RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
CCT3-206ENST00000368262 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
CCT3-206ENST00000368262 RABEP1Q15276 862 aa17.43■□□□□ 0.38
CCT3-206ENST00000368262 TMEM132EQ6IEE7 984 aa17.43■□□□□ 0.38
CCT3-206ENST00000368262 PDLIM2Q96JY6 352 aa17.43■□□□□ 0.38
CCT3-206ENST00000368262 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
CCT3-206ENST00000368262 CD163L1Q9NR16 1453 aa17.43■□□□□ 0.38
CCT3-206ENST00000368262 ANKRD45Q5TZF3 282 aa17.43■□□□□ 0.38
CCT3-206ENST00000368262 DDX49Q9Y6V7 483 aaKnown RBP17.43■□□□□ 0.38
CCT3-206ENST00000368262 ABCC4O15439 1325 aa17.42■□□□□ 0.38
CCT3-206ENST00000368262 ABCC3O15438 1527 aa17.42■□□□□ 0.38
CCT3-206ENST00000368262 NUCB2P80303 420 aa17.42■□□□□ 0.38
CCT3-206ENST00000368262 RBM42Q9BTD8 480 aaKnown RBP17.42■□□□□ 0.38
CCT3-206ENST00000368262 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
CCT3-206ENST00000368262 ZNF500O60304 480 aaPredicted RBP17.42■□□□□ 0.38
CCT3-206ENST00000368262 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
CCT3-206ENST00000368262 FOXD4L1Q9NU39 408 aa17.4■□□□□ 0.38
CCT3-206ENST00000368262 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
CCT3-206ENST00000368262 MSNP26038 577 aaKnown RBP17.4■□□□□ 0.38
CCT3-206ENST00000368262 SIRT2Q8IXJ6 389 aa17.4■□□□□ 0.38
CCT3-206ENST00000368262 LMBRD1Q9NUN5 540 aa17.4■□□□□ 0.38
CCT3-206ENST00000368262 NOL7Q9UMY1 257 aaKnown RBP17.4■□□□□ 0.38
CCT3-206ENST00000368262 ATAD2Q6PL18 1390 aa17.39■□□□□ 0.37
CCT3-206ENST00000368262 MAP7D2Q96T17 732 aa17.39■□□□□ 0.37
CCT3-206ENST00000368262 DIAPH1O60610 1272 aaKnown RBP17.38■□□□□ 0.37
CCT3-206ENST00000368262 FCHSD2O94868 740 aa17.38■□□□□ 0.37
CCT3-206ENST00000368262 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
CCT3-206ENST00000368262 VAMP4O75379 141 aa17.38■□□□□ 0.37
CCT3-206ENST00000368262 CHGAP10645 457 aaKnown RBP17.38■□□□□ 0.37
CCT3-206ENST00000368262 ZSCAN23Q3MJ62 389 aa17.38■□□□□ 0.37
CCT3-206ENST00000368262 PTPRMP28827 1452 aa17.37■□□□□ 0.37
CCT3-206ENST00000368262 FYB1O15117 783 aa17.37■□□□□ 0.37
CCT3-206ENST00000368262 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
CCT3-206ENST00000368262 GSPT1P15170 499 aaKnown RBP17.37■□□□□ 0.37
CCT3-206ENST00000368262 CALD1Q05682 793 aaKnown RBP17.37■□□□□ 0.37
CCT3-206ENST00000368262 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
CCT3-206ENST00000368262 DLG5Q8TDM6 1919 aa17.36■□□□□ 0.37
CCT3-206ENST00000368262 MCM5P33992 734 aa17.36■□□□□ 0.37
CCT3-206ENST00000368262 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.36■□□□□ 0.37
CCT3-206ENST00000368262 PLEKHM2Q8IWE5 1019 aa17.35■□□□□ 0.37
CCT3-206ENST00000368262 RBSNQ9H1K0 784 aa17.35■□□□□ 0.37
CCT3-206ENST00000368262 MLH3Q9UHC1 1453 aa17.35■□□□□ 0.37
CCT3-206ENST00000368262 VGFO15240 615 aaPredicted RBP17.34■□□□□ 0.37
CCT3-206ENST00000368262 TTC22Q5TAA0 569 aa17.34■□□□□ 0.37
CCT3-206ENST00000368262 MCTP1Q6DN14 999 aa17.34■□□□□ 0.37
CCT3-206ENST00000368262 USP26Q9BXU7 913 aa17.34■□□□□ 0.37
CCT3-206ENST00000368262 TERF2IPQ9NYB0 399 aa17.34■□□□□ 0.37
CCT3-206ENST00000368262 ZNF853P0CG23 659 aa17.33■□□□□ 0.37
CCT3-206ENST00000368262 CAVIN1Q6NZI2 390 aaKnown RBP17.33■□□□□ 0.37
CCT3-206ENST00000368262 C1orf115Q9H7X2 142 aa17.33■□□□□ 0.37
CCT3-206ENST00000368262 IFT57Q9NWB7 429 aa17.33■□□□□ 0.36
CCT3-206ENST00000368262 MAP2P11137 1827 aaKnown RBP17.32■□□□□ 0.36
CCT3-206ENST00000368262 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
CCT3-206ENST00000368262 DCTPP1Q9H773 170 aa17.32■□□□□ 0.36
CCT3-206ENST00000368262 ZKSCAN5Q9Y2L8 839 aa17.32■□□□□ 0.36
CCT3-206ENST00000368262 CSPP1Q1MSJ5 1256 aa17.31■□□□□ 0.36
CCT3-206ENST00000368262 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
CCT3-206ENST00000368262 MYO5BQ9ULV0 1848 aa17.31■□□□□ 0.36
CCT3-206ENST00000368262 GNAI1P63096 354 aa17.31■□□□□ 0.36
CCT3-206ENST00000368262 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
CCT3-206ENST00000368262 INTS3Q68E01 1043 aaKnown RBP17.3■□□□□ 0.36
CCT3-206ENST00000368262 GPT2Q8TD30 523 aa17.3■□□□□ 0.36
CCT3-206ENST00000368262 POGZQ7Z3K3 1410 aa17.29■□□□□ 0.36
CCT3-206ENST00000368262 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
CCT3-206ENST00000368262 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
CCT3-206ENST00000368262 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
CCT3-206ENST00000368262 LRSAM1Q6UWE0 723 aa17.29■□□□□ 0.36
CCT3-206ENST00000368262 MTERF4Q7Z6M4 381 aaKnown RBP17.29■□□□□ 0.36
CCT3-206ENST00000368262 ZDHHC9Q9Y397 364 aa17.29■□□□□ 0.36
CCT3-206ENST00000368262 R3HCC1Q9Y3T6 440 aaKnown RBP17.28■□□□□ 0.36
CCT3-206ENST00000368262 CPSF1Q10570 1443 aaKnown RBP17.28■□□□□ 0.36
CCT3-206ENST00000368262 TSPYL6Q8N831 410 aa17.28■□□□□ 0.36
CCT3-206ENST00000368262 CCDC39Q9UFE4 941 aa17.28■□□□□ 0.36
CCT3-206ENST00000368262 ARHGEF40Q8TER5 1519 aa17.28■□□□□ 0.36
CCT3-206ENST00000368262 DYNC1I1O14576 645 aa17.27■□□□□ 0.36
CCT3-206ENST00000368262 SRPK2P78362 688 aaKnown RBP17.27■□□□□ 0.36
CCT3-206ENST00000368262 PKP1Q13835 747 aa17.27■□□□□ 0.36
CCT3-206ENST00000368262 ST18O60284 1047 aa17.26■□□□□ 0.35
CCT3-206ENST00000368262 ATP7BP35670 1465 aa17.26■□□□□ 0.35
CCT3-206ENST00000368262 CDK12Q9NYV4 1490 aaPredicted RBP17.26■□□□□ 0.35
CCT3-206ENST00000368262 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
CCT3-206ENST00000368262 TMEM131LA2VDJ0 1609 aa17.26■□□□□ 0.35
CCT3-206ENST00000368262 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
CCT3-206ENST00000368262 MBD3O95983 291 aa17.25■□□□□ 0.35
CCT3-206ENST00000368262 NCLP19338 710 aaKnown RBP17.25■□□□□ 0.35
CCT3-206ENST00000368262 HDGFL2Q7Z4V5 671 aaPredicted RBP17.25■□□□□ 0.35
CCT3-206ENST00000368262 ANKRD44Q8N8A2 993 aa17.25■□□□□ 0.35
CCT3-206ENST00000368262 UQCRHLA0A096LP55 91 aa17.25■□□□□ 0.35
CCT3-206ENST00000368262 PRPF40AO75400 957 aaKnown RBP17.25■□□□□ 0.35
CCT3-206ENST00000368262 UQCRHP07919 91 aa17.25■□□□□ 0.35
CCT3-206ENST00000368262 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
CCT3-206ENST00000368262 TMEM63CQ9P1W3 806 aa17.25■□□□□ 0.35
CCT3-206ENST00000368262 RGS12O14924 1447 aa17.24■□□□□ 0.35
CCT3-206ENST00000368262 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
CCT3-206ENST00000368262 SASS6Q6UVJ0 657 aa17.24■□□□□ 0.35
CCT3-206ENST00000368262 RBM27Q9P2N5 1060 aaKnown RBP17.24■□□□□ 0.35
CCT3-206ENST00000368262 RBM10P98175 930 aaKnown RBP17.23■□□□□ 0.35
CCT3-206ENST00000368262 PHACTR3Q96KR7 559 aa17.23■□□□□ 0.35
CCT3-206ENST00000368262 POLKQ9UBT6 870 aa17.23■□□□□ 0.35
CCT3-206ENST00000368262 PRDM4Q9UKN5 801 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms