RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 SPATA31A7Q8IWB4 1347 aa18■□□□□ 0.47
PMF1-201ENST00000368273 PER1O15534 1290 aaPredicted RBP18■□□□□ 0.47
PMF1-201ENST00000368273 ONECUT3O60422 494 aaPredicted RBP18■□□□□ 0.47
PMF1-201ENST00000368273 EVA1CP58658 441 aa18■□□□□ 0.47
PMF1-201ENST00000368273 CARD14Q9BXL6 1004 aa18■□□□□ 0.47
PMF1-201ENST00000368273 COL18A1P39060 1754 aa17.99■□□□□ 0.47
PMF1-201ENST00000368273 FYB1O15117 783 aa17.99■□□□□ 0.47
PMF1-201ENST00000368273 COG3Q96JB2 828 aa17.99■□□□□ 0.47
PMF1-201ENST00000368273 COL5A2P05997 1499 aaPredicted RBP17.98■□□□□ 0.47
PMF1-201ENST00000368273 SPATA31A1Q5TZJ5 1347 aa17.98■□□□□ 0.47
PMF1-201ENST00000368273 AXIN2Q9Y2T1 843 aa17.97■□□□□ 0.47
PMF1-201ENST00000368273 NSD3Q9BZ95 1437 aa17.97■□□□□ 0.47
PMF1-201ENST00000368273 FAM98CQ17RN3 349 aaKnown RBP17.96■□□□□ 0.47
PMF1-201ENST00000368273 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
PMF1-201ENST00000368273 SEPT12Q8IYM1 358 aa17.96■□□□□ 0.47
PMF1-201ENST00000368273 GGNBP2Q9H3C7 697 aa17.96■□□□□ 0.47
PMF1-201ENST00000368273 ABCC6O95255 1503 aa17.96■□□□□ 0.47
PMF1-201ENST00000368273 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
PMF1-201ENST00000368273 LTN1O94822 1766 aa17.94■□□□□ 0.46
PMF1-201ENST00000368273 RGPD5Q99666 1765 aa17.94■□□□□ 0.46
PMF1-201ENST00000368273 CRB1P82279 1406 aa17.92■□□□□ 0.46
PMF1-201ENST00000368273 RALBP1Q15311 655 aa17.92■□□□□ 0.46
PMF1-201ENST00000368273 USP35Q9P2H5 1018 aa17.92■□□□□ 0.46
PMF1-201ENST00000368273 KNSTRNQ9Y448 316 aa17.92■□□□□ 0.46
PMF1-201ENST00000368273 BRWD3Q6RI45 1802 aa17.92■□□□□ 0.46
PMF1-201ENST00000368273 CGNL1Q0VF96 1302 aa17.92■□□□□ 0.46
PMF1-201ENST00000368273 WDR17Q8IZU2 1322 aa17.92■□□□□ 0.46
PMF1-201ENST00000368273 THSD7AQ9UPZ6 1657 aa17.91■□□□□ 0.46
PMF1-201ENST00000368273 A0A0G2JS52 829 aa17.91■□□□□ 0.46
PMF1-201ENST00000368273 MYT1Q01538 1121 aa17.91■□□□□ 0.46
PMF1-201ENST00000368273 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
PMF1-201ENST00000368273 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
PMF1-201ENST00000368273 UPF1Q92900 1129 aaKnown RBP eCLIP17.91■□□□□ 0.46
PMF1-201ENST00000368273 NPC1L1Q9UHC9 1359 aa17.91■□□□□ 0.46
PMF1-201ENST00000368273 FBLN1P23142 703 aa17.9■□□□□ 0.46
PMF1-201ENST00000368273 THRAP3Q9Y2W1 955 aaKnown RBP17.9■□□□□ 0.46
PMF1-201ENST00000368273 PARD3Q8TEW0 1356 aa17.9■□□□□ 0.46
PMF1-201ENST00000368273 TOM1L2Q6ZVM7 507 aa17.89■□□□□ 0.45
PMF1-201ENST00000368273 IP6K1Q92551 441 aa17.89■□□□□ 0.45
PMF1-201ENST00000368273 MAP3K19Q56UN5 1328 aa17.89■□□□□ 0.45
PMF1-201ENST00000368273 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
PMF1-201ENST00000368273 AMER1Q5JTC6 1135 aaPredicted RBP17.88■□□□□ 0.45
PMF1-201ENST00000368273 KRT27Q7Z3Y8 459 aa17.88■□□□□ 0.45
PMF1-201ENST00000368273 CNGB1Q14028 1251 aaPredicted RBP17.87■□□□□ 0.45
PMF1-201ENST00000368273 CARD10Q9BWT7 1032 aa17.87■□□□□ 0.45
PMF1-201ENST00000368273 ERBB3P21860 1342 aa17.87■□□□□ 0.45
PMF1-201ENST00000368273 BLMP54132 1417 aaPredicted RBP17.87■□□□□ 0.45
PMF1-201ENST00000368273 AMPHP49418 695 aa17.86■□□□□ 0.45
PMF1-201ENST00000368273 MYBBP1AQ9BQG0 1328 aaKnown RBP17.86■□□□□ 0.45
PMF1-201ENST00000368273 HOXC9P31274 260 aa17.85■□□□□ 0.45
PMF1-201ENST00000368273 RRS1Q15050 365 aaKnown RBP17.85■□□□□ 0.45
PMF1-201ENST00000368273 CC2D1BQ5T0F9 858 aaKnown RBP17.85■□□□□ 0.45
PMF1-201ENST00000368273 ANKRD24Q8TF21 1146 aa17.85■□□□□ 0.45
PMF1-201ENST00000368273 RTL1A6NKG5 1358 aa17.84■□□□□ 0.45
PMF1-201ENST00000368273 ANKRD26Q9UPS8 1709 aa17.84■□□□□ 0.45
PMF1-201ENST00000368273 EP400Q96L91 3159 aa17.83■□□□□ 0.45
PMF1-201ENST00000368273 NSD2O96028 1365 aa17.83■□□□□ 0.45
PMF1-201ENST00000368273 CCDC184Q52MB2 194 aa17.83■□□□□ 0.44
PMF1-201ENST00000368273 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
PMF1-201ENST00000368273 PARP4Q9UKK3 1724 aaKnown RBP17.82■□□□□ 0.44
PMF1-201ENST00000368273 MRS2Q9HD23 443 aa17.82■□□□□ 0.44
PMF1-201ENST00000368273 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
PMF1-201ENST00000368273 KIF24Q5T7B8 1368 aa17.81■□□□□ 0.44
PMF1-201ENST00000368273 LTV1Q96GA3 475 aaPredicted RBP17.81■□□□□ 0.44
PMF1-201ENST00000368273 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
PMF1-201ENST00000368273 WNK3Q9BYP7 1800 aa17.81■□□□□ 0.44
PMF1-201ENST00000368273 PDE3BQ13370 1112 aa17.8■□□□□ 0.44
PMF1-201ENST00000368273 CCDC125Q86Z20 511 aa17.8■□□□□ 0.44
PMF1-201ENST00000368273 PEAK1Q9H792 1746 aa17.8■□□□□ 0.44
PMF1-201ENST00000368273 FAM208AQ9UK61 1670 aaKnown RBP17.8■□□□□ 0.44
PMF1-201ENST00000368273 FLT4P35916 1363 aa17.79■□□□□ 0.44
PMF1-201ENST00000368273 FAM182BQ5T319 152 aa17.79■□□□□ 0.44
PMF1-201ENST00000368273 EMILIN1Q9Y6C2 1016 aa17.79■□□□□ 0.44
PMF1-201ENST00000368273 DISP2A7MBM2 1401 aa17.79■□□□□ 0.44
PMF1-201ENST00000368273 INSRP06213 1382 aa17.79■□□□□ 0.44
PMF1-201ENST00000368273 MAP2P11137 1827 aaKnown RBP17.78■□□□□ 0.44
PMF1-201ENST00000368273 HSP90AB2PQ58FF8 381 aa17.78■□□□□ 0.44
PMF1-201ENST00000368273 LRRC37A3O60309 1634 aa17.77■□□□□ 0.44
PMF1-201ENST00000368273 TNNT2P45379 298 aaPredicted RBP17.77■□□□□ 0.44
PMF1-201ENST00000368273 DDB1Q16531 1140 aa17.77■□□□□ 0.44
PMF1-201ENST00000368273 MORC1Q86VD1 984 aa17.77■□□□□ 0.44
PMF1-201ENST00000368273 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
PMF1-201ENST00000368273 FAM196AQ6ZSG2 479 aa17.76■□□□□ 0.43
PMF1-201ENST00000368273 SMG6Q86US8 1419 aaKnown RBP17.75■□□□□ 0.43
PMF1-201ENST00000368273 PPM1GO15355 546 aaPredicted RBP17.75■□□□□ 0.43
PMF1-201ENST00000368273 EXOC5O00471 708 aa17.74■□□□□ 0.43
PMF1-201ENST00000368273 IL2RBP14784 551 aa17.74■□□□□ 0.43
PMF1-201ENST00000368273 PPP2R1AP30153 589 aa17.74■□□□□ 0.43
PMF1-201ENST00000368273 RGPD2P0DJD1 1756 aa17.74■□□□□ 0.43
PMF1-201ENST00000368273 NBPF6Q5VWK0 638 aa17.73■□□□□ 0.43
PMF1-201ENST00000368273 NBPF4Q96M43 638 aa17.73■□□□□ 0.43
PMF1-201ENST00000368273 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
PMF1-201ENST00000368273 SF3B2Q13435 895 aaKnown RBP17.72■□□□□ 0.43
PMF1-201ENST00000368273 MARCH10Q8NA82 808 aaPredicted RBP17.71■□□□□ 0.43
PMF1-201ENST00000368273 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
PMF1-201ENST00000368273 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
PMF1-201ENST00000368273 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
PMF1-201ENST00000368273 RGPD1P0DJD0 1748 aa17.7■□□□□ 0.42
PMF1-201ENST00000368273 FAM9BQ8IZU0 186 aa17.7■□□□□ 0.42
PMF1-201ENST00000368273 TRIM37O94972 964 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms