RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 LMBRD1Q9NUN5 540 aa12.66□□□□□ -0.38
PRPF38B-201ENST00000370021 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRPF38B-201ENST00000370021 NOL7Q9UMY1 257 aaKnown RBP12.66□□□□□ -0.38
PRPF38B-201ENST00000370021 INSRP06213 1382 aa12.66□□□□□ -0.38
PRPF38B-201ENST00000370021 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
PRPF38B-201ENST00000370021 MIS18AQ9NYP9 233 aa12.66□□□□□ -0.38
PRPF38B-201ENST00000370021 EXOC6BQ9Y2D4 811 aa12.66□□□□□ -0.38
PRPF38B-201ENST00000370021 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRPF38B-201ENST00000370021 IQGAP1P46940 1657 aa12.65□□□□□ -0.38
PRPF38B-201ENST00000370021 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
PRPF38B-201ENST00000370021 VPS37CA5D8V6 355 aaPredicted RBP12.65□□□□□ -0.38
PRPF38B-201ENST00000370021 GPT2Q8TD30 523 aa12.65□□□□□ -0.38
PRPF38B-201ENST00000370021 EIF2AK4Q9P2K8 1649 aaKnown RBP12.65□□□□□ -0.38
PRPF38B-201ENST00000370021 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
PRPF38B-201ENST00000370021 PPP1R9BQ96SB3 815 aa12.65□□□□□ -0.38
PRPF38B-201ENST00000370021 KRT24Q2M2I5 525 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 IFT57Q9NWB7 429 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 KIF3AQ9Y496 699 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 ARHGAP5Q13017 1502 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 PIK3C2GO75747 1445 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 DYNC1I1O14576 645 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 SDSP20132 328 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 OS9Q13438 667 aaPredicted RBP12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 LRSAM1Q6UWE0 723 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 TERF2IPQ9NYB0 399 aa12.64□□□□□ -0.39
PRPF38B-201ENST00000370021 WDR7Q9Y4E6 1490 aa12.63□□□□□ -0.39
PRPF38B-201ENST00000370021 ADCY5O95622 1261 aa12.63□□□□□ -0.39
PRPF38B-201ENST00000370021 CGNQ9P2M7 1197 aaKnown RBP12.63□□□□□ -0.39
PRPF38B-201ENST00000370021 NAP1L2Q9ULW6 460 aaPredicted RBP12.63□□□□□ -0.39
PRPF38B-201ENST00000370021 PHF14O94880 888 aa12.63□□□□□ -0.39
PRPF38B-201ENST00000370021 MBD3O95983 291 aa12.63□□□□□ -0.39
PRPF38B-201ENST00000370021 PDCL2Q8N4E4 241 aa12.63□□□□□ -0.39
PRPF38B-201ENST00000370021 CEP152O94986 1710 aa12.62□□□□□ -0.39
PRPF38B-201ENST00000370021 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
PRPF38B-201ENST00000370021 CAMK4Q16566 473 aa12.62□□□□□ -0.39
PRPF38B-201ENST00000370021 SPHKAPQ2M3C7 1700 aa12.62□□□□□ -0.39
PRPF38B-201ENST00000370021 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
PRPF38B-201ENST00000370021 F6X3S4 739 aa12.62□□□□□ -0.39
PRPF38B-201ENST00000370021 MTERF4Q7Z6M4 381 aaKnown RBP12.62□□□□□ -0.39
PRPF38B-201ENST00000370021 SCAF11Q99590 1463 aaKnown RBP12.62□□□□□ -0.39
PRPF38B-201ENST00000370021 ERC2O15083 957 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 GADD45BO75293 160 aaPredicted RBP12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 TMX3Q96JJ7 454 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 KIF2CQ99661 725 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 API5Q9BZZ5 524 aaKnown RBP12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 CWC22Q9HCG8 908 aaKnown RBP12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 MYOM1P52179 1685 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 ERCC6L2Q5T890 1561 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 FOSBP53539 338 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 GIMAP6Q6P9H5 292 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 IL1RAPL2Q9NP60 686 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 DEPDC5O75140 1603 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 ERICH4A6NGS2 130 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 ZBTB7BO15156 539 aaPredicted RBP12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 GSPT1P15170 499 aaKnown RBP12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 PLEKHM2Q8IWE5 1019 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 PHACTR3Q96KR7 559 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
PRPF38B-201ENST00000370021 FERMT3Q86UX7 667 aa12.6□□□□□ -0.39
PRPF38B-201ENST00000370021 ZBTB9Q96C00 473 aa12.6□□□□□ -0.39
PRPF38B-201ENST00000370021 C8orf58Q8NAV2 365 aa12.6□□□□□ -0.39
PRPF38B-201ENST00000370021 USP26Q9BXU7 913 aa12.6□□□□□ -0.39
PRPF38B-201ENST00000370021 GNAI1P63096 354 aa12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 BBXQ8WY36 941 aaPredicted RBP12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 C16orf45Q96MC5 204 aaPredicted RBP12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 POLR3AO14802 1390 aaPredicted RBP12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 HMMRO75330 724 aa12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 U2AF2P26368 475 aaKnown RBP eCLIP12.59□□□□□ -0.391e-7■■■■□ 19.9
PRPF38B-201ENST00000370021 ZNF445P59923 1031 aa12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 ABCC2Q92887 1545 aa12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 DUOX2Q9NRD8 1548 aa12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 TTC22Q5TAA0 569 aa12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
PRPF38B-201ENST00000370021 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
PRPF38B-201ENST00000370021 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRPF38B-201ENST00000370021 V9GYY5 206 aaPredicted RBP12.58□□□□□ -0.4
PRPF38B-201ENST00000370021 ZCCHC11Q5TAX3 1644 aaKnown RBP12.58□□□□□ -0.4
PRPF38B-201ENST00000370021 CCDC94Q9BW85 323 aaPredicted RBP12.58□□□□□ -0.4
PRPF38B-201ENST00000370021 VGLL3A8MV65 326 aa12.58□□□□□ -0.4
PRPF38B-201ENST00000370021 CNPY2Q9Y2B0 182 aa12.58□□□□□ -0.4
PRPF38B-201ENST00000370021 MBIPQ9NS73 344 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 SMC3Q9UQE7 1217 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 EMILIN1Q9Y6C2 1016 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 CT47B1P0C2W7 299 aaPredicted RBP12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 ABCC1P33527 1531 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 MCM10Q7L590 875 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 MEIS3Q99687 375 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 NLRP1Q9C000 1473 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 PRAM1Q96QH2 718 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 TRIM5Q9C035 493 aa12.57□□□□□ -0.4
PRPF38B-201ENST00000370021 AK9Q5TCS8 1911 aa12.56□□□□□ -0.4
PRPF38B-201ENST00000370021 FGD1P98174 961 aa12.56□□□□□ -0.4
PRPF38B-201ENST00000370021 CEBPZQ03701 1054 aaKnown RBP12.56□□□□□ -0.4
PRPF38B-201ENST00000370021 SIRT2Q8IXJ6 389 aa12.56□□□□□ -0.4
PRPF38B-201ENST00000370021 CKAP2LQ8IYA6 745 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms