□□□ 0.07
EXOSC1-202ENST00000370885 WDR17Q8IZU2 1322 aa15.5■□□□□ 0.07
EXOSC1-202ENST00000370885 TRIM37O94972 964 aa15.5■□□□□ 0.07
EXOSC1-202ENST00000370885 HDGFL2Q7Z4V5 671 aaPredicted RBP15.5■□□□□ 0.07
EXOSC1-202ENST00000370885 THRAP3Q9Y2W1 955 aaKnown RBP15.5■□□□□ 0.07
EXOSC1-202ENST00000370885 FBLN1P23142 703 aa15.49■□□□□ 0.07
EXOSC1-202ENST00000370885 SF3B2Q13435 895 aaKnown RBP15.49■□□□□ 0.07
EXOSC1-202ENST00000370885 WNK3Q9BYP7 1800 aa15.49■□□□□ 0.07
EXOSC1-202ENST00000370885 LRRC37A3O60309 1634 aa15.49■□□□□ 0.07
EXOSC1-202ENST00000370885 OVOS2A0A0J9YW53 1432 aa15.49■□□□□ 0.07
EXOSC1-202ENST00000370885 OVOS2Q6IE36 1432 aa15.49■□□□□ 0.07
EXOSC1-202ENST00000370885 PEAK1Q9H792 1746 aa15.48■□□□□ 0.07
EXOSC1-202ENST00000370885 FAM196AQ6ZSG2 479 aa15.48■□□□□ 0.07
EXOSC1-202ENST00000370885 TOM1L2Q6ZVM7 507 aa15.48■□□□□ 0.07
EXOSC1-202ENST00000370885 TERF2IPQ9NYB0 399 aa15.48■□□□□ 0.07
EXOSC1-202ENST00000370885 LTN1O94822 1766 aa15.48■□□□□ 0.07
EXOSC1-202ENST00000370885 DISP2A7MBM2 1401 aa15.47■□□□□ 0.07
EXOSC1-202ENST00000370885 PDE3BQ13370 1112 aa15.47■□□□□ 0.07
EXOSC1-202ENST00000370885 EZH2Q15910 746 aaKnown RBP15.47■□□□□ 0.07
EXOSC1-202ENST00000370885 PTF1AQ7RTS3 328 aa15.47■□□□□ 0.07
EXOSC1-202ENST00000370885 BAG6P46379 1132 aa15.46■□□□□ 0.07
EXOSC1-202ENST00000370885 CAMKK2Q96RR4 588 aa15.46■□□□□ 0.07
EXOSC1-202ENST00000370885 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
EXOSC1-202ENST00000370885 CARD10Q9BWT7 1032 aa15.45■□□□□ 0.06
EXOSC1-202ENST00000370885 MARCH10Q8NA82 808 aaPredicted RBP15.44■□□□□ 0.06
EXOSC1-202ENST00000370885 TIMELESSQ9UNS1 1208 aa15.44■□□□□ 0.06
EXOSC1-202ENST00000370885 SBF2Q86WG5 1849 aa15.44■□□□□ 0.06
EXOSC1-202ENST00000370885 ANKRD36BQ8N2N9 1353 aa15.44■□□□□ 0.06
EXOSC1-202ENST00000370885 NINLQ9Y2I6 1382 aa15.44■□□□□ 0.06
EXOSC1-202ENST00000370885 ABCC6O95255 1503 aa15.43■□□□□ 0.06
EXOSC1-202ENST00000370885 PSDA5PKW4 1024 aaPredicted RBP15.43■□□□□ 0.06
EXOSC1-202ENST00000370885 APBA3O96018 575 aa15.43■□□□□ 0.06
EXOSC1-202ENST00000370885 TMF1P82094 1093 aa15.43■□□□□ 0.06
EXOSC1-202ENST00000370885 MYOM1P52179 1685 aa15.43■□□□□ 0.06
EXOSC1-202ENST00000370885 ERBB3P21860 1342 aa15.43■□□□□ 0.06
EXOSC1-202ENST00000370885 CSB-PGBD3P0DP91 1061 aa15.42■□□□□ 0.06
EXOSC1-202ENST00000370885 DDB1Q16531 1140 aa15.42■□□□□ 0.06
EXOSC1-202ENST00000370885 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
EXOSC1-202ENST00000370885 FYB1O15117 783 aa15.41■□□□□ 0.06
EXOSC1-202ENST00000370885 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
EXOSC1-202ENST00000370885 RREB1Q92766 1687 aa15.4■□□□□ 0.06
EXOSC1-202ENST00000370885 MAP3K19Q56UN5 1328 aa15.4■□□□□ 0.06
EXOSC1-202ENST00000370885 SLC24A1O60721 1099 aa15.39■□□□□ 0.05
EXOSC1-202ENST00000370885 IP6K1Q92551 441 aa15.39■□□□□ 0.05
EXOSC1-202ENST00000370885 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
EXOSC1-202ENST00000370885 OVOS2A0A0G2JMS6 1433 aa15.39■□□□□ 0.05
EXOSC1-202ENST00000370885 NUP188Q5SRE5 1749 aa15.38■□□□□ 0.05
EXOSC1-202ENST00000370885 R3HDM1Q15032 1099 aaKnown RBP15.38■□□□□ 0.05
EXOSC1-202ENST00000370885 CCER1Q8TC90 406 aaPredicted RBP15.38■□□□□ 0.05
EXOSC1-202ENST00000370885 COG3Q96JB2 828 aa15.38■□□□□ 0.05
EXOSC1-202ENST00000370885 NLRP2Q9NX02 1062 aa15.38■□□□□ 0.05
EXOSC1-202ENST00000370885 RGPD2P0DJD1 1756 aa15.38■□□□□ 0.05
EXOSC1-202ENST00000370885 CCDC7Q96M83 1385 aa15.37■□□□□ 0.05
EXOSC1-202ENST00000370885 HOXC9P31274 260 aa15.36■□□□□ 0.05
EXOSC1-202ENST00000370885 RRS1Q15050 365 aaKnown RBP15.36■□□□□ 0.05
EXOSC1-202ENST00000370885 LTV1Q96GA3 475 aaPredicted RBP15.36■□□□□ 0.05
EXOSC1-202ENST00000370885 CDCA7Q9BWT1 371 aaPredicted RBP15.36■□□□□ 0.05
EXOSC1-202ENST00000370885 BCL9O00512 1426 aa15.35■□□□□ 0.05
EXOSC1-202ENST00000370885 EXOC5O00471 708 aa15.35■□□□□ 0.05
EXOSC1-202ENST00000370885 KCNQ2O43526 872 aa15.35■□□□□ 0.05
EXOSC1-202ENST00000370885 PROM2Q8N271 834 aa15.35■□□□□ 0.05
EXOSC1-202ENST00000370885 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
EXOSC1-202ENST00000370885 TNS2Q63HR2 1409 aa15.34■□□□□ 0.05
EXOSC1-202ENST00000370885 KIF20BQ96Q89 1820 aa15.34■□□□□ 0.05
EXOSC1-202ENST00000370885 HSPA5P11021 654 aaKnown RBP15.34■□□□□ 0.05
EXOSC1-202ENST00000370885 IL2RBP14784 551 aa15.33■□□□□ 0.04
EXOSC1-202ENST00000370885 BCL11BQ9C0K0 894 aaPredicted RBP15.33■□□□□ 0.04
EXOSC1-202ENST00000370885 PARD3Q8TEW0 1356 aa15.33■□□□□ 0.04
EXOSC1-202ENST00000370885 NSD3Q9BZ95 1437 aa15.33■□□□□ 0.04
EXOSC1-202ENST00000370885 C11orf95C9JLR9 678 aaPredicted RBP15.32■□□□□ 0.04
EXOSC1-202ENST00000370885 CDCA8Q53HL2 280 aa15.32■□□□□ 0.04
EXOSC1-202ENST00000370885 LRP5O75197 1615 aa15.32■□□□□ 0.04
EXOSC1-202ENST00000370885 PLSCR1O15162 318 aa15.31■□□□□ 0.04
EXOSC1-202ENST00000370885 AMPHP49418 695 aa15.31■□□□□ 0.04
EXOSC1-202ENST00000370885 RGPD3A6NKT7 1758 aaPredicted RBP15.3■□□□□ 0.04
EXOSC1-202ENST00000370885 HSP90AB2PQ58FF8 381 aa15.3■□□□□ 0.04
EXOSC1-202ENST00000370885 NBPF6Q5VWK0 638 aa15.3■□□□□ 0.04
EXOSC1-202ENST00000370885 RGPD4Q7Z3J3 1758 aa15.3■□□□□ 0.04
EXOSC1-202ENST00000370885 ACSBG1Q96GR2 724 aa15.3■□□□□ 0.04
EXOSC1-202ENST00000370885 NBPF4Q96M43 638 aa15.3■□□□□ 0.04
EXOSC1-202ENST00000370885 ANO8Q9HCE9 1232 aaPredicted RBP15.3■□□□□ 0.04
EXOSC1-202ENST00000370885 SHANK3Q9BYB0 1731 aa15.29■□□□□ 0.04
EXOSC1-202ENST00000370885 ZEB1P37275 1124 aaPredicted RBP15.29■□□□□ 0.04
EXOSC1-202ENST00000370885 USHBP1Q8N6Y0 703 aa15.29■□□□□ 0.04
EXOSC1-202ENST00000370885 NHSQ6T4R5 1651 aa15.28■□□□□ 0.04
EXOSC1-202ENST00000370885 MEGF6O75095 1541 aa15.28■□□□□ 0.04
EXOSC1-202ENST00000370885 EIF4G2P78344 907 aaKnown RBP eCLIP15.28■□□□□ 0.04
EXOSC1-202ENST00000370885 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
EXOSC1-202ENST00000370885 EMILIN1Q9Y6C2 1016 aa15.28■□□□□ 0.04
EXOSC1-202ENST00000370885 RTL1A6NKG5 1358 aa15.27■□□□□ 0.04
EXOSC1-202ENST00000370885 PDGFDQ9GZP0 370 aaPredicted RBP15.27■□□□□ 0.04
EXOSC1-202ENST00000370885 DDX54Q8TDD1 881 aaKnown RBP15.26■□□□□ 0.03
EXOSC1-202ENST00000370885 INSRP06213 1382 aa15.25■□□□□ 0.03
EXOSC1-202ENST00000370885 BTAF1O14981 1849 aa15.25■□□□□ 0.03
EXOSC1-202ENST00000370885 MAP2P11137 1827 aaKnown RBP15.24■□□□□ 0.03
EXOSC1-202ENST00000370885 ANKRD26Q9UPS8 1709 aa15.24■□□□□ 0.03
EXOSC1-202ENST00000370885 TXNRD1Q16881 649 aa15.24■□□□□ 0.03
EXOSC1-202ENST00000370885 KAT6BQ8WYB5 2073 aa15.24■□□□□ 0.03
EXOSC1-202ENST00000370885 NBPF14Q5TI25 921 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms