RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CFAP70Q5T0N1 1121 aa8.35□□□□□ -1.07
RNU6-560P-201ENST00000364007 VASH1Q7L8A9 365 aaPredicted RBP8.35□□□□□ -1.07
RNU6-560P-201ENST00000364007 KCTD15Q96SI1 283 aaPredicted RBP8.35□□□□□ -1.07
RNU6-560P-201ENST00000364007 SKIP12755 728 aa8.34□□□□□ -1.07
RNU6-560P-201ENST00000364007 LMOD1P29536 600 aaPredicted RBP8.34□□□□□ -1.07
RNU6-560P-201ENST00000364007 RAB15P59190 212 aa8.34□□□□□ -1.07
RNU6-560P-201ENST00000364007 RNF135Q8IUD6 432 aa8.34□□□□□ -1.07
RNU6-560P-201ENST00000364007 ZNF592Q92610 1267 aa8.34□□□□□ -1.07
RNU6-560P-201ENST00000364007 CCDC85AQ96PX6 553 aaPredicted RBP8.34□□□□□ -1.07
RNU6-560P-201ENST00000364007 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
RNU6-560P-201ENST00000364007 ESPNB1AK53 854 aa8.33□□□□□ -1.08
RNU6-560P-201ENST00000364007 TNFRSF10AO00220 468 aa8.33□□□□□ -1.08
RNU6-560P-201ENST00000364007 ATP9BO43861 1147 aa8.33□□□□□ -1.08
RNU6-560P-201ENST00000364007 GDF9O60383 454 aa8.33□□□□□ -1.08
RNU6-560P-201ENST00000364007 GRM5P41594 1212 aa8.33□□□□□ -1.08
RNU6-560P-201ENST00000364007 NBPF20Q3BBV1 942 aa8.32□□□□□ -1.08
RNU6-560P-201ENST00000364007 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
RNU6-560P-201ENST00000364007 CDV3Q9UKY7 258 aaKnown RBP8.32□□□□□ -1.08
RNU6-560P-201ENST00000364007 MAP4K5Q9Y4K4 846 aa8.32□□□□□ -1.08
RNU6-560P-201ENST00000364007 MAFBQ9Y5Q3 323 aaPredicted RBP8.32□□□□□ -1.08
RNU6-560P-201ENST00000364007 CDCA8Q53HL2 280 aa8.31□□□□□ -1.08
RNU6-560P-201ENST00000364007 INTS6LQ5JSJ4 861 aaKnown RBP8.31□□□□□ -1.08
RNU6-560P-201ENST00000364007 TRIM67Q6ZTA4 783 aa8.31□□□□□ -1.08
RNU6-560P-201ENST00000364007 MPNDQ8N594 471 aa8.31□□□□□ -1.08
RNU6-560P-201ENST00000364007 CDCA7Q9BWT1 371 aaPredicted RBP8.31□□□□□ -1.08
RNU6-560P-201ENST00000364007 CHIC2Q9UKJ5 165 aa8.31□□□□□ -1.08
RNU6-560P-201ENST00000364007 ALDH1A1P00352 501 aa8.3□□□□□ -1.08
RNU6-560P-201ENST00000364007 TRAF7Q6Q0C0 670 aa8.3□□□□□ -1.08
RNU6-560P-201ENST00000364007 PLPP7Q8NBV4 271 aa8.3□□□□□ -1.08
RNU6-560P-201ENST00000364007 NFATC2IPQ8NCF5 419 aa8.3□□□□□ -1.08
RNU6-560P-201ENST00000364007 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.29□□□□□ -1.08
RNU6-560P-201ENST00000364007 USP17L5A8MUK1 530 aa8.29□□□□□ -1.08
RNU6-560P-201ENST00000364007 J3QL48 77 aa8.29□□□□□ -1.08
RNU6-560P-201ENST00000364007 FSHRP23945 695 aa8.29□□□□□ -1.08
RNU6-560P-201ENST00000364007 SRPK2P78362 688 aaKnown RBP8.29□□□□□ -1.08
RNU6-560P-201ENST00000364007 RNF20Q5VTR2 975 aa8.29□□□□□ -1.08
RNU6-560P-201ENST00000364007 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
RNU6-560P-201ENST00000364007 TMPRSS4Q9NRS4 437 aa8.29□□□□□ -1.08
RNU6-560P-201ENST00000364007 USP17L3A6NCW0 530 aa8.28□□□□□ -1.08
RNU6-560P-201ENST00000364007 USP17L4A6NCW7 530 aa8.28□□□□□ -1.08
RNU6-560P-201ENST00000364007 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
RNU6-560P-201ENST00000364007 ADH1CP00326 375 aa8.28□□□□□ -1.08
RNU6-560P-201ENST00000364007 NR3C2P08235 984 aa8.28□□□□□ -1.08
RNU6-560P-201ENST00000364007 USP17L2Q6R6M4 530 aa8.28□□□□□ -1.08
RNU6-560P-201ENST00000364007 USP17L1Q7RTZ2 530 aa8.28□□□□□ -1.08
RNU6-560P-201ENST00000364007 SEPT12Q8IYM1 358 aa8.28□□□□□ -1.08
RNU6-560P-201ENST00000364007 PCDHB11Q9Y5F2 797 aa8.28□□□□□ -1.08
RNU6-560P-201ENST00000364007 NCOA4Q13772 614 aa8.27□□□□□ -1.09
RNU6-560P-201ENST00000364007 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.09
RNU6-560P-201ENST00000364007 OXLD1Q5BKU9 147 aa8.27□□□□□ -1.09
RNU6-560P-201ENST00000364007 KANK4Q5T7N3 995 aaPredicted RBP8.27□□□□□ -1.09
RNU6-560P-201ENST00000364007 CYP4X1Q8N118 509 aa8.27□□□□□ -1.09
RNU6-560P-201ENST00000364007 TOR4AQ9NXH8 423 aa8.27□□□□□ -1.09
RNU6-560P-201ENST00000364007 DOLKQ9UPQ8 538 aa8.27□□□□□ -1.09
RNU6-560P-201ENST00000364007 TTC24A2A3L6 582 aaPredicted RBP8.26□□□□□ -1.09
RNU6-560P-201ENST00000364007 NR5A1Q13285 461 aa8.26□□□□□ -1.09
RNU6-560P-201ENST00000364007 PLEKHM2Q8IWE5 1019 aa8.26□□□□□ -1.09
RNU6-560P-201ENST00000364007 RGS20O76081 388 aa8.25□□□□□ -1.09
RNU6-560P-201ENST00000364007 NNTQ13423 1086 aa8.25□□□□□ -1.09
RNU6-560P-201ENST00000364007 PPP1R26Q5T8A7 1209 aaPredicted RBP8.25□□□□□ -1.09
RNU6-560P-201ENST00000364007 CCDC116Q8IYX3 515 aa8.25□□□□□ -1.09
RNU6-560P-201ENST00000364007 MKRN1Q9UHC7 482 aaKnown RBP8.25□□□□□ -1.09
RNU6-560P-201ENST00000364007 WASF2Q9Y6W5 498 aa8.25□□□□□ -1.09
RNU6-560P-201ENST00000364007 SMPD1P17405 629 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 SCTRP47872 440 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 PRR20EP86478 221 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 PRR20CP86479 221 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 PRR20DP86480 221 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 PRR20BP86481 221 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 PRR20AP86496 221 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 EML3Q32P44 896 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 PBXIP1Q96AQ6 731 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 VRTNQ9H8Y1 702 aa8.24□□□□□ -1.09
RNU6-560P-201ENST00000364007 LZTS3O60299 673 aaPredicted RBP8.23□□□□□ -1.09
RNU6-560P-201ENST00000364007 CYLDQ9NQC7 956 aa8.23□□□□□ -1.09
RNU6-560P-201ENST00000364007 DHX9Q08211 1270 aaKnown RBP8.22□□□□□ -1.09
RNU6-560P-201ENST00000364007 ZNF784Q8NCA9 323 aaPredicted RBP8.22□□□□□ -1.09
RNU6-560P-201ENST00000364007 PDZRN3Q9UPQ7 1066 aa8.22□□□□□ -1.09
RNU6-560P-201ENST00000364007 NOD1Q9Y239 953 aa8.22□□□□□ -1.09
RNU6-560P-201ENST00000364007 PPP1R15AO75807 674 aaPredicted RBP8.21□□□□□ -1.1
RNU6-560P-201ENST00000364007 ADD1P35611 737 aaKnown RBP8.21□□□□□ -1.1
RNU6-560P-201ENST00000364007 USP4Q13107 963 aa8.21□□□□□ -1.1
RNU6-560P-201ENST00000364007 CCDC125Q86Z20 511 aa8.21□□□□□ -1.1
RNU6-560P-201ENST00000364007 HPS1Q92902 700 aa8.21□□□□□ -1.1
RNU6-560P-201ENST00000364007 KLF16Q9BXK1 252 aaPredicted RBP8.21□□□□□ -1.1
RNU6-560P-201ENST00000364007 ZBTB7BO15156 539 aaPredicted RBP8.2□□□□□ -1.1
RNU6-560P-201ENST00000364007 LILRA1O75019 489 aa8.2□□□□□ -1.1
RNU6-560P-201ENST00000364007 ERVK-9P63128 1117 aa8.2□□□□□ -1.1
RNU6-560P-201ENST00000364007 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
RNU6-560P-201ENST00000364007 ITPKCQ96DU7 683 aa8.2□□□□□ -1.1
RNU6-560P-201ENST00000364007 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
RNU6-560P-201ENST00000364007 ACIN1Q9UKV3 1341 aaKnown RBP8.2□□□□□ -1.1
RNU6-560P-201ENST00000364007 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 RASA1P20936 1047 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 CLDN10P78369 228 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 MYT1Q01538 1121 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 CBLBQ13191 982 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 CC2D2BQ6DHV5 1058 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 OGFOD1Q8N543 542 aa8.19□□□□□ -1.1
RNU6-560P-201ENST00000364007 ARXQ96QS3 562 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms