RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 C11orf95C9JLR9 678 aaPredicted RBP11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 SOX12O15370 315 aa11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 KCNH5Q8NCM2 988 aa11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 CAMKK2Q96RR4 588 aa11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 CARD11Q9BXL7 1154 aa11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 SBNO2Q9Y2G9 1366 aa11.64□□□□□ -0.55
RNU4-59P-201ENST00000364447 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
RNU4-59P-201ENST00000364447 SBF2Q86WG5 1849 aa11.63□□□□□ -0.55
RNU4-59P-201ENST00000364447 WDR17Q8IZU2 1322 aa11.62□□□□□ -0.55
RNU4-59P-201ENST00000364447 NFAT5O94916 1531 aa11.62□□□□□ -0.55
RNU4-59P-201ENST00000364447 DDB1Q16531 1140 aa11.62□□□□□ -0.55
RNU4-59P-201ENST00000364447 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
RNU4-59P-201ENST00000364447 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
RNU4-59P-201ENST00000364447 ABCC6O95255 1503 aa11.61□□□□□ -0.55
RNU4-59P-201ENST00000364447 CSB-PGBD3P0DP91 1061 aa11.61□□□□□ -0.55
RNU4-59P-201ENST00000364447 ARHGEF25Q86VW2 580 aa11.61□□□□□ -0.55
RNU4-59P-201ENST00000364447 AXIN2Q9Y2T1 843 aa11.61□□□□□ -0.55
RNU4-59P-201ENST00000364447 USP54Q70EL1 1684 aa11.61□□□□□ -0.55
RNU4-59P-201ENST00000364447 LTN1O94822 1766 aa11.61□□□□□ -0.55
RNU4-59P-201ENST00000364447 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
RNU4-59P-201ENST00000364447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.6□□□□□ -0.55
RNU4-59P-201ENST00000364447 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
RNU4-59P-201ENST00000364447 HDGFL2Q7Z4V5 671 aaPredicted RBP11.59□□□□□ -0.55
RNU4-59P-201ENST00000364447 TMC1Q8TDI8 760 aa11.59□□□□□ -0.55
RNU4-59P-201ENST00000364447 CARD10Q9BWT7 1032 aa11.58□□□□□ -0.56
RNU4-59P-201ENST00000364447 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
RNU4-59P-201ENST00000364447 CCDC7Q96M83 1385 aa11.57□□□□□ -0.56
RNU4-59P-201ENST00000364447 TERF2IPQ9NYB0 399 aa11.57□□□□□ -0.56
RNU4-59P-201ENST00000364447 EDC4Q6P2E9 1401 aaKnown RBP11.57□□□□□ -0.56
RNU4-59P-201ENST00000364447 USP31Q70CQ4 1352 aa11.56□□□□□ -0.56
RNU4-59P-201ENST00000364447 NME9Q86XW9 330 aa11.56□□□□□ -0.56
RNU4-59P-201ENST00000364447 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
RNU4-59P-201ENST00000364447 TNS2Q63HR2 1409 aa11.55□□□□□ -0.56
RNU4-59P-201ENST00000364447 EXOC5O00471 708 aa11.55□□□□□ -0.56
RNU4-59P-201ENST00000364447 PLSCR1O15162 318 aa11.55□□□□□ -0.56
RNU4-59P-201ENST00000364447 MARCH10Q8NA82 808 aaPredicted RBP11.55□□□□□ -0.56
RNU4-59P-201ENST00000364447 SLC12A5Q9H2X9 1139 aa11.55□□□□□ -0.56
RNU4-59P-201ENST00000364447 A0A1W2PP64 1363 aa11.54□□□□□ -0.56
RNU4-59P-201ENST00000364447 BCL9O00512 1426 aa11.54□□□□□ -0.56
RNU4-59P-201ENST00000364447 NLRP2Q9NX02 1062 aa11.54□□□□□ -0.56
RNU4-59P-201ENST00000364447 ERBB3P21860 1342 aa11.54□□□□□ -0.56
RNU4-59P-201ENST00000364447 NINLQ9Y2I6 1382 aa11.54□□□□□ -0.56
RNU4-59P-201ENST00000364447 NHSQ6T4R5 1651 aa11.53□□□□□ -0.56
RNU4-59P-201ENST00000364447 FAM208AQ9UK61 1670 aaKnown RBP11.53□□□□□ -0.56
RNU4-59P-201ENST00000364447 PUS7Q96PZ0 661 aaKnown RBP11.53□□□□□ -0.56
RNU4-59P-201ENST00000364447 SPON1Q9HCB6 807 aa11.53□□□□□ -0.56
RNU4-59P-201ENST00000364447 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
RNU4-59P-201ENST00000364447 PTF1AQ7RTS3 328 aa11.52□□□□□ -0.57
RNU4-59P-201ENST00000364447 ANKRD24Q8TF21 1146 aa11.52□□□□□ -0.57
RNU4-59P-201ENST00000364447 PPP1R1BQ9UD71 204 aaPredicted RBP11.52□□□□□ -0.57
RNU4-59P-201ENST00000364447 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
RNU4-59P-201ENST00000364447 KAT6BQ8WYB5 2073 aa11.51□□□□□ -0.57
RNU4-59P-201ENST00000364447 CASZ1Q86V15 1759 aa11.51□□□□□ -0.57
RNU4-59P-201ENST00000364447 KCNQ2O43526 872 aa11.5□□□□□ -0.57
RNU4-59P-201ENST00000364447 IL2RBP14784 551 aa11.5□□□□□ -0.57
RNU4-59P-201ENST00000364447 TESK2Q96S53 571 aa11.5□□□□□ -0.57
RNU4-59P-201ENST00000364447 ANO8Q9HCE9 1232 aaPredicted RBP11.5□□□□□ -0.57
RNU4-59P-201ENST00000364447 BTAF1O14981 1849 aa11.49□□□□□ -0.57
RNU4-59P-201ENST00000364447 TRIM26Q12899 539 aaPredicted RBP11.49□□□□□ -0.57
RNU4-59P-201ENST00000364447 COG3Q96JB2 828 aa11.49□□□□□ -0.57
RNU4-59P-201ENST00000364447 TXNRD1Q16881 649 aa11.48□□□□□ -0.57
RNU4-59P-201ENST00000364447 ACSBG1Q96GR2 724 aa11.48□□□□□ -0.57
RNU4-59P-201ENST00000364447 STK32BQ9NY57 414 aa11.48□□□□□ -0.57
RNU4-59P-201ENST00000364447 KIF20BQ96Q89 1820 aa11.47□□□□□ -0.57
RNU4-59P-201ENST00000364447 ANKRD36BQ8N2N9 1353 aa11.47□□□□□ -0.57
RNU4-59P-201ENST00000364447 PROM2Q8N271 834 aa11.47□□□□□ -0.57
RNU4-59P-201ENST00000364447 IP6K1Q92551 441 aa11.47□□□□□ -0.57
RNU4-59P-201ENST00000364447 LTV1Q96GA3 475 aaPredicted RBP11.47□□□□□ -0.57
RNU4-59P-201ENST00000364447 RGPD2P0DJD1 1756 aa11.46□□□□□ -0.57
RNU4-59P-201ENST00000364447 USP47Q96K76 1375 aa11.46□□□□□ -0.57
RNU4-59P-201ENST00000364447 DCAF8L1A6NGE4 600 aa11.46□□□□□ -0.57
RNU4-59P-201ENST00000364447 AMPHP49418 695 aa11.46□□□□□ -0.57
RNU4-59P-201ENST00000364447 TMF1P82094 1093 aa11.46□□□□□ -0.57
RNU4-59P-201ENST00000364447 MYOM1P52179 1685 aa11.46□□□□□ -0.58
RNU4-59P-201ENST00000364447 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
RNU4-59P-201ENST00000364447 ZBTB7AO95365 584 aa11.45□□□□□ -0.58
RNU4-59P-201ENST00000364447 DOT1LQ8TEK3 1739 aa11.44□□□□□ -0.58
RNU4-59P-201ENST00000364447 HOXC9P31274 260 aa11.44□□□□□ -0.58
RNU4-59P-201ENST00000364447 SLC15A2Q16348 729 aa11.44□□□□□ -0.58
RNU4-59P-201ENST00000364447 DDX54Q8TDD1 881 aaKnown RBP11.44□□□□□ -0.58
RNU4-59P-201ENST00000364447 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
RNU4-59P-201ENST00000364447 PAPPAQ13219 1627 aa11.44□□□□□ -0.58
RNU4-59P-201ENST00000364447 SMG6Q86US8 1419 aaKnown RBP11.43□□□□□ -0.58
RNU4-59P-201ENST00000364447 RTL1A6NKG5 1358 aa11.43□□□□□ -0.58
RNU4-59P-201ENST00000364447 CDCA8Q53HL2 280 aa11.43□□□□□ -0.58
RNU4-59P-201ENST00000364447 SHANK3Q9BYB0 1731 aa11.43□□□□□ -0.58
RNU4-59P-201ENST00000364447 GGNBP2Q9H3C7 697 aa11.42□□□□□ -0.58
RNU4-59P-201ENST00000364447 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
RNU4-59P-201ENST00000364447 FBLN1P23142 703 aa11.41□□□□□ -0.58
RNU4-59P-201ENST00000364447 YY1P25490 414 aa11.41□□□□□ -0.58
RNU4-59P-201ENST00000364447 RRS1Q15050 365 aaKnown RBP11.41□□□□□ -0.58
RNU4-59P-201ENST00000364447 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
RNU4-59P-201ENST00000364447 MTFR1LQ9H019 292 aa11.41□□□□□ -0.58
RNU4-59P-201ENST00000364447 MEGF6O75095 1541 aa11.4□□□□□ -0.58
RNU4-59P-201ENST00000364447 FYB1O15117 783 aa11.4□□□□□ -0.58
RNU4-59P-201ENST00000364447 PTGER2P43116 358 aa11.4□□□□□ -0.58
RNU4-59P-201ENST00000364447 QSER1Q2KHR3 1735 aa11.4□□□□□ -0.58
RNU4-59P-201ENST00000364447 LY75O60449 1722 aa11.39□□□□□ -0.59
RNU4-59P-201ENST00000364447 SLC27A3Q5K4L6 730 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms