RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PPFIBP1Q86W92 1011 aa18.6■□□□□ 0.57
NUCKS1-201ENST00000367142 CDKL5O76039 1030 aa18.6■□□□□ 0.57
NUCKS1-201ENST00000367142 SRCIN1Q9C0H9 1055 aa18.6■□□□□ 0.57
NUCKS1-201ENST00000367142 WIZO95785 1651 aa18.6■□□□□ 0.57
NUCKS1-201ENST00000367142 RABEP1Q15276 862 aa18.6■□□□□ 0.57
NUCKS1-201ENST00000367142 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
NUCKS1-201ENST00000367142 GOLGA6L10A6NI86 522 aa18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 SERPINC1P01008 464 aa18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 SIL1Q9H173 461 aa18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 CEBPZQ03701 1054 aaKnown RBP18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 CCDC181Q5TID7 509 aa18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 RAI14Q9P0K7 980 aa18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 IGHMBP2P38935 993 aaKnown RBP18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 NASPP49321 788 aaPredicted RBP18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
NUCKS1-201ENST00000367142 MYL6BP14649 208 aa18.58■□□□□ 0.57
NUCKS1-201ENST00000367142 CCDC7Q96M83 1385 aa18.58■□□□□ 0.57
NUCKS1-201ENST00000367142 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.57
NUCKS1-201ENST00000367142 UBAC1Q9BSL1 405 aa18.58■□□□□ 0.56
NUCKS1-201ENST00000367142 TDO2P48775 406 aa18.58■□□□□ 0.56
NUCKS1-201ENST00000367142 LRRCC1Q9C099 1032 aa18.58■□□□□ 0.56
NUCKS1-201ENST00000367142 ANKLE2Q86XL3 938 aa18.58■□□□□ 0.56
NUCKS1-201ENST00000367142 EXOSC9Q06265 439 aaKnown RBP18.57■□□□□ 0.56
NUCKS1-201ENST00000367142 SEPT11Q9NVA2 429 aaKnown RBP18.57■□□□□ 0.56
NUCKS1-201ENST00000367142 RNF214Q8ND24 703 aa18.56■□□□□ 0.56
NUCKS1-201ENST00000367142 CTNNA3Q9UI47 895 aa18.56■□□□□ 0.56
NUCKS1-201ENST00000367142 AXDND1Q5T1B0 1012 aaPredicted RBP18.56■□□□□ 0.56
NUCKS1-201ENST00000367142 BCL11BQ9C0K0 894 aaPredicted RBP18.56■□□□□ 0.56
NUCKS1-201ENST00000367142 SSBP05455 408 aaKnown RBP eCLIP18.56■□□□□ 0.56
NUCKS1-201ENST00000367142 FKBP4Q02790 459 aaKnown RBP eCLIP18.56■□□□□ 0.56
NUCKS1-201ENST00000367142 TNIP1Q15025 636 aa18.56■□□□□ 0.56
NUCKS1-201ENST00000367142 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
NUCKS1-201ENST00000367142 SULT6B1Q6IMI4 303 aa18.55■□□□□ 0.56
NUCKS1-201ENST00000367142 EZRP15311 586 aaKnown RBP18.55■□□□□ 0.56
NUCKS1-201ENST00000367142 STK3Q13188 491 aa18.55■□□□□ 0.56
NUCKS1-201ENST00000367142 BICDL1Q6ZP65 573 aa18.55■□□□□ 0.56
NUCKS1-201ENST00000367142 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
NUCKS1-201ENST00000367142 FIBPO43427 364 aa18.55■□□□□ 0.56
NUCKS1-201ENST00000367142 MRE11P49959 708 aa18.55■□□□□ 0.56
NUCKS1-201ENST00000367142 ENOX2Q16206 610 aaKnown RBP18.55■□□□□ 0.56
NUCKS1-201ENST00000367142 CBFA2T2O43439 604 aa18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 CCDC97Q96F63 343 aaPredicted RBP18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 POGZQ7Z3K3 1410 aa18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 WASF1Q92558 559 aa18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 CFAP70Q5T0N1 1121 aa18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 C1orf115Q9H7X2 142 aa18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 POTEJP0CG39 1038 aa18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 IBSPP21815 317 aaPredicted RBP18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 ME1P48163 572 aa18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
NUCKS1-201ENST00000367142 FGD6Q6ZV73 1430 aa18.53■□□□□ 0.56
NUCKS1-201ENST00000367142 TSPYL1Q9H0U9 437 aa18.53■□□□□ 0.56
NUCKS1-201ENST00000367142 ZNF287Q9HBT7 754 aa18.53■□□□□ 0.56
NUCKS1-201ENST00000367142 CEP126Q9P2H0 1117 aa18.53■□□□□ 0.56
NUCKS1-201ENST00000367142 LRP2BPQ9P2M1 347 aa18.53■□□□□ 0.56
NUCKS1-201ENST00000367142 CAVIN1Q6NZI2 390 aaKnown RBP18.53■□□□□ 0.56
NUCKS1-201ENST00000367142 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
NUCKS1-201ENST00000367142 CT47B1P0C2W7 299 aaPredicted RBP18.53■□□□□ 0.56
NUCKS1-201ENST00000367142 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
NUCKS1-201ENST00000367142 PPP4R3AQ6IN85 833 aa18.52■□□□□ 0.56
NUCKS1-201ENST00000367142 AACSQ86V21 672 aa18.52■□□□□ 0.56
NUCKS1-201ENST00000367142 ZNF652Q9Y2D9 606 aa18.52■□□□□ 0.56
NUCKS1-201ENST00000367142 BTBD11A6QL63 1104 aa18.52■□□□□ 0.56
NUCKS1-201ENST00000367142 GBP2P32456 591 aaPredicted RBP18.52■□□□□ 0.55
NUCKS1-201ENST00000367142 SCLT1Q96NL6 688 aa18.52■□□□□ 0.55
NUCKS1-201ENST00000367142 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.55
NUCKS1-201ENST00000367142 STARD3NLO95772 234 aa18.51■□□□□ 0.55
NUCKS1-201ENST00000367142 RTEL1-TNFRSF6BF6WH68 1400 aa18.51■□□□□ 0.55
NUCKS1-201ENST00000367142 PPP2R1AP30153 589 aa18.51■□□□□ 0.55
NUCKS1-201ENST00000367142 USP5P45974 858 aa18.51■□□□□ 0.55
NUCKS1-201ENST00000367142 CCDC192P0DO97 292 aa18.5■□□□□ 0.55
NUCKS1-201ENST00000367142 TNMDQ9H2S6 317 aa18.5■□□□□ 0.55
NUCKS1-201ENST00000367142 FGD5Q6ZNL6 1462 aa18.5■□□□□ 0.55
NUCKS1-201ENST00000367142 IQCEQ6IPM2 695 aa18.5■□□□□ 0.55
NUCKS1-201ENST00000367142 CEP57L1Q8IYX8 460 aa18.5■□□□□ 0.55
NUCKS1-201ENST00000367142 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
NUCKS1-201ENST00000367142 LEKR1Q6ZMV7 388 aa18.5■□□□□ 0.55
NUCKS1-201ENST00000367142 VSIG10Q8N0Z9 540 aa18.5■□□□□ 0.55
NUCKS1-201ENST00000367142 PDZRN3Q9UPQ7 1066 aa18.49■□□□□ 0.55
NUCKS1-201ENST00000367142 GOLGA6L7A0A1B0GV03 622 aa18.49■□□□□ 0.55
NUCKS1-201ENST00000367142 JAKMIP3Q5VZ66 844 aa18.49■□□□□ 0.55
NUCKS1-201ENST00000367142 AFAP1Q8N556 730 aa18.49■□□□□ 0.55
NUCKS1-201ENST00000367142 PPP1R12BO60237 982 aaPredicted RBP18.49■□□□□ 0.55
NUCKS1-201ENST00000367142 MAP4K4O95819 1239 aaPredicted RBP18.49■□□□□ 0.55
NUCKS1-201ENST00000367142 CRACR2BQ8N4Y2 399 aaPredicted RBP18.49■□□□□ 0.55
NUCKS1-201ENST00000367142 ZPR1O75312 459 aa18.48■□□□□ 0.55
NUCKS1-201ENST00000367142 AIDAQ96BJ3 306 aa18.48■□□□□ 0.55
NUCKS1-201ENST00000367142 CABP1Q9NZU7 370 aa18.48■□□□□ 0.55
NUCKS1-201ENST00000367142 SEC63Q9UGP8 760 aaKnown RBP18.48■□□□□ 0.55
NUCKS1-201ENST00000367142 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
NUCKS1-201ENST00000367142 KRT85P78386 507 aa18.48■□□□□ 0.55
NUCKS1-201ENST00000367142 FANCIQ9NVI1 1328 aa18.48■□□□□ 0.55
NUCKS1-201ENST00000367142 CEP131Q9UPN4 1083 aa18.48■□□□□ 0.55
NUCKS1-201ENST00000367142 KRT32Q14532 448 aa18.47■□□□□ 0.55
NUCKS1-201ENST00000367142 MTERF4Q7Z6M4 381 aaKnown RBP18.47■□□□□ 0.55
NUCKS1-201ENST00000367142 BLOC1S2Q6QNY1 142 aa18.47■□□□□ 0.55
NUCKS1-201ENST00000367142 SSR1P43307 286 aaKnown RBP18.47■□□□□ 0.55
NUCKS1-201ENST00000367142 PPM1FP49593 454 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms